Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01045 ATGCAGGCAGATCATTCGGCGATAAGCTTGAGACCAGGTGGCGGTAGTGGCTTTCGTGGCTCAAAATTCTTCACTCCTCGATTCGAATCTTCTTCCTCCGGCGCTCCTACCTTGCATTCTTATGGCGGCGCCGCACCTGCCCTCAAGAGTGGAGACTTACGTTTTGAAGGACAGGAGCGGGTCATGTACACCCGAGATCAGCTGTTGCAACTTAGAGAGGTTAAAACTGTTTATGAAGATATTTTGAAGATAAAACAAGAAATTGATGCTGAGTTTTTGGTGGAGGATCAATCTTGGGCTCATGCAAATCAGCAACTTCCACCCCAAGGTCATTTTTCTGATCTTGATAACCGCGATTGGCGTGGTCGGTCTGCACAATTGCCTGCTTTTGGGGAAGAGAGATCTTGGAATGACAATAAGGAGCTGATGCCTCGAGATATTAGTGGTCAACAAGATCAATTAAATACCCAGTTTGCTGGGGCACTAATTTCTAGTCAAGGGTTTTTATTTTTAATGCAATACATATTATGTGGTCATTCTTCAAATTATTGGATATATCTAGAATCTGTACTATATTCTGGTGTTATCTCGCTTATATTTGAGAAGGCTGTGCTGGAACCAACATTTTGTCCCATGTATGCACTTTTATGCTCTCATCTTAATGACAAGCTTCCTCCATTCCCATCTGATGAGCCTGGTGGGAAGGATATCACTTTTAAACGAGTACTGTTGGATATTTGTCAAGAGGCATTTGAAAATGCTGACAATCTAAGGGCAGAAATTAGGCAGATGGCGGATCCTAAGCTAGATGCTGAACGTAGAGATAAGGAAAGAATGGTTAAACTGCGAACTCTTGGAAACATACGCCTCATAGGTGAACTATTGAAGCAGAAGATGGTGTCTGAAAAAATTGTCCACCACATTGTTAAGGAGCTTTTGGGATCTGAAGGTAAATCATGTCCCGCTGAGGAGAATGTTGAGGCTATATGTCAATTTTTTAGCACCATTGGTAAGCAGCTAGATGAGGGTCCAAAATCTCGAAGAGTCAATGATTTGTATTTTAGGAGGTTGAAGGAGCTGACTACAAACATTCAACTTGCGCCTAGATTGAGGTTTATGGTCCATGATGTTGTTGATTTGCGGGCTAACAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCAATGACTATTACTGAAATTCATAAGGAAGCAGAAAAGAATTTAGGATTGCGTCCTGGTTCAACAGCTGTAATGAGAAATGGTCGTAATGCTACAGTCATTGGGGAAATGAGCCCTGCAGGGATAATGCCTGGGAGACCTGGCTCTGGTGGTTTAATGCCTGGAATGCCTGGGACCAGAAGGATGCCTGGTATGCCTGGTTTTGATGATGATAATTGGGAGGTTCCACGATCTCGATCGAAAGCAAGAAATGATGGTCCTATACAATCTGTTGGACGTGGGCAGCCTCAATTGATTAGCAAAACACCATCTCTGAATTCAAAATTTCTTCCTCAGGGCAGTGGTGGTATCATAACAGGGAAAACAAGCGTCTTACTGCAGGGTAGTCATGTCCACCCTTCGTCCCATTCTACTACTATTGCTAGAATAGATGCTCCAATTACCCACAACCCTAAGCCTGTTGCTACAACTGTTTCAGTTGTGTCTTATCCTGAGAAGTCAGTTGTTCCCTCAACAAGGTCTAATCCTGCTGATCTTCATAAGAAAACTGTTTCACTGCTGAAGGAATATTTCAGTGTTCGAATTCTTGATGAAGCTCTGCAGTGTGTGGAGGAGTTGAAAACCCCTTCCTATCACCCGGAGGTTGTTAAAGAAGCGGTTGCCCTCGCACTAGAAATGATTCCACCATGTGTGGAGCCCGTCACAAAGCTCCTCGAACACTTGCTCACCAAAAAGACATTGACTGCTCCAGACATAGGGTCCGGGTGCCTTCTTTATGGGTCAATGATGGATGACATTGGCATCGATTTGCCTAAAGCTCCAAATAATTTCGGTGAGATTCTAGGAAGGTTGGTCTTAATTGGGGGTTTGAACTTCAAAGTTGTGAAGCAAATTTTGACAAAGGTGGAAGATAACTTTTACCAGTCGTCCATCTTTGGAGGTGTTCTTAAAAGCATAAATTCTAGCCCCTCGGGGCTAGCAATTGCCGAAGATCAGGGTGCCGAGATCAGGGCCTGTGAGAGTATTGTCTCTCAAAAATAG 2220 43.69 MQADHSAISLRPGGGSGFRGSKFFTPRFESSSSGAPTLHSYGGAAPALKSGDLRFEGQERVMYTRDQLLQLREVKTVYEDILKIKQEIDAEFLVEDQSWAHANQQLPPQGHFSDLDNRDWRGRSAQLPAFGEERSWNDNKELMPRDISGQQDQLNTQFAGALISSQGFLFLMQYILCGHSSNYWIYLESVLYSGVISLIFEKAVLEPTFCPMYALLCSHLNDKLPPFPSDEPGGKDITFKRVLLDICQEAFENADNLRAEIRQMADPKLDAERRDKERMVKLRTLGNIRLIGELLKQKMVSEKIVHHIVKELLGSEGKSCPAEENVEAICQFFSTIGKQLDEGPKSRRVNDLYFRRLKELTTNIQLAPRLRFMVHDVVDLRANNWVPRREEVKAMTITEIHKEAEKNLGLRPGSTAVMRNGRNATVIGEMSPAGIMPGRPGSGGLMPGMPGTRRMPGMPGFDDDNWEVPRSRSKARNDGPIQSVGRGQPQLISKTPSLNSKFLPQGSGGIITGKTSVLLQGSHVHPSSHSTTIARIDAPITHNPKPVATTVSVVSYPEKSVVPSTRSNPADLHKKTVSLLKEYFSVRILDEALQCVEELKTPSYHPEVVKEAVALALEMIPPCVEPVTKLLEHLLTKKTLTAPDIGSGCLLYGSMMDDIGIDLPKAPNNFGEILGRLVLIGGLNFKVVKQILTKVEDNFYQSSIFGGVLKSINSSPSGLAIAEDQGAEIRACESIVSQK 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28287825 28292852 + BLOR05064 Blo12g01045 68306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01045 739 SMART if4_15 152 384 IPR003890 GO:0003723|GO:0005515
Blo12g01045 739 MobiDBLite consensus disorder prediction 470 499 - -
Blo12g01045 739 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 166 IPR045208 GO:0003743
Blo12g01045 739 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 192 737 - -
Blo12g01045 739 Pfam MIF4G domain 190 384 IPR003890 GO:0003723|GO:0005515
Blo12g01045 739 ProSiteProfiles MI domain profile. 571 693 IPR003891 -
Blo12g01045 739 SUPERFAMILY ARM repeat 568 723 IPR016024 -
Blo12g01045 739 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 192 737 IPR045208 GO:0003743
Blo12g01045 739 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 1 166 - -
Blo12g01045 739 SUPERFAMILY ARM repeat 192 387 IPR016024 -
Blo12g01045 739 Gene3D - 187 385 - -
Blo12g01045 739 SMART ma3_7 572 684 IPR003891 -
Blo12g01045 739 Gene3D - 567 723 - -
Blo12g01045 739 Pfam MA3 domain 573 683 IPR003891 -
Blo12g01045 739 MobiDBLite consensus disorder prediction 483 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g01045 Blo-Chr12:28287825 Blo14g00603 Blo-Chr14:10434329 0 dispersed
Blo12g01045 Blo-Chr12:28287825 Blo12g00095 Blo-Chr12:7098114 7.32E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01045 K03260 - qsu:112035365 908.286