Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01046 ATGGGTATATACCTTAGCAGCCCCAAAACTGATAAGTTCTCGGAAGATGGTGAAAATGAAAGGCTTAAATATGGGCTATCCTCAATGCAAGGCTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATTTGAATACATCATTTTTCGGTGTTTATGATGGTCATGGAGGTAGGGTAGTTGCCAAATTCTGCAGCAAGTATCTTCACCGACAAGTGCTGAAGAGTGAAGCATATGCTGCTGGAGATATTCGAACTTCTGTTCAGAAAGCATTTCTTAGAATGGATGAAATGATGCAAGGACAAAGGGGTTGGAGAGAATTAGCTGTTTTGGGTGCTAAAATAAACAAGTTTTCTGGGATGATAGAAGGGTTGATTTGGTCTCCAAGAAGCCGAAACAGTAATGGAAATGCCCAAGTTGATGATTGGGCTCCTGAGGAGGGTCCACACTCTGATTTTCCTGGCCCAAACTCAGGGAGCACAGCTTGTGTTGCAATCATCCAAAACACCCGACTTGTGGTCGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAAGGGTCAGGCTTTGAATCTGTCTCAAGATCACAAACCTGATCTAGAGGTTGAGAAGGAAAGAATTTTAAAAGCTGGTGGGTTTATTCACGCAGGCCGAGTCAATGGCAGTTTGAACCTTGCAAGAGCTATTGGCGATGCGGAATTCAAGCAAAATACAACTTTGCCCGTCGAAAGTCAAATTGTAACTGCAAATCCTGATGTAATCACAGTTGAGCTGTGTGAAGACGACGAATTTATAGTGCTTGCATGTGATGGCATCTGGGATTGCATGTCAAGCCAGCAAGTGGTCGATTTTATACACGAACAGCTTAGGACGGAAAGCAAACTATCGGGGGTGTGTGAAAGAGTGCTGGACCGATGCTTAGGCCCGAGAGCAGGGGGCGAGGGGTGCGACAACATGACAATCATCTTTGTCCAGTTTAAGAAGCATCTTCTTCCCAGCTCTTAA 1017 44.84 MGIYLSSPKTDKFSEDGENERLKYGLSSMQGWRATMEDAHAAYPDLDLNTSFFGVYDGHGGRVVAKFCSKYLHRQVLKSEAYAAGDIRTSVQKAFLRMDEMMQGQRGWRELAVLGAKINKFSGMIEGLIWSPRSRNSNGNAQVDDWAPEEGPHSDFPGPNSGSTACVAIIQNTRLVVANAGDSRCVLSRKGQALNLSQDHKPDLEVEKERILKAGGFIHAGRVNGSLNLARAIGDAEFKQNTTLPVESQIVTANPDVITVELCEDDEFIVLACDGIWDCMSSQQVVDFIHEQLRTESKLSGVCERVLDRCLGPRAGGEGCDNMTIIFVQFKKHLLPSS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28294284 28298448 + BLOR05065 Blo12g01046 68307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01046 338 SMART PP2C_4 11 328 IPR001932 -
Blo12g01046 338 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 335 - -
Blo12g01046 338 CDD PP2Cc 23 330 IPR001932 -
Blo12g01046 338 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Blo12g01046 338 PANTHER PROTEIN PHOSPHATASE 2C 1 335 IPR015655 GO:0004722|GO:0006470
Blo12g01046 338 ProSiteProfiles PPM-type phosphatase domain profile. 23 330 IPR001932 -
Blo12g01046 338 Pfam Protein phosphatase 2C 159 313 IPR001932 -
Blo12g01046 338 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Blo12g01046 338 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Blo12g01046 338 Gene3D - 1 331 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g01046 Blo18g00040 CCT
Blo12g01046 Blo18g00040 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00165 Blo-Chr5:1492491 Blo12g01046 Blo-Chr12:28294284 0 dispersed
Blo07g00329 Blo-Chr7:4261195 Blo12g01046 Blo-Chr12:28294284 2.82E-27 dispersed
Blo12g01046 Blo-Chr12:28294284 Blo18g00040 Blo-Chr18:265747 1.18E-41 dispersed
Blo12g01046 Blo-Chr12:28294284 Blo17g00030 Blo-Chr17:170237 5.79E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01046 K17499 - jre:109001007 577.4