Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g01046 | ATGGGTATATACCTTAGCAGCCCCAAAACTGATAAGTTCTCGGAAGATGGTGAAAATGAAAGGCTTAAATATGGGCTATCCTCAATGCAAGGCTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATTTGAATACATCATTTTTCGGTGTTTATGATGGTCATGGAGGTAGGGTAGTTGCCAAATTCTGCAGCAAGTATCTTCACCGACAAGTGCTGAAGAGTGAAGCATATGCTGCTGGAGATATTCGAACTTCTGTTCAGAAAGCATTTCTTAGAATGGATGAAATGATGCAAGGACAAAGGGGTTGGAGAGAATTAGCTGTTTTGGGTGCTAAAATAAACAAGTTTTCTGGGATGATAGAAGGGTTGATTTGGTCTCCAAGAAGCCGAAACAGTAATGGAAATGCCCAAGTTGATGATTGGGCTCCTGAGGAGGGTCCACACTCTGATTTTCCTGGCCCAAACTCAGGGAGCACAGCTTGTGTTGCAATCATCCAAAACACCCGACTTGTGGTCGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAAGGGTCAGGCTTTGAATCTGTCTCAAGATCACAAACCTGATCTAGAGGTTGAGAAGGAAAGAATTTTAAAAGCTGGTGGGTTTATTCACGCAGGCCGAGTCAATGGCAGTTTGAACCTTGCAAGAGCTATTGGCGATGCGGAATTCAAGCAAAATACAACTTTGCCCGTCGAAAGTCAAATTGTAACTGCAAATCCTGATGTAATCACAGTTGAGCTGTGTGAAGACGACGAATTTATAGTGCTTGCATGTGATGGCATCTGGGATTGCATGTCAAGCCAGCAAGTGGTCGATTTTATACACGAACAGCTTAGGACGGAAAGCAAACTATCGGGGGTGTGTGAAAGAGTGCTGGACCGATGCTTAGGCCCGAGAGCAGGGGGCGAGGGGTGCGACAACATGACAATCATCTTTGTCCAGTTTAAGAAGCATCTTCTTCCCAGCTCTTAA | 1017 | 44.84 | MGIYLSSPKTDKFSEDGENERLKYGLSSMQGWRATMEDAHAAYPDLDLNTSFFGVYDGHGGRVVAKFCSKYLHRQVLKSEAYAAGDIRTSVQKAFLRMDEMMQGQRGWRELAVLGAKINKFSGMIEGLIWSPRSRNSNGNAQVDDWAPEEGPHSDFPGPNSGSTACVAIIQNTRLVVANAGDSRCVLSRKGQALNLSQDHKPDLEVEKERILKAGGFIHAGRVNGSLNLARAIGDAEFKQNTTLPVESQIVTANPDVITVELCEDDEFIVLACDGIWDCMSSQQVVDFIHEQLRTESKLSGVCERVLDRCLGPRAGGEGCDNMTIIFVQFKKHLLPSS | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 28294284 | 28298448 | + | BLOR05065 | Blo12g01046 | 68307 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g01046 | 338 | SMART | PP2C_4 | 11 | 328 | IPR001932 | - | |
Blo12g01046 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 335 | - | - | |
Blo12g01046 | 338 | CDD | PP2Cc | 23 | 330 | IPR001932 | - | |
Blo12g01046 | 338 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169 | |
Blo12g01046 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 335 | IPR015655 | GO:0004722|GO:0006470 | |
Blo12g01046 | 338 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 330 | IPR001932 | - | |
Blo12g01046 | 338 | Pfam | Protein phosphatase 2C | 159 | 313 | IPR001932 | - | |
Blo12g01046 | 338 | Pfam | Protein phosphatase 2C | 23 | 103 | IPR001932 | - | |
Blo12g01046 | 338 | SUPERFAMILY | PP2C-like | 3 | 331 | IPR036457 | - | |
Blo12g01046 | 338 | Gene3D | - | 1 | 331 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo12g01046 | Blo18g00040 | CCT | |
Blo12g01046 | Blo18g00040 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo05g00165 | Blo-Chr5:1492491 | Blo12g01046 | Blo-Chr12:28294284 | 0 | dispersed | |
Blo07g00329 | Blo-Chr7:4261195 | Blo12g01046 | Blo-Chr12:28294284 | 2.82E-27 | dispersed | |
Blo12g01046 | Blo-Chr12:28294284 | Blo18g00040 | Blo-Chr18:265747 | 1.18E-41 | dispersed | |
Blo12g01046 | Blo-Chr12:28294284 | Blo17g00030 | Blo-Chr17:170237 | 5.79E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g01046 | K17499 | - | jre:109001007 | 577.4 |