Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01056 ATGGAGGACAGGAATCTTCTGTTTAATAAGTACGAGATTGGGAGGTTATTAGGGAAAGGAACTTTTGCCAAGGTCTATTATGGAAAACACTTGAGCTCCGGCGAGAGTGTGGCGATTAAAGTGATTAGTAAGGATCAAGTGAAGAAGGATGGCATGATGGAGCTAATTACCAGAGAGATCTCCGTTATGCGGCTGGTTCGCCATCCTAATATCGTTGAGCTTAAGGAGGTTATGGCTACCAAGACCAAGATCTTCGTTATCATGGAATATGTCCGCGGCGGCGAGCTTTTCTCGAAGGTTGCTAAAGGAAAGCTTAAAGAAGATCAAGCGAGGAAGTACTTTCAGCAATTGATCAGTGCCGTTGATTTTTGCCATAGCAGGGGAGTTTCTCATCGTGATTTAAAGCCGGAAAATCTTTTATTGGACGAGAATGAGGACCTGAAAATTTCCGATTTCGGCCTTTCGGCCCTGCCGGAACATCTGCGGAACGACGGTCTTCTTCACACGCAGTGCGGTACCCCAGCGTACGTGGCGCCGGAGATTCTGAGGAAAAAAGGCTATGACGGTGGTAAAGCCGATATATGGTCCTGCGGTGTTATTCTCTATGTACTCCTCGCCGGATTTCTTCCGTTTCAGTCTGAAAATCTTACGAAGATGTACACGAAGGTTTTCAAGGCGGAATTTGAGTGTCCACCGTGGTTTTCGACTGAAGCGAAGCGGTTAGTCTCCAAACTCCTCGTCGTCGATCCCGGAAAACGAATAACAATCCCGGCGATTATGCGCGTTCCCTGGTTCCGAAGGGGATTATCGAAGCCATTCGCCTGTTCACCAATAGAAATTCCGGAAAGCAAACCGGAGGAAAAACACGCCAGCGAGAATCCAAAAATATCAACTCCAAAGTTTTTCAATGCCTTCGAGCTCGTCTCTTCCATGTCGACTGGATTCGATTTGTCGAACCTGTTCGAGAACAAGAAAAAGGCAGGGTCGATGTTCACGTCGAGATGTTCGGCGGCGGCGATCATAACGAAGATCGAGGCGGTGGCGAAAGGTCTAAACTTTAATGTTTCAACGGCAAAGGATTTCAAACTGAAATTGCAGGGGCCGTCGGAGGGAAGGAAAGGAAAGCTCTCGGTGACGGCGGAGGTTTTCGAGTCGGCTCCGGAGGTAGCCATCGTAGAATTCTCGAAAACTTCCGGCGACTCGTTGGAATACGCAAAGTTTTGTGAAGAAAAGGTTCGACCGGCATTAAAAGACATAGTGTGGACCTGGCAAGGTGATTGCGTTCCCAAAAGCGAAAAGACAGAGAAGGACGAATTCCGCCATTAA 1326 47.81 MEDRNLLFNKYEIGRLLGKGTFAKVYYGKHLSSGESVAIKVISKDQVKKDGMMELITREISVMRLVRHPNIVELKEVMATKTKIFVIMEYVRGGELFSKVAKGKLKEDQARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENEDLKISDFGLSALPEHLRNDGLLHTQCGTPAYVAPEILRKKGYDGGKADIWSCGVILYVLLAGFLPFQSENLTKMYTKVFKAEFECPPWFSTEAKRLVSKLLVVDPGKRITIPAIMRVPWFRRGLSKPFACSPIEIPESKPEEKHASENPKISTPKFFNAFELVSSMSTGFDLSNLFENKKKAGSMFTSRCSAAAIITKIEAVAKGLNFNVSTAKDFKLKLQGPSEGRKGKLSVTAEVFESAPEVAIVEFSKTSGDSLEYAKFCEEKVRPALKDIVWTWQGDCVPKSEKTEKDEFRH 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28344522 28345847 - BLOR05075 Blo12g01056 68317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01056 441 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Blo12g01056 441 ProSiteProfiles NAF domain profile. 297 322 IPR018451 GO:0007165
Blo12g01056 441 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g01056 441 Pfam NAF domain 299 355 IPR004041 GO:0007165
Blo12g01056 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Blo12g01056 441 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Blo12g01056 441 Gene3D Transferase(Phosphotransferase) domain 1 91 270 - -
Blo12g01056 441 CDD STKc_SnRK3 10 264 - -
Blo12g01056 441 PANTHER - 1 433 - -
Blo12g01056 441 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g01056 441 SUPERFAMILY Protein kinase-like (PK-like) 7 283 IPR011009 -
Blo12g01056 441 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 433 - -
Blo12g01056 441 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g01056 441 Gene3D Kinase associated domain 1, KA1 297 422 - -
Blo12g01056 441 CDD CIPK_C 303 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g01056 Blo-Chr12:28344522 Blo13g01018 Blo-Chr13:32525053 9.07E-168 dispersed
Blo02g00295 Blo-Chr2:2932043 Blo12g01056 Blo-Chr12:28344522 5.45E-58 transposed
Blo02g00575 Blo-Chr2:10593945 Blo12g01056 Blo-Chr12:28344522 1.98E-26 transposed
Blo01g01412 Blo-Chr1:52650189 Blo12g01056 Blo-Chr12:28344522 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84603 PF00069 Pkinase 6.30E-75 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01056 - - csv:101213773 701.819