Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g01078 | ATGAGGGTGTGTCTGTGTTGGGGGCAACCAGCACTGCATCCTGCGAATGCATTTCAGTGCGCCATGTGGCAGTTGTCATCCATCTGGAGGACGCTACGACCTAATAGCCATTTATTCTGGTTGTTAAGAAGCTGTGGTTCTGGTTCTTTGATAGTTGAAGGCTTGGGCAGGAAGCGAAGGGTATGGCTGGGGACATTTGAGACAGCAGAGGCGGCAGCACGTGCTTATGACCAAGCAGCCATATTGATGAGCGGCCACAATGCCAAGACCAATTTTCCTAGCTCAAACAATCAAATTGAAGACTCGAAGAATGGGGATGGATCTCCATTGTCACCAAAGGAACTTTCAGAGCTTCTAAGCACAAAGCTAAGAAAATGCTGCAAAGACCCATCTCCTTCTCTCACGTGCTTGAGGCTCGACAGCGATAATTCTCACATCGGGGTGTGGCAGAAGCGGGCTGGGACTCGTGCAGGCTCCAATTGGGTCATGAGGATCGAGCTTGGGAAGAAAAGTTCGCATCATTCAGAGAATGATCCGCCATTATCGACAGTGGAAACGAAGAGAGGAATGATCGACGGGGAAAACGAAATGGAGGAAGAGGATAGAATTGCAATGCAAATGATTGAGGAGTTGCTTAACTGGAACTGTCCAGTCGAGAAAGGGAGTGAGTCTTCTTCCTCCTCATTTGACCTGTGGAAATAG | 702 | 48.72 | MRVCLCWGQPALHPANAFQCAMWQLSSIWRTLRPNSHLFWLLRSCGSGSLIVEGLGRKRRVWLGTFETAEAAARAYDQAAILMSGHNAKTNFPSSNNQIEDSKNGDGSPLSPKELSELLSTKLRKCCKDPSPSLTCLRLDSDNSHIGVWQKRAGTRAGSNWVMRIELGKKSSHHSENDPPLSTVETKRGMIDGENEMEEEDRIAMQMIEELLNWNCPVEKGSESSSSSFDLWK | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 28493030 | 28494358 | + | BLOR05097 | Blo12g01078 | 68339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g01078 | 233 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 58 | 219 | - | - | |
Blo12g01078 | 233 | Pfam | AP2 domain | 57 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g01078 | 233 | Gene3D | AP2/ERF domain | 13 | 94 | IPR036955 | GO:0003700|GO:0006355 | |
Blo12g01078 | 233 | MobiDBLite | consensus disorder prediction | 92 | 113 | - | - | |
Blo12g01078 | 233 | SMART | rav1_2 | 42 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g01078 | 233 | ProSiteProfiles | AP2/ERF domain profile. | 28 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g01078 | 233 | SUPERFAMILY | DNA-binding domain | 51 | 95 | IPR016177 | GO:0003677 | |
Blo12g01078 | 233 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 | 58 | 219 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g01386 | Blo12g01078 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo10g00571 | Blo-Chr10:16821112 | Blo12g01078 | Blo-Chr12:28493030 | 3.41E-44 | dispersed | |
Blo12g01078 | Blo-Chr12:28493030 | Blo10g00517 | Blo-Chr10:12050628 | 2.31E-13 | dispersed | |
Blo01g01386 | Blo-Chr1:52152465 | Blo12g01078 | Blo-Chr12:28493030 | 1.95E-92 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13098 | PF00847 | AP2 | 1.30E-06 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g01078 | - | - | mcha:111006480 | 225.713 |