Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01100 ATGGCCTCCGTTCCTCGATCCTCCGGACTCCTGCAATCACGATCTGGTGGAAAGATTGTACGAACCAGGCGAACCTTGCGTCCCAGAACTCCCTACGACCGACCCACCCTTTCCACAGGTGGTCATGAGGAAAACCCTAACTGGATCTCAAGGCTCGTTCTCTCACCTACTCTCATGATTGCTACTGGCGCTGGGAAATTATTAACCTCCGTTTTTCGTCACGAATCATCGTCCTCCTCCTCGTCTTCAGGGAGTGATTCAGAGGAAACTGAAGACGGAGACAATGATAATCATGTCACTTTCGAGGGTTTTGAAGCATCCAAGAAGAATCAAACATCAGAAATGGACAGTTCTATTATAAAGGAAGTTCAAGTGGGAAGGAAAAAAACCAAACGTCTTATTGAGCAATTGTTGATGCAGGAGACCTTCTCAAGCAGGGACGAGAGTGATAGATTTATTGAAATTCTTAAATCTAGAGTTATAGAGAGTTCAAACGTGGTAGAAGCAGAGGATGAGAGACTGACTGAGACACCGAAGAAAACAGTTGGCAATGATAGGGTCGATCCTGATCTCTGCAGCACAGCAGTTTTGGAGGCAAGAAAATGGTTAAATGAGAAGATATCTGGATCTAAGCCGAAGTTGGAGTATGAGCAGGGGAATGACATCTCAGATGATGTTGTGAATGAAGAGTTACATTCACCTGTAGACGTGGCAAAATCATATATGCAGGCACGACCTCGTTGGGCGTCTCCTTTCATTAACCATCTTGAGTTAAAATCTCCCCCTTCCGGGATTCAACTATTGATGGAAGAGACAAAATATTCAATTGGTGAAAGTTCACTGCCCACTTCTAAGCTGAGAAAAGAATCCCCTGCCAGTGGATCTTGGAATATCAAGGAGGAACTACGACGAGTACGATCCAAAGCAACAGAAGAGATGCTCAGAAATCTACCCTCCAAAAAATTTGATTGGTCTTCATTTGCTTCAGGCAATAATTGTACTGGAAATTCAATAGGCGTAGATAAACAAAAAACTTGCAGTGGCGAGAAAGGACAAGGCGGTACAAGGACCGCGGATGTACCTTTGACTGACTCTATAGCGATGCCAGTTTTGGATATGATGCACGATGAGTCAGTAGATGGAGCTTTGCTGCCTGATTCAAATGGAGTTATTATTCAACAAAATGAGGATCCACCAACCAATCTGACAATTGAGGGAAAATGTGATCAAGATTTCTCTCCCGTCCCAAGATCATCAAATGGACAAGAAATGCAAAAAATCCACAATAAACTTGCCGAGGAACAAACTTCAAATTTATACAACCATGACAGTATGTGTGCAGCTAAAATGCCTGCTGAGGAGCCGTGTGAGCTTCTAAGTGAAGCTTCAGTTGAGGTCCCAAATGTAAATGAAAGTATTACAGCAGCTGTAAATGATAATGATTGTATGGCCAGCGGCCCTCAGAACAGTACGAGCATGCAATACCATGAATTGCCACAAGAACTGTCGAAGCCAAATACAAGACGAATTACTGCAGGTAGGAGTAATGAAACACTTGATGATCATGCCCAAACTGGAAAGAAAATGACTAGGTCCAACAGAAAAGGAAAGGCCCGGGCTCTAAAATCCGAAACCATGGCGGGAGACAAGGGCATTAGTCTTGAAGAGATTAAAAACGAGGCTGTGGATCTGGAACGTATTCCAATTGAGGAGGTGTTTGAACAATTGAAATGCTCAAGAGAAGGTCTTTCATCCGAGGAAGGAGCCAGTCGGCTTCAAGTTTTTGGTCCAAACAAACTCGAAGAGAAGAAGGAGAGCAAAATTCTCAAGTTTTTGGGCTTTATGTGGAACCCGTTATCCTGGGTCATGGAAGCTGCTGCTATCATGGCTATAGCATTGGCAAATGGAGGTGGAAGGCCTCCTGACTGGCAGGACTTCATAGGGATCATCATCTTACTTTTAATCAACTCTACAATCAGTTTTATAGAAGAAAACAATGCTGGAAATGCGGCTGCAGCTCTTATGGCTGGTCTTGCTCCCAAAACTAAGGTTCTCAGAGATGGTCGATGGAGTGAGCAAGACGCCTCGATTCTAGTCCCGGGAGATATAATCAGCATTAAGCTAGGAGACATTGTTCCTGCTGATGCACGTCTTCTCGAGGGCGATCCCTTGAAAATTGATCAATCTGCTCTGACAGGAGAATCTCTTCCTGTCACCAAGAACCCTTCAGATGAAGTTTTTTCAGGCTCAACATGTAAACAGGGAGAAATTGAAGCTGTTGTCATTGCCACTGGCGTGCACACCTTTTTCGGCAAAGCTGCTCACTTGGTAGACAGCACCAATCAAGTTGGCCATTTCCAGAAAGTTCTAACTGCCATTGGTAATTTCTGTATTTGCTCCATCGCCGTTGGAATTGCTATTGAAATTATTGTTATGTACCCCATACAACACCGAGAGTACAGAGACGGCATTGACAATTTGCTGGTGCTTTTGATCGGAGGAATTCCAATCGCCATGCCGACTGTTTTGTCCGTCACCATGGCCATTGGTTCTCATAGGCTTTCCCAGCAGGGTGCTATCACTAAGAGAATGACAGCTATTGAGGAAATGGCAGGTATGGATGTCCTCTGCAGTGACAAGACAGGAACCCTCACGTTGAACAAGTTGACGGTAGACAGAAGCTTGGTCGAAGTGTTTGTCAAGGGGGTGGAAAAAGAGTACGTCATTGTTCTAGCAGCAAGAGCTTCTCGCATTGAAAATCAGGATGCTATTGATGCTGCTATTGTTGGAACACTTGCGGATCCGAAGGAGGCACGAGCTGGTATTACGGAAGTTCATTTCTTTCCATTTAATCCCGTAGATAAGAGAACTGCTCTGACTTACATTGATCATCAAGGGAACTGGCATCGAGCTAGCAAGGGCGCCCCTGAGCAAATATTAACTCTGTGTAATGCGAAGGAAGATGTGAAGAAGAAGGTTCACTGGGTTATTGATAAGTTTGCTGAGCGAGGACTTCGTTCTTTGGCTGTCGCGAGACAGGAAGTGCCCGAGAAATCTAAAGATGGTCCAGGTGGGCCATGGCAGTTTGTTGGTTTACTATCTCTGTTTGATCCTCCCAGGCATGATAGTGCAGAAACCATCAGAAGAGCTCTGAACCTTGGAGTAAATGTGAAGATGATTACTGGCGATCAGCTAGCCATTGCCAAGGAGACTGGGCGAAGACTTGGAATGGGAACAAACATGTACCCTTCTTCTTCGTTACTTGGTCAAGACAAGGATGCTTCCATTGCTGCATTACCTGTAGATGAATTGATTGAGAAAGCTGATGGGTTTGCCGGTGTATTTCCAGAACACAAGTATGAAATTGTAAAGAGGTTACAAGAGAAAAAACACATATGTGGTATGACTGGAGATGGAGTGAATGATGCCCCAGCTCTAAAAAAGGCAGACATTGGTATTGCTGTTGCTGATGCTACTGATGCTGCAAGAAGTGCTTCAGACATTGTTTTGACTGAACCCGGATTGAGTGTAATTATTAGTGCTGTGTTGACTAGCAGGGCAATTTTCCAAAGGATGAAGAACTACACTATTTATGCCGTTTCAATTACTATACGTATTGTGTTTGGCTTCATGTTCATTGCTTTGATTTGGAAGTTCGACTTTGCACCGTTCATGGTTTTAATCATAGCCATTCTAAACGACGGAACAATCATGACAATTTCGAAGGATCGAGTGAAGCCATCCCCACTGCCAGACAGCTGGAAATTGAAAGAGATTTTTGCTACGGGCATCGTCCTGGGAGGGTACTTGGCTCTCATGACAGTCATATTTTTCTGGGTGATGAGAGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGATCACTAAGGCAAAGCCCTGACGAAATGATGGCAGCCTTATATCTACAAGTGAGTATTGTCAGCCAGGCCCTTATTTTCGTCACCCGATCCCGCAGCTGGTCCTTTGTTGAACGACCCGGCCTTCTCTTAGTTGGTGCTTTCATAATTGCTCAGTTGGTAGCAACTTTAATAGCAGTCTACGCTGACTGGGGCTTTGCAAGAATTAAGGGAACTGGGTGGGGGTGGGCTGGTGTGATCTGGCTCTTTAGTGTGGTTACTTATGTCCCTCTTGATATTCTTAAGTTTACTATTCGCTACGCACTCAGTGGGAAAGCTTGGAATAATCTGCTGGAGAATAAGACTGCCTTCACGACGAAGAAAGATTACGGGAAAGAAGAGAGAGAAGCTCAGTGGGCGACGGCTCAGAGGACTCTGCATGGCCTTCAAGCTCCTGAAACCAACAACCTTTTCTCCGATAAGAGTAGTTACAGAGAGCTTTCTGAGATTGCCGAGCAAGCCAAGAGACGCGCTGAGGTGGCGAGGCTCCGGGAGTTGAATACATTGAAGGGGCATGTTGAATCAGTGGTGAAGCTCAAGGGGTTGGACATCGACAACATTCAGCAACACTACACTGTTTAA 4500 44.82 MASVPRSSGLLQSRSGGKIVRTRRTLRPRTPYDRPTLSTGGHEENPNWISRLVLSPTLMIATGAGKLLTSVFRHESSSSSSSSGSDSEETEDGDNDNHVTFEGFEASKKNQTSEMDSSIIKEVQVGRKKTKRLIEQLLMQETFSSRDESDRFIEILKSRVIESSNVVEAEDERLTETPKKTVGNDRVDPDLCSTAVLEARKWLNEKISGSKPKLEYEQGNDISDDVVNEELHSPVDVAKSYMQARPRWASPFINHLELKSPPSGIQLLMEETKYSIGESSLPTSKLRKESPASGSWNIKEELRRVRSKATEEMLRNLPSKKFDWSSFASGNNCTGNSIGVDKQKTCSGEKGQGGTRTADVPLTDSIAMPVLDMMHDESVDGALLPDSNGVIIQQNEDPPTNLTIEGKCDQDFSPVPRSSNGQEMQKIHNKLAEEQTSNLYNHDSMCAAKMPAEEPCELLSEASVEVPNVNESITAAVNDNDCMASGPQNSTSMQYHELPQELSKPNTRRITAGRSNETLDDHAQTGKKMTRSNRKGKARALKSETMAGDKGISLEEIKNEAVDLERIPIEEVFEQLKCSREGLSSEEGASRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFIGIIILLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDASILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIAIEIIVMYPIQHREYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLVEVFVKGVEKEYVIVLAARASRIENQDAIDAAIVGTLADPKEARAGITEVHFFPFNPVDKRTALTYIDHQGNWHRASKGAPEQILTLCNAKEDVKKKVHWVIDKFAERGLRSLAVARQEVPEKSKDGPGGPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYLALMTVIFFWVMRDTDFFSDKFGVRSLRQSPDEMMAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVGAFIIAQLVATLIAVYADWGFARIKGTGWGWAGVIWLFSVVTYVPLDILKFTIRYALSGKAWNNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQAPETNNLFSDKSSYRELSEIAEQAKRRAEVARLRELNTLKGHVESVVKLKGLDIDNIQQHYTV 1499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28687658 28701136 + BLOR05119 Blo12g01100 68361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01100 1499 Gene3D - 874 1173 IPR023214 -
Blo12g01100 1499 Gene3D - 642 1363 - -
Blo12g01100 1499 Pfam Cation transporter/ATPase, N-terminus 567 629 IPR004014 -
Blo12g01100 1499 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1111 1226 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g01100 1499 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 649 895 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g01100 1499 MobiDBLite consensus disorder prediction 514 528 - -
Blo12g01100 1499 PANTHER CALCIUM-TRANSPORTING ATPASE 551 1479 - -
Blo12g01100 1499 ProSitePatterns E1-E2 ATPases phosphorylation site. 879 885 IPR018303 -
Blo12g01100 1499 MobiDBLite consensus disorder prediction 1 46 - -
Blo12g01100 1499 Gene3D - 1448 1499 - -
Blo12g01100 1499 SUPERFAMILY HAD-like 873 1183 IPR036412 -
Blo12g01100 1499 PRINTS P-type cation-transporting ATPase superfamily signature 727 741 - -
Blo12g01100 1499 PRINTS P-type cation-transporting ATPase superfamily signature 1136 1155 - -
Blo12g01100 1499 PRINTS P-type cation-transporting ATPase superfamily signature 877 891 - -
Blo12g01100 1499 PRINTS P-type cation-transporting ATPase superfamily signature 1053 1063 - -
Blo12g01100 1499 PRINTS P-type cation-transporting ATPase superfamily signature 1159 1171 - -
Blo12g01100 1499 PRINTS P-type cation-transporting ATPase superfamily signature 1031 1042 - -
Blo12g01100 1499 Gene3D - 680 764 - -
Blo12g01100 1499 CDD P-type_ATPase_H 582 1389 IPR006534 GO:0008553|GO:0016021|GO:0120029
Blo12g01100 1499 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 582 1354 IPR006534 GO:0008553|GO:0016021|GO:0120029
Blo12g01100 1499 Gene3D - 889 1036 IPR023299 GO:0000166
Blo12g01100 1499 MobiDBLite consensus disorder prediction 75 100 - -
Blo12g01100 1499 Pfam E1-E2 ATPase 679 856 - -
Blo12g01100 1499 PRINTS H+-transporting ATPase (proton pump) signature 1308 1329 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g01100 1499 PRINTS H+-transporting ATPase (proton pump) signature 1108 1124 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g01100 1499 PRINTS H+-transporting ATPase (proton pump) signature 1136 1152 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g01100 1499 PRINTS H+-transporting ATPase (proton pump) signature 993 1011 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g01100 1499 PRINTS H+-transporting ATPase (proton pump) signature 1167 1192 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g01100 1499 SFLD Haloacid Dehalogenase 859 1187 - -
Blo12g01100 1499 SUPERFAMILY Calcium ATPase, transduction domain A 680 777 IPR008250 -
Blo12g01100 1499 MobiDBLite consensus disorder prediction 1 19 - -
Blo12g01100 1499 Pfam haloacid dehalogenase-like hydrolase 873 1150 - -
Blo12g01100 1499 SFLD p-type atpase 859 1187 IPR044492 -
Blo12g01100 1499 PANTHER PLASMA MEMBRANE ATPASE 551 1479 - -
Blo12g01100 1499 SMART Cation_ATPase_N_a_2 563 635 IPR004014 -
Blo12g01100 1499 MobiDBLite consensus disorder prediction 512 538 - -
Blo12g01100 1499 SUPERFAMILY Calcium ATPase, transmembrane domain M 563 1395 IPR023298 -
Blo12g01100 1499 Coils Coil 1450 1470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00680 Blo-Chr1:7889416 Blo12g01100 Blo-Chr12:28687658 0 dispersed
Blo12g01100 Blo-Chr12:28687658 Blo14g00667 Blo-Chr14:14446925 0 dispersed
Blo01g01343 Blo-Chr1:51066099 Blo12g01100 Blo-Chr12:28687658 0 wgd
Blo12g01100 Blo-Chr12:28687658 Blo17g00041 Blo-Chr17:264703 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01100 K01535 - zju:107420789 1710.66