Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01112 ATGGCGGAAGAGCGAGATGTGGAGGTGGTGATCGTCGGCGCAGGCCCTGCCGGTTTGGCAGTATCAGCCTGCCTGAATCGCATTTCCATCTCCAACATCTTGCTCGAACGCGAAGAGTGTTTTGCTTCTCTCTGGAAGAAAAGATCTTATGACAGATTGAAGCTTCATTTGTCTAAGAATTACTGCCAGCTTCCTCACATGTCTTTTCCTCCAAACACACCCACTTTTCCCTCCAAAGCTTGCTTCATTAAGTACCTAGAAGACTACGTCTTTTATTTTGGGATCAAGCCGTACTATCGTCGCTGCGTCGAGTCTGCTTCTTACGATGGGGACCGCGGGAGATGGCGTTTGACGGTGAGGAACAGTCTTTCCAACGACGTTGAGGTTTACGTTGGGAGGTTTTTGGTGGTGGCGACCGGTGAAAATGGGGAGGGTAACGTTCCTTATGTGCCAGGGCTTGATAGGTTTAGTGGGTTAACCATGCATTCCAGTGAGTACAAAAATGGCAGAGTGTTTGAATCCAATAATGCGTTGGTGGTGGGCTGCGGAAATTCGGGAATGGAGATTGCTTATGATTTGTCCAACTCCGGCGCGTCGACCTCCATTGTTGTCCGCAGTCCGGTACATGTGCTGGACAAAGAAATAGTGAGGCTTGGCATGTTTTTACTAAGGTTTCTTCCTTGTAAATTGGTGGACGCCATAAGTGTAAAGCTTTTCGAGCTAAAGCATGGGGACGTATCAAAATTCGGGCTTAAAAGGCCTAAGAATGGACCTTTTCTCCTCAAATCTATCACTGGTCGATCACCAACCATTGATGTCGGCTGCGTCCAGAAGATTAAGACAGGAAACATTAAGGTTATGCCTTCTATCGCAAGTATAAATGGAGAAAAAGTAGAGTTTTATGATGGCAAGTCCGACTGCTTCGATGTCATCGTCTTCGCAACTGGCTATAAGAGCAGCGTTCCAACATGGCTCAAGGGTGGTGAAGACCTGTTCAACGAAAATGGGATGCCCAAACGAAGTTGGCCACACCATTGGAAAGGAGATAATGGGCTCTACTGCGTCGGGTTTGCCAGCAAAGGGCTGCTGGGCATTTCGGCCGATGCACTCAGCGTCGCCAAAGACATTGCCTCTTTCTACGCCGCACTTAATTAA 1155 48.05 MAEERDVEVVIVGAGPAGLAVSACLNRISISNILLEREECFASLWKKRSYDRLKLHLSKNYCQLPHMSFPPNTPTFPSKACFIKYLEDYVFYFGIKPYYRRCVESASYDGDRGRWRLTVRNSLSNDVEVYVGRFLVVATGENGEGNVPYVPGLDRFSGLTMHSSEYKNGRVFESNNALVVGCGNSGMEIAYDLSNSGASTSIVVRSPVHVLDKEIVRLGMFLLRFLPCKLVDAISVKLFELKHGDVSKFGLKRPKNGPFLLKSITGRSPTIDVGCVQKIKTGNIKVMPSIASINGEKVEFYDGKSDCFDVIVFATGYKSSVPTWLKGGEDLFNENGMPKRSWPHHWKGDNGLYCVGFASKGLLGISADALSVAKDIASFYAALN 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28789262 28790563 - BLOR05131 Blo12g01112 68373

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01112 384 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 380 - -
Blo12g01112 384 Pfam Flavin-binding monooxygenase-like 8 322 IPR020946 GO:0004499|GO:0050660|GO:0050661
Blo12g01112 384 Gene3D - 5 382 IPR036188 -
Blo12g01112 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 172 196 - -
Blo12g01112 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 8 30 - -
Blo12g01112 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 176 194 - -
Blo12g01112 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Blo12g01112 384 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED 6 380 - -
Blo12g01112 384 PIRSF FMO 5 331 IPR000960 GO:0050660|GO:0050661
Blo12g01112 384 SUPERFAMILY FAD/NAD(P)-binding domain 6 279 IPR036188 -
Blo12g01112 384 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01112 K11816 YUCCA; indole-3-pyruvate monooxygenase [EC:1.14.13.168] - vvi:100260746 493.041
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00329 Blo-Chr5:3813600 Blo12g01112 Blo-Chr12:28789262 5.34E-130 dispersed
Blo05g00330 Blo-Chr5:3829647 Blo12g01112 Blo-Chr12:28789262 1.73E-126 dispersed
Blo12g01112 Blo-Chr12:28789262 Blo05g00455 Blo-Chr5:6495255 4.16E-127 dispersed
Blo12g01112 Blo-Chr12:28789262 Blo17g00055 Blo-Chr17:394136 1.83E-125 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1189 . Blo12g01112 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1413 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002100 2 2 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 1 3 2 3 3 2 2 3 64
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g01112 Blo_Chr12 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0