Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01125 ATGGCCGACCAAAATGTGTTCGATGCGCACGCCGCTTCGCACTTGGTCAAGGACCTCCGACTCACTTTCGCTTCCGGTAAGACCAAGCCTTATCAATGGAGAATATCGCAGTTGAAATCTCTCCTCAACCTTTGCGACGACCACGAGCAGGATATCGCCGATGCTCTTCGCTCCGACGTCTCCAAGCCCGAAGTCGAATCTCTCGTTTATGAGGTAGCTATGCTGAAGAATTCATGTAGAAATGCGCTTGCCCAACTCAAGCACTGGGTCATACCTGAAAAGGCTAAAACATCAATAACCACATTTCCTTCTTCAGCTGAAATCGTATCAGAACCTCTGGGTCTTGTGCTAATTATATCAGCCTGGAATTATCCTTTCTTGTTGTCACTTGATCCATTAATTGGAGCTATTGCTGCGGGAAATGCTGTTGTTTTGAAGCCATCAGAAATTTCTCCTGCAACGTCATCTTTACTTGCAAAACTATTACGTGAATATCTGGATAGCTCTGCTATAAAGGTCGTGGAAGGATCTGTTCCTGAAACTACAGCTTTGTTGGAACAGAAGTGGGACAAAATATGCTATACAGGCAACGGTAGAGTGGGACGCATTATAATGGCTGCTGCTGCGAAGCATCTTACACCAGTACTTTTGGAGCTGGGAGGAAAATCGCCTGTTGTTGTCGATTCAGGCATTAGTTTAAAGGTTGCAACAAGAAGAATAATTGCTGGTAAGTGGGGATGTAATAATGGACAAGCATGTATATCTCCAGACTACATTATAACTACAAAAGATTATGCTCCTAAGTTGATAGAATCTCTGAAGCAAGAATTAGAAAAGTTCTACGGGAAGAATCCATTGGAATCAAAGGAATTATCACGGATTGTAAACATCCATCACTTTACTCGCCTGTCAAAGATCATGGATGAAGAGAAAGTTTCAGACAAGATTATCTTTGGAGGTGAAAGAGACAAATCCAACTTAAGGATTGCTCCTACCATCTTGCTGGACGTCCCTCGAGACTCTTTGATCATGAGTGAGGAAATTTTTGGTCCATTGCTTCCCATTCTTACAGTTGACAAAGTGGAAGACAGTTTTGATATAATAAACTCTGGTCCAAAGCCACTTGCGGCCTACATATTCACCAACAACAAGAAGCTCAAGGAGCAATTTGTGACATCTGTCTCGGCAGGGGGTTTGGTCATCAACGACACGACTATACATCTTGCAGTTCACAGCCTACCATTTGGAGGAGTGGGAGATAGTGGCATAGGTTCATACCATGGAAAATTTTCTTTTGATGCTTTTAGCCATAAGAAAGCAGTCATCTATCGAGGATTCGCGGGTGATGCTTCAATGAGGTACCCACCATTCACTTCTGGAAAGTTGAGAATTCTCAAGGCTCTTGTTGGTGGTAGTTTATGGGGCATCATCCGTGCTCTTTTTGGGTGGTCTTGA 1455 43.37 MADQNVFDAHAASHLVKDLRLTFASGKTKPYQWRISQLKSLLNLCDDHEQDIADALRSDVSKPEVESLVYEVAMLKNSCRNALAQLKHWVIPEKAKTSITTFPSSAEIVSEPLGLVLIISAWNYPFLLSLDPLIGAIAAGNAVVLKPSEISPATSSLLAKLLREYLDSSAIKVVEGSVPETTALLEQKWDKICYTGNGRVGRIIMAAAAKHLTPVLLELGGKSPVVVDSGISLKVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLIESLKQELEKFYGKNPLESKELSRIVNIHHFTRLSKIMDEEKVSDKIIFGGERDKSNLRIAPTILLDVPRDSLIMSEEIFGPLLPILTVDKVEDSFDIINSGPKPLAAYIFTNNKKLKEQFVTSVSAGGLVINDTTIHLAVHSLPFGGVGDSGIGSYHGKFSFDAFSHKKAVIYRGFAGDASMRYPPFTSGKLRILKALVGGSLWGIIRALFGWS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28877374 28881128 - BLOR05144 Blo12g01125 68386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01125 484 Pfam Aldehyde dehydrogenase family 13 441 IPR015590 GO:0016491
Blo12g01125 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Blo12g01125 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
Blo12g01125 484 PANTHER ALDEHYDE DEHYDROGENASE 3 484 IPR012394 GO:0006081
Blo12g01125 484 Coils Coil 38 58 - -
Blo12g01125 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 439 IPR016162 GO:0016491
Blo12g01125 484 PANTHER ALDEHYDE DEHYDROGENASE 3 484 - -
Blo12g01125 484 PIRSF ALDH 2 478 IPR012394 GO:0006081
Blo12g01125 484 SUPERFAMILY ALDH-like 15 446 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g01125 Blo-Chr12:28877374 Blo16g00548 Blo-Chr16:22500135 0 dispersed
Blo12g01125 Blo-Chr12:28877374 Blo01g00398 Blo-Chr1:4515469 4.53E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01125 K00128 - twl:120017045 792.727