Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01126 ATGGGCTGCGGAGGTTCAAAGGTTGATGAGTGTCAATTGGTTACTCTTTGCAGAGAGCGCAAGGAGTTTATAAAAGCCGCTTCTCATCACCGCTACGCCCTAGCCGCTGCTCACATCTCTTATTTTCACTCTCTCAGAGACGTCGGCGACGCCCTTCGCAAATTCGTCGACGAAGAGATCGTCATCGCCGCTGCTGGCTCTTCCTCACCTGCCTCTCCTATCCTCACATTACCCTCCGACGAAGGCAAGAGGAGGAGGACGCCCAAACCTGACGCCAAAAATAAAAAGTCGTCGCCCTCCGCCTCGATTTCACATTCGGCTTCAATTTCCCCAGGAAATTCTCAAGAAGACCAGATCGAGGGCTCTCACCTCCATATCTCATCGGGGTCCGAGTCGGATTCCGACCTGGGTTCCTCGTCGAGTCACATTCACTTGGAGGATAGCCCAGAAGAACAGAAGGGTCCTACTCCGCCTCCTTATTCTTCCTCATACTCACCAGCATTTTGGGGTCCTCCTGTGACTAATATGCACACCTACTACATGAGAAGGTCGCCGACGCCAGCAAAGACAATGGTGTATGATGGCCAGGAGAGATATTTTGCTTCCAATGGCTTATGGACCGATTCGTCTTTTGAATATCAGGGTTATTCGCAGTATCAGAATACTGGATTCTATGGGATTCCAATGGGTATGCATCCCAATGACTATCATCAACATAATCAGCAACCGAGTTCCCCTGCTCCTCCACCAGCTCCTCCTTCGCCTCCAAGTGTCTCCGCTTGGGATTATATAAATGTTTTTGATAACTATGATTATGGTTATCCGGGTTATTACCCTAAGAACAAGTATGGATACGGTTCAACCGTGAGTAGTCCCGATTCCAATGAAGTGAGGAAAAGGGAAGGGATTCCTGATTTAGAAGATGAAACAGAGCAAGAAAAGTTGAAAGAGACTTATAAGGAGAAGAAAGTAAATTCGGATATAAAGAACAAGTATAATAATTCGGGTGAAGGGACATCAAAGGCTGTACCACCACAAAGCTATGGGGAAAACTTAAAGACCGTGCCATTGCAAACCAGTGATAGCTCAACGTCAGCCCAAAGAAAGGAAATACATAGCAGTCCGGATACCATTGAGTCGAGAAGTTCTGTAGATAAACTCGTGAGAAAGAAAGCTGTGAGTTTTGAGGTTGGAGAAGAATCAGCCCTTGATGTCGAATCCTCCAAACTGAGTAGTCTAACCACATTGACAGCCCGTGGTACAAGGGACCTACAGGAGGTTGTCAAGGAAATAAGAGATGAATTTGAGGTTGCCTCTAGCTATGGGAAAGAGGTGGCTCTATTGCTTGAGGCGGGGAAGCTGCCTTATCAATCTAAAACGGCCATTCTTAAAGTTATTTTTTCAAGGGTCATGTACTTGATCGTGCCTTCAATGTTATACTCTCATCCGCCACCAGGGACTAGAATTCAGTTGGATACAAGGACAGTGAAGTTGGCAAAACAATACAGTGCGTCTGCTGGCTTCGGGAACAACTTTGTTATAAAATCGGGAAATCTGTCGTTAACTCTAGAAAAACTCTATGCATGGGAAAAGAAATTGTATAAAGAAGTCAAGGATGAAGAAAAGCTACGTCTAATGTATGAAAAGATGTGCAAGAGATTGAAAACCTTGGATGACCGAGGGGCAGAGCCGAGTAAAATTGATGCTACTCGGACCACAATTAGAAAGCTGCTGACAAAAATTAATGTTTGCATCTCGGCAGTTGATGCTATATCTAGCCACATACATAAATTGAGGGACGAAGAATTGCAGCCCCAGCTCACAGAGTTGATTCATGGATTGATAAAAATGTGGAAATCCATCTTCAAATGTCACCAGAAACAGTTTCAAGCCATCATGGACAGCAAGGTTCGCTCTCTAAAAGCCAGAACTGGATTCCGGGGGGATTTGAGTATAAAAGCAACTTTGGAACTAGAACTTGAGCTTCGGAATTGGTACAACCGTTTCAACAGGTGGATAAGCACCCAAAAGTGTTACGTGGAAGCCTTGAATGAATGGCTGTTACGATGCATTAGCCATGAGCCTGAGGAAACCTCGGATGGGATTGCCCCTTTTTCCCCTGGTCGAATTGGAGCTCCAGCCATATTTATAACATGCAATGATTGGTATCAAGGTATGGAAAGTATTTCTGAAGAGAGGGTGGGAAAGGTGATGCGGGAGTTTGCTTCGAACTTGGAGCATTTATGGGAAAGGCAGGGGGAGGAGCAGCGGCAAAGGATAAAAGCGGAGTTCCTAACCAAGGATTTTGATAAACAGCTGAGAGAGCTACGGATGGAGAGGGGAAGGATGAAAGAGGAACAGGAGAGGGTATCAGCAGATTCGAAGGCTGCTTCAGAGAGCGGAGTGTCAGCATTGGATGATCTAAAAGTGGATTTGGATTCAATGAGGAAGAGAGTGGAAGAGGAGAGAGAGAGGCATAAAGATGCGGTGAGATTAGTGAATAGCGCAGCATCGAGTAGCATACAGGTAGGATTGGTGCCAATATTTGAGGCATTAGAGAAGTTCAGTAGCGAGGTATTGAAAGCACACGAGCAAGTTAGAATGGCAAATGGTTCTATCCTGTATCTGATTTTCCTTGCATCATTTTTCATGAATGCAGACGCTGCGGCTCCCGCTTGTTTTTCATTTTACTTTATGGCTTCAGCTGTGGTTAACTGCCCCAGTAATATCAGCATAATCAAGGGATTAGATTGTCTTAAACCCTTGGCAAATCCAAAGTTCAACTGCGTGCAACTTCCCGTCAAATCTCGTCCGACTCGTGCCTTTGTTGTTCGAGCAACCGAGGAACGCGATGGACAGGTGAAGAAACTTGGACTAACTGATGCGGAGTGTGAAGCTGCTGTTGCAGCTGGAAATGTGCCCGAAGCACCCCCAGTTCCGCCTAAACCAGCGCCACCTGCTGGAACTCCTGTCGTATCTTCACTTCCTCTCAGCCGCCGTCCTCGTCGAAATCGAAAATCACCAGCATTGAATTCATCATTCCAGGAAACAAACATATCACCTTCCAATTTTGTCTATCCCCTTTTCATTCATGAAGGTGAGGAGGATACGCCAATTGGAGCTATGCCTGGATGTTATAGACTTGGGTGGAGACATGGACTAGTGGAAGAGGTCGCCAAGGCCCGTGATGTTGGAGTTAATAGCATTGTGCTCTTCCCAAAAATTCCAGATGCTTTGAAGACTCCCACAGGGGATGAAGCATATAATGACAATGGCCTTGTTCCCCGATCAATTCGTCTGCTCAAAGACAAATTCCCTGATCTTGTGATTTACACTGATGTTGCACTAGATCCATATTCATCAGATGGTCACGATGGTATTGTTAGAGAAGATGGAGTTATAATGAATGATGAGACAGTGCATCAATTATGTAAACAAGCTGTTTCCCAGGCCCGAGCAGGTGCTGATGTTGTTAGTCCGAGTGACATGATGGACGGTCGAGTTGGAGCAATTCGATCTGCTCTTGATGCTGAAGGTTTCCAAGACGTCTCTATCATGTCCTATACAGCAAAGTATGCAAGTTCATTTTATGGTCCGTTTCGAGAAGCTCTTGACTCAAATCCACGTTTTGGAGACAAAAAGACTTATCAGATGAACCCAGCAAATTACAGGGAGGCTTTGATTGAGGTTCGAGAGGATGAAGCAGAAGGGGCAGATATCCTTTTGGTGAAACCTGGTCTCCCTTATTTGGATATCATTAGGCTTCTCAGGGATAGCTCTCCTTTGCCAATTGCAGCATATCAGGTGTCGGGGGAATATTCAATGATAAAGGCGGGTGCGGTTTTGAAAATGATTGACGAAGAAAAGGTTATGATGGAGTCTCTTTTGTGTCTCCGACGTGCGGGTGCCGATGTCATCCTCACCTACTTTGCCTTGCAGGCTGCCAGATGTTTATGCGGGGAGAGGAGGTAA 3972 45.72 MGCGGSKVDECQLVTLCRERKEFIKAASHHRYALAAAHISYFHSLRDVGDALRKFVDEEIVIAAAGSSSPASPILTLPSDEGKRRRTPKPDAKNKKSSPSASISHSASISPGNSQEDQIEGSHLHISSGSESDSDLGSSSSHIHLEDSPEEQKGPTPPPYSSSYSPAFWGPPVTNMHTYYMRRSPTPAKTMVYDGQERYFASNGLWTDSSFEYQGYSQYQNTGFYGIPMGMHPNDYHQHNQQPSSPAPPPAPPSPPSVSAWDYINVFDNYDYGYPGYYPKNKYGYGSTVSSPDSNEVRKREGIPDLEDETEQEKLKETYKEKKVNSDIKNKYNNSGEGTSKAVPPQSYGENLKTVPLQTSDSSTSAQRKEIHSSPDTIESRSSVDKLVRKKAVSFEVGEESALDVESSKLSSLTTLTARGTRDLQEVVKEIRDEFEVASSYGKEVALLLEAGKLPYQSKTAILKVIFSRVMYLIVPSMLYSHPPPGTRIQLDTRTVKLAKQYSASAGFGNNFVIKSGNLSLTLEKLYAWEKKLYKEVKDEEKLRLMYEKMCKRLKTLDDRGAEPSKIDATRTTIRKLLTKINVCISAVDAISSHIHKLRDEELQPQLTELIHGLIKMWKSIFKCHQKQFQAIMDSKVRSLKARTGFRGDLSIKATLELELELRNWYNRFNRWISTQKCYVEALNEWLLRCISHEPEETSDGIAPFSPGRIGAPAIFITCNDWYQGMESISEERVGKVMREFASNLEHLWERQGEEQRQRIKAEFLTKDFDKQLRELRMERGRMKEEQERVSADSKAASESGVSALDDLKVDLDSMRKRVEEERERHKDAVRLVNSAASSSIQVGLVPIFEALEKFSSEVLKAHEQVRMANGSILYLIFLASFFMNADAAAPACFSFYFMASAVVNCPSNISIIKGLDCLKPLANPKFNCVQLPVKSRPTRAFVVRATEERDGQVKKLGLTDAECEAAVAAGNVPEAPPVPPKPAPPAGTPVVSSLPLSRRPRRNRKSPALNSSFQETNISPSNFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSIVLFPKIPDALKTPTGDEAYNDNGLVPRSIRLLKDKFPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRSALDAEGFQDVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALIEVREDEAEGADILLVKPGLPYLDIIRLLRDSSPLPIAAYQVSGEYSMIKAGAVLKMIDEEKVMMESLLCLRRAGADVILTYFALQAARCLCGERR 1323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28887078 28895810 + BLOR05145 Blo12g01126 68387

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01126 1323 MobiDBLite consensus disorder prediction 94 143 - -
Blo12g01126 1323 Coils Coil 773 793 - -
Blo12g01126 1323 MobiDBLite consensus disorder prediction 294 328 - -
Blo12g01126 1323 MobiDBLite consensus disorder prediction 974 990 - -
Blo12g01126 1323 MobiDBLite consensus disorder prediction 329 381 - -
Blo12g01126 1323 CDD ALAD_PBGS_aspartate_rich 999 1319 - -
Blo12g01126 1323 PANTHER UNCHARACTERIZED 1 870 - -
Blo12g01126 1323 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 870 - -
Blo12g01126 1323 MobiDBLite consensus disorder prediction 230 256 - -
Blo12g01126 1323 MobiDBLite consensus disorder prediction 780 799 - -
Blo12g01126 1323 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Blo12g01126 1323 Pfam Delta-aminolevulinic acid dehydratase 999 1316 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 PRINTS Delta-aminolevulinic acid dehydratase signature 1262 1277 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 PRINTS Delta-aminolevulinic acid dehydratase signature 1185 1204 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 PRINTS Delta-aminolevulinic acid dehydratase signature 1116 1130 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 PRINTS Delta-aminolevulinic acid dehydratase signature 1237 1253 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 PRINTS Delta-aminolevulinic acid dehydratase signature 1292 1311 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 PRINTS Delta-aminolevulinic acid dehydratase signature 1147 1166 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 MobiDBLite consensus disorder prediction 71 167 - -
Blo12g01126 1323 SMART ALAD_2 996 1318 IPR001731 GO:0004655|GO:0033014|GO:0046872
Blo12g01126 1323 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 1237 1249 IPR030656 -
Blo12g01126 1323 SUPERFAMILY Aldolase 995 1319 - -
Blo12g01126 1323 MobiDBLite consensus disorder prediction 288 383 - -
Blo12g01126 1323 Pfam Protein of unknown function (DUF632) 424 746 IPR006867 -
Blo12g01126 1323 Gene3D Aldolase class I 989 1323 IPR013785 -
Blo12g01126 1323 Coils Coil 805 832 - -
Blo12g01126 1323 MobiDBLite consensus disorder prediction 972 1015 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01126 - - - zju:107421098 962.6
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00264 Blo-Chr1:3383761 Blo12g01126 Blo-Chr12:28887078 1.16E-18 dispersed
Blo04g00600 Blo-Chr4:5164305 Blo12g01126 Blo-Chr12:28887078 2.38E-95 dispersed
Blo11g00217 Blo-Chr11:1755706 Blo12g01126 Blo-Chr12:28887078 3.02E-06 dispersed
Blo12g01126 Blo-Chr12:28887078 Blo15g00400 Blo-Chr15:5698955 7.97E-102 dispersed
Blo12g01126 Blo-Chr12:28887078 Blo13g00483 Blo-Chr13:25788560 2.22E-129 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g249 . Blo12g01126 . . . Bpe04g00008 . . . . Cma01g01385 Cma09g00786 . . . Cpe06g00620 . . . . . . . . . . . . . . . Cone4ag1415 Cone7ag1523 Cone17ag1288 . Lsi04g02398 Csa04g01790 . . . . . . . . . . . Cmo01g01435 Cmo09g00777 . . . . . . Bhi09g02691 Tan01g4039 . . Hepe01g2294 . . . . . . . . . . . Chy07g00629 Cme07g00836
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009710 1 0 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 2 3 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g01126 Blo_Chr12 FPKM 0.0 0.0 0.0 0.0 0.0 0.537463 0.405519 0.0 0.0 0.0