Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00002 ATGATTACAGGTCTCCACGTTCATCTCTTACATGCTTCCAACAAACATCAAAAACATGAAGTTGGTTGTCTCTGCAACTCCTCCGATCATTATCGTACATACAAATCCCTCCGAAACCATCGCTCTCCTTCTCATCCTTCCTCCTCCTCCTCCTCCTCCTCCCCTTTTACCAATGGCCGTTCTCCCATTGTCACCTTCCCGCCTCCCTCTTTCTTAGCTCCCACCCCATCTTTTTTGCAGACATCAATGGGAGGAGATAAAGATATCAGGAATTTCTCCTCCCTTTTCGCTTTCTTCCTCATTGCCTCCCTCCTAGGACTCCCCTTCGGTTCTGCTGATGGCGGTGGCTATTCTTATTCTCCGCCTGATAATTACCTCATAGATTGCGGCTCCCCGGAACTGACTCGCCTCAGCGACGGCCGGACATTTAAGTCCGATCCCGATAGTACTTCTCTCCTCTCCACCGACGAAGACGTACTGACCTCAGCTGGTTCCATTCCTGTCAACTCGTCGTCTCCATCTCTTCCATTGTATCGAAGTGCTAGAATTTTTCCTGCTGCATCAACGTACAGTTTTTATATTTCCCAAACCGGCCGGCACTGGGTTCGGCTCTACTTTTACCCTCTTCATCACCCAACGTATAATCTCTCCGGTGCTGTTTTTACGGTCACCGCCGATAATTTCGTTCTCCTCCATGATTTCTCGGTGAAGGATGATTCGAAATTGGTGTTCAAAGAATACCTTATCAACGTAAGTAGTGATAAATTCTCTCTCCAATTCAAACCCAAGAAGAATTCTTGTGCGTTTGTGAATGCTATTGAGGTAGTTTCCGCACCGGATTCTCTGATTTCTGATTTCGCTTCTGCAATTTCGCCTGTCGGAGATTTCAAAGGTTTGTCGAATTACGCTCTTCAAATAAATTATCGAGTAAATGTGGGAGGACAACCTATAACTCCTCGAAACGATACCCTTTCAAGAACATGGGAATCGGATTCTGAGTATAACAAGTTTCCTCAAGGGTCTAACAATGTCTCTGTTCCTCCGACTTGGATAAGATACTCGCCGGACGGAGCGACGCCATTGATTGCGCCGAATTCAGTCTACGCGACGGCTCAAGATATGCAAGACCCTGAAACTATGCAAGTGAGCTTCAATCTCACATGGAGTTTCAGCGTCGAGATGGGATACTCTTATTTGATCAGACTCCATTTTTGCGACATTGTGAGCAAGGCTCTGAACAGCCTGTACTTCGACGTGTACATCAATGGAGTAATGGGTGTGTCGAATCTCGATCTCTCGAGTCTCACTGGTTTCCTTTTCTCTGCTTATTACAAAGACCTTGTGGTCAATTCTTCCGCCATTGTTAACAGCTCGATCATGGTTCAGGTCGGCCCTTCTAATCTTCAATCCGGGGTCGCAAACGCCATTCTCAACGGCGTGGAGATTATGAAGATAAGCAACGACGCCAGAAGCTTGGATGGTTTGTTCACCGTCGATGAGGTTTTCATGGGGGATCGAGGGAGGAGCTGGATGAAGATCATCGCGACCGTCGCGCTCGGAATGGGGGTAACGGCTATGCTGTTTCTCGCCGTAGTTTTTGTTCGACGGAAAAAGAGGCCTCAAGGTTATGAGAAGAGAAACAGTTTCTCTTCATGGCTTCTTCCTTTATCTTCTTCTAGCCGTTCTTCCTTCATGTCTAGCCGGAGCAGCTCCAGAAGATCGAACAACTTCGGGTCTAGAAAAAGCAAAAATGGTTTCTCCGGCATCTACAGCAGTGTAGGCCTGGGAAGATTCTTCACTTTCAACACATTACAGAGCGCTACACAGAATTTCGACGAGAAGGCAGTAATCGGCGTTGGTGGGTTTGGAAAAGTCTACATCGGAGAGTTGGAAGATGGAACTAAACTCGCCATTAAAAGAGGAAACGCAAGCTCCGAGCAGGGCATCAACGAGTTCCGAACAGAGATCGACATGCTCTCGAAGCTCCGCCATCGCCACCTCGTATCGCTCATCGGCTTCTGCGACGAAAATTCCGAGATGATTCTCGTCTACGAATACATGGCCAACGGACCTCTACGAGACCATCTCTACGGCTCGAACCTCCCTCCATTGTCGTGGAAAAAGCGACTCGAAATCTGCATTGGTGCTGCCAGAGGTTTACACTATCTCCACACCGGCGCCACCCTAGGAATCATCCACCGCGACGTCAAGACGACGAACATCCTCCTCGACGAGAATTTCGTCGCCAAAGTTTCCGATTTCGGTCTCTCGAAAGCCGCTCCCTCGCTGGAGCAAACCCACGTCAGCACGGCGGTGAAGGGCAGTTTCGGCTACCTCGATCCTGAATACTTCAGAAGACAACAACTGACCGATAAATCCGACGTTTATTCGTTCGGAGTCGTCCTCTTCGAGGTGTTATGCTCTCGGCTGGTCATAAATCCCGCCCTTCCGAGAGAGCAGGTGAATCTCGCCGAGTGGGCGATGAAATGTCACAAAAAGGGTACGCTCGAAAAGATAATCGATCCCCATATTGCTTCCTCCATCAGCCATGGCTCCCTGAAAAAATATGTAGAAGCTGCAGAGAAGTGTTTGGCTGAATATGGCGTCGACAGGCCCTCCATGGGAGATGTTTTGTGGAACTTGGAATATGCTTTACAGCTTCAAGAAGCAGCCTCAGGGATTGATCATCCCCCAGAAGAGAACAGTTCTAATCTGGTCGTTTTAAACAAATCGGACGATAATGCTCGTCGAGGAGAACCGAGCGCCGCCGTGAACGATAATTCCGAAGTACTCGTTAGCTCTCCGTTGTTTTCTCAGATCGGAAGCATCCAAGGAAGGTGA 2841 48.47 MITGLHVHLLHASNKHQKHEVGCLCNSSDHYRTYKSLRNHRSPSHPSSSSSSSSPFTNGRSPIVTFPPPSFLAPTPSFLQTSMGGDKDIRNFSSLFAFFLIASLLGLPFGSADGGGYSYSPPDNYLIDCGSPELTRLSDGRTFKSDPDSTSLLSTDEDVLTSAGSIPVNSSSPSLPLYRSARIFPAASTYSFYISQTGRHWVRLYFYPLHHPTYNLSGAVFTVTADNFVLLHDFSVKDDSKLVFKEYLINVSSDKFSLQFKPKKNSCAFVNAIEVVSAPDSLISDFASAISPVGDFKGLSNYALQINYRVNVGGQPITPRNDTLSRTWESDSEYNKFPQGSNNVSVPPTWIRYSPDGATPLIAPNSVYATAQDMQDPETMQVSFNLTWSFSVEMGYSYLIRLHFCDIVSKALNSLYFDVYINGVMGVSNLDLSSLTGFLFSAYYKDLVVNSSAIVNSSIMVQVGPSNLQSGVANAILNGVEIMKISNDARSLDGLFTVDEVFMGDRGRSWMKIIATVALGMGVTAMLFLAVVFVRRKKRPQGYEKRNSFSSWLLPLSSSSRSSFMSSRSSSRRSNNFGSRKSKNGFSGIYSSVGLGRFFTFNTLQSATQNFDEKAVIGVGGFGKVYIGELEDGTKLAIKRGNASSEQGINEFRTEIDMLSKLRHRHLVSLIGFCDENSEMILVYEYMANGPLRDHLYGSNLPPLSWKKRLEICIGAARGLHYLHTGATLGIIHRDVKTTNILLDENFVAKVSDFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCSRLVINPALPREQVNLAEWAMKCHKKGTLEKIIDPHIASSISHGSLKKYVEAAEKCLAEYGVDRPSMGDVLWNLEYALQLQEAASGIDHPPEENSSNLVVLNKSDDNARRGEPSAAVNDNSEVLVSSPLFSQIGSIQGR 946
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 25105 27945 + BLOR05283 Blo13g00002 68397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00002 946 PANTHER OS03G0759600 PROTEIN 114 923 - -
Blo13g00002 946 Pfam Malectin-like domain 127 485 IPR024788 -
Blo13g00002 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Blo13g00002 946 ProSiteProfiles Protein kinase domain profile. 611 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00002 946 PANTHER OS07G0166700 PROTEIN 114 923 IPR045272 GO:0004714|GO:0006468
Blo13g00002 946 Gene3D Transferase(Phosphotransferase) domain 1 687 900 - -
Blo13g00002 946 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Blo13g00002 946 MobiDBLite consensus disorder prediction 558 579 - -
Blo13g00002 946 Gene3D Phosphorylase Kinase; domain 1 578 686 - -
Blo13g00002 946 MobiDBLite consensus disorder prediction 40 59 - -
Blo13g00002 946 Pfam Protein tyrosine and serine/threonine kinase 615 808 IPR001245 GO:0004672|GO:0006468
Blo13g00002 946 SUPERFAMILY Protein kinase-like (PK-like) 585 882 IPR011009 -
Blo13g00002 946 Gene3D - 124 279 - -
Blo13g00002 946 Gene3D - 303 488 - -
Blo13g00002 946 CDD STKc_IRAK 617 882 - -
Blo13g00002 946 SMART serkin_6 611 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00002 946 MobiDBLite consensus disorder prediction 37 59 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00002 Blo-Chr13:25105 Blo13g00543 Blo-Chr13:27301208 0 dispersed
Blo13g00002 Blo-Chr13:25105 Blo04g00525 Blo-Chr4:4529425 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84606 PF12819 Malectin_like 6.30E-37 CL0202 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00002 - - cpep:111793369 1187.56