Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00009 ATGGGGAGTCACTCAGTCAGAAGTTGGTCTCAAAATGAAGCAATTGGCAGAAATGAAACTTATTCCTTTACAGTTCCATGTCTTCTTCCTCCACTCGATTTCAGCTTTCCTGCTTTGGATTGGCCCTATGATTCGCTCATTCAAGAGAGCCTTTCTGATGCTGCTCCTCCAGCAAAGAATTTCCAATCGGATTCTCTATATTTTTCTGTAAATATTGATCCAATTCGAACTTCAAAACAAGGTGAGTTTTCATATGATTATGGAGAAATGGGTGGGGTTTGGAGCGCAATCAATGAAGAATTTGGGTTCCAAGAAAAGCGTATATTCGGCGAAAATGGAGGAATGGAAATGGAAGTGAGGGAGGAGAAGAAGGGTATTAAGAGGTGCAGAGAAGAGAAAAGTAGCAGTTCTAAAACCCTGTCAAGAACTACTATTTCTCAGTATTTTTACATGCCTATAACTCAAGCGGCGAAAGAATTAAACGTGGGTTTAACTCTTCTGAAGAAAAGATGCAGAGAATTAGGTATTCGCAGATGGCCTCATAGGAAGTTGATGAGTCTCCAAACCCTAATCAAGAACGTTCAGGATTTGAGCAAGGATGATGGGGATGAAACAGAAGCCAAGTTAAAGGATGCAGTAGAAATACTGAAGAGGGAGAAGACGATGATGGAAGAAATGCCCGATTTGCAGCTGGAAGACAACACAAAGAGGCTCAGACAAGCCTGTTTTAAGGCCAACTACAAGAAGAGGAAGACAATGGGTATGGTGGAATCGCATTCGTCTCCATCAACCGCCAACTTGGATAGTATTGAAGAAGTGGATTTTGAAGAAGATGAAGAAATGAAATCTCTCTTGTCTCAGTGCTCCTTCTCTTCTTCTTCTGGCTTGATCTTTTAG 897 41.36 MGSHSVRSWSQNEAIGRNETYSFTVPCLLPPLDFSFPALDWPYDSLIQESLSDAAPPAKNFQSDSLYFSVNIDPIRTSKQGEFSYDYGEMGGVWSAINEEFGFQEKRIFGENGGMEMEVREEKKGIKRCREEKSSSSKTLSRTTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVQDLSKDDGDETEAKLKDAVEILKREKTMMEEMPDLQLEDNTKRLRQACFKANYKKRKTMGMVESHSSPSTANLDSIEEVDFEEDEEMKSLLSQCSFSSSSGLIF 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 92272 93490 - BLOR05290 Blo13g00009 68404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00009 298 Coils Coil 206 226 - -
Blo13g00009 298 ProSiteProfiles RWP-RK domain profile. 121 207 IPR003035 -
Blo13g00009 298 PANTHER PROTEIN RKD4 41 263 IPR044607 GO:0003700
Blo13g00009 298 Pfam RWP-RK domain 140 187 IPR003035 -
Blo13g00009 298 PANTHER PROTEIN RKD1-RELATED 41 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00009 Blo-Chr13:92272 Blo17g00903 Blo-Chr17:29779574 7.89E-09 dispersed
Blo13g00009 Blo-Chr13:92272 Blo04g00720 Blo-Chr4:6616126 3.93E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13101 PF02042 RWP-RK 2.80E-21 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00009 - - qlo:115964427 261.536