Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00018 ATGGAGGCTTCTTCTCGGTCTGAAGACGCTGTCGTCAAAGAAGAAAGAAAGAAAGACCGATCCAGTGATGGGGATGAACTTTTCGAACGAGAAATTCTTTTCAAGATTGGAGCTGGAAAAATGAGTCATGAAAGTAATGATAAGAAGTCACACTCATACAATCAGGAGTTGCACTCTAACAATCAGGTCCCCTTCGTGACAAAAATGGAGAAATCTTCTGTAGAACTTGACTCAATGACATCTTCTTCGAGTCGAAATGATCAGGATGAAGAGCTTGAATCAGCAAGAGCAGAAATGGGAGAGGTGAGAGAAGAAAACCAACGACTGAAAATGTGCTTAGATCAGATAATGAAGAATTACAGGACGCTACAAATGCAGTTCGAGGACATCGTTCGACAAGATGGAAAGAAAAATACGATGCCACCGGCGGAAACGCGTCAAGAAGTCGAAGAAACCGACCTAGTTTCCCTTACACTCGGAAGATTTCCAAGCGCGGGAAAAACGATCAAAGAAAACATCATGAATTCTCAGAAACTGATCAAAGAGAATGATCAACAAATCATAACACAAGAATTAGCTCTTGGGTTAGACTGCAAATTCGATGGCTCTAGGTTGAGCGATCGAATAAAGGCTCATTCGCCGAAAGGTCCAAGCCCTAGTTCGAACAGCAACGAAGAGATCAAAGAAGGAGAAGGGGAAGATCCAGGGCCACCCAACAAAGGTTTGAAGACAATGAGAAGTGGCGAAGATGAAATGATGCAGCAGAATCCACCAAAGAAAGCTAGGGTTTGTGTGAGGACTCGATGCGATACGCCAACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATATCAAAAGGAAACCCATGCCCCAGAGCTTATTATCGTTGCACTGGAGCTCAATCATGTCCCGTTAGAAAACAGGTGCAAAGATGTGCCGAGGACATGTCCATTTTAATCACTACATACGAAGGAACCCATAACCACCCTCTCTCCGTCTCGGCTACTGCCATGGCATCCACCACTTCTGCAGCAGCGGCAATGCTATTATCCGGGTCATCAAGCTCACAATCCAGCCCTAACCTATCAGCAACAACAGCCACCACCACTCCGGCAAATCTCCATGGATTAAACTTCTATCTTTCTGACAATTCAAATTCAAAACAATTTTATTTGCCCAATTCTTCCATATTATCTTCCTCGCCTACACACCCAACAATCACCATAGACCTCACTTCAAATCCGTCTTCTTCTTCTGCTTCTTCTTCTTCCCATTTTGGCAGACCTTTTTCTTCATCGAATCCTCCTAGGTATCCTTTCACAAACCTGGATTTCGGTTCTTCACAATCCAACCTTATGTCTTGGGGTAATGGCCCTCTTGGCTTTGGAAATCAACTGCCTTATAACAGAACCCAAATGGGAACTCTAGATATCGGAGGTCTGGCCCTACAAAATAGCATCTACCAAACTTATATGCAGAAGGCAAATAACGTTCCAGCGGCCGCGGCAGCGGCGCCGCCACGACACCCTCTTCCGGATCCAATCGCGGACGCAACGAAGGCAATTACTGCAGACCCTAGTTTCCAATCTGCTTTAGCGACGGCATTAAAATCATTCATTGGAAATGGTGCTAGCGGCAGTGGCGGCGGTGAAAATTTTCAGGAAACATTGAAGTGGGTGGAAAAGTTTCCACTGGGGACGTCTACCCAAAAAGGAAACGGGTGCGGATCCAGCTTCATCGACACCACTCCGGCGACGAATTCTCAGCATGTGAACTTGACGTTCTTACCTTTAAATTCATCGCCATTTTCGACATCCAAAAGTGCTTCTACATCTCTGGGAGATAATAGAGATCACCTACCTAGCTGA 1878 45.15 MEASSRSEDAVVKEERKKDRSSDGDELFEREILFKIGAGKMSHESNDKKSHSYNQELHSNNQVPFVTKMEKSSVELDSMTSSSSRNDQDEELESARAEMGEVREENQRLKMCLDQIMKNYRTLQMQFEDIVRQDGKKNTMPPAETRQEVEETDLVSLTLGRFPSAGKTIKENIMNSQKLIKENDQQIITQELALGLDCKFDGSRLSDRIKAHSPKGPSPSSNSNEEIKEGEGEDPGPPNKGLKTMRSGEDEMMQQNPPKKARVCVRTRCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTGAQSCPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAAAMLLSGSSSSQSSPNLSATTATTTPANLHGLNFYLSDNSNSKQFYLPNSSILSSSPTHPTITIDLTSNPSSSSASSSSHFGRPFSSSNPPRYPFTNLDFGSSQSNLMSWGNGPLGFGNQLPYNRTQMGTLDIGGLALQNSIYQTYMQKANNVPAAAAAAPPRHPLPDPIADATKAITADPSFQSALATALKSFIGNGASGSGGGENFQETLKWVEKFPLGTSTQKGNGCGSSFIDTTPATNSQHVNLTFLPLNSSPFSTSKSASTSLGDNRDHLPS 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 273344 276592 + BLOR05299 Blo13g00018 68413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00018 625 MobiDBLite consensus disorder prediction 38 102 - -
Blo13g00018 625 MobiDBLite consensus disorder prediction 207 261 - -
Blo13g00018 625 SUPERFAMILY WRKY DNA-binding domain 266 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00018 625 Gene3D WRKY domain 259 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00018 625 MobiDBLite consensus disorder prediction 55 83 - -
Blo13g00018 625 MobiDBLite consensus disorder prediction 1 24 - -
Blo13g00018 625 ProSiteProfiles WRKY domain profile. 269 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00018 625 MobiDBLite consensus disorder prediction 38 54 - -
Blo13g00018 625 Pfam WRKY DNA -binding domain 275 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00018 625 MobiDBLite consensus disorder prediction 411 436 - -
Blo13g00018 625 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 59 620 - -
Blo13g00018 625 MobiDBLite consensus disorder prediction 84 102 - -
Blo13g00018 625 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 59 620 IPR044810 GO:0003700
Blo13g00018 625 Coils Coil 85 112 - -
Blo13g00018 625 SMART WRKY_cls 274 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00018 Blo-Chr13:273344 Blo04g00658 Blo-Chr4:5790071 2.56E-62 dispersed
Blo13g00018 Blo-Chr13:273344 Blo15g00300 Blo-Chr15:3385666 0 wgd
Blo13g00018 Blo-Chr13:273344 Blo16g00193 Blo-Chr16:4327158 4.58E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13105 PF03106 WRKY 2.50E-23 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00018 - - tcc:18604620 567.0