Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00022 ATGAGGATAGCAACAGAAACAACAACTGATACTAGTACTTCAGTATATGATGACCAAATCCACGGTTATCGACAGTATCACGGATTACGTCATAACGCTTCACGTCTTCTTCGCCGAAGTAGACTACCGAGAACTTTGGAGTCCTTACTAGATCCACAACAACAAGTTCAGGTGTCACAGCAGCAAAGGGCTTCACTTGTTCCAGCAGAGGTCCTTTACGTCCAAATTCTGCATCCACGGGCCACTGGAGTTCGATGTCTTATAGTCCTACGTGACACCAGATGGTCTGACGATAGATCTATACTAGGAACTATGGAGATGGACTTAACACAGGGCACTCAGTTGGTATATCTTGCACCTAATCTAATGATGAGCCTACAGGATTTTGTCAATTATTTCCAAATTGCAATTCAAACCAACGACTATGACGCACGGATCGGGGGAGAAAGCAATCTAGGGCTTCAAGCCATTCCCGGTGTACCCCACACTGCAACTTCCTCCCAAGGAATCCTTTGGAACCTGCGACCTTCTGTACAACGGCCATTAACAATCCCTTCCCAGATTATAACTCGCACCAGGTGCTGCGGAACTATCTCCCTAAGATTTCATGATTATGCTGACCAGCCCACGCGAGTTTCAACACAAGAGACCCAAATTGATCCTGATATCTCACGAGATGACACCGTTCTTCGTCATGAGTTTGCTGGAGTATTAATCATGCATAATCCATGCGACCTTGACTCCTATGACTCATCAAATGATGACTGGTTGGAGCAATATGACTCTTACGAAACATCTGCATCCTTGGCGCACCCATGGGATTTATTGGGCCAGCCCACTGGCAAATACGACTTTAAGGTCAAATACACTCCTCCCGCTCATATTGATTTTGTAAATCCCTTTGGAATAGATACAGGGCGTACTTGGAACCATTGGGATGATGATAGTTCAGAATCCTCCGCCAGCTGCAATACCTTGGATGAGGAACCTGAGCTTATTCCCAACCCTAAAGTCAGCTGGAATCACTGGGAAGAAAATGAACCAAATACTGAAACAACCTGGGATCATTGGGACGATGACCAAGCCGATTGGTATCAAGCGGAAAATCAAACAGCAGACTCAGAGTCACTAGAAGATGAGTTATATGACCCTGATGAAGTCCCTGATTATTATGATTGGGAGGACCATTGCCTGGATTGGGAAAAATTTGATCAAACTAACTATGCCTTTGCAGCATCCGTTACTATATCACCCCAGATGGATTATCCTCCCTCCATCAAGGCTTTAGAAAGAGCCGTTCGCAATATTGAAATAGGAGCTGTTGCCTCCTCCTCCATAACATCTGCTTATCAGCCTCCCACAGACGCCATTATGGGTCAACCATCTTATGCTCCTGCAACCTCATCCCAACCTCCAGAACAAAGTCAACTTAACCAAGAAAGAATCAAGGGAAGAGTAAAAGACTTTGGTAAATATTATAATGGCCAATGGGAGCTTCCTACTGCTCAAGAAACTTCAGGAGCATTATTGACCCTTCCAACAGACATCGGTCTGTACAATGATGTCATCACCCGTTGGGAATCAATTACCCTTAATCTCATCAATGACAAAATATGGGTTGATAATCAAAGTAAAGTAAATTATATTGAAAATTTACTTGGCGAAATAGAAAAGAAGATTTTTATTCAATGGCATATGGCATACCCAACAGAGTATGCTACCCTGGTTAATATTGCTGAGGATACCCAGAATATTCTTTTTCAGATTCGAAGGATATTCCTACTAGAAGATCCTACTCAAGGTTCAACGGAGGAACAGAACAGAGCTTACCGTGATCTGGAGAGACTCACTTGTCCTTCCGTTAAGAATCTGATCGCATACATGAACACATACAAGATATTAGCGACCAAATTAGGAAGAATGTATATCTCCTCTGAGCTCTCTGAAAAATTTACAAAGAAAATGCCACTCCTAGTAGGGCAAGCAATTGAAAAGGCTTTTATTGCTCAGAATCCAGGAGTGACTATTGGAGTTATTCCAAGGATTCATTTTTCATATCAATTCTTAGCAGAATTATGCAAGCAAGCCGCCTTTACACGCAGCCTAAAAGATCTTGACTTCTGTCAGGAAATCCCCATTCCAGGGGCCTATAATACTTCTGAAGGCTTAATTCATGAGCTATTGGGCTATGTTATTTATTTAACTAATGAAAACACTCGACTGAATCGAGGCCTACACGACAAGTTATCTAAGGAGTATGATGACTTACTCCCACTTTATGATTCAGCTCCTTCAACAGTTGAGGAATCTGCACAGTGCAACAATATAAGCACTACCAGCCCTTCTCCTCGCCTGACGAAAGGCTATCCTGAAGAGTGGGGAGTGGAAACCCGCCACAATGGGTTGGAAACGGACCACTGCACCTCCAGCCGATCGTTGTTGAGGTTGAAGTTGTGCTTCAACCTCGATTTCAACTTCAATTCTGCAATCTTCACCTGTCGCGAGTGCTCCTTCTTGCACCGCGGTGTTGCTCCTTGCACCGTGGGTGCTCCATCTTGCATCGTGGCTGATCAATCAACAGTGGCTATCAAGGAGCGATTTGGTAAATATGAGGAAGTTCTTGAGCCAGGATGCCACTGGATGCCTTGGTTTTTGGGAGATCAGGTTGCCGGCCATCTTTCTCTTAGGTTGCAGCAGTTGGATGTCAAATGCGAGACCAAGACAAAGGACAATGTGTTTGTGAATGTGGTTGCCTCGATTCAATATCGCGCGCTGGCTGATAAAGCTAGTGATGCTTTTTACAAACTTAGCAACACCAGGTCTCAGATCCAGGCTTATGTTTTTGATGTCATTAGAGCAAGTGTTCCAAAGCTCAACTTGGATGATGCTTTCGAGCAAAAGAATGAAATTGCCAAAGCGGTTGAAGATGAACTCGAAAAGGCAATGTCTGCCTATGGGTTTGAGATTGTCCAAACACTCATTGTTGACATAGAACCTGACGAACATGTGAAGCGAGCGATGAATGAAATCAACGCAGCGGCAAGACTAAGAGTTGCAGCCAATGAGAAGGCCGAGGCGGAGAAGATCCTGCAGATAAAACGGGCAGAGGGAGAGGCCGAGGCAAAATATCTCTCTGGATTGGGTATCGCAAGGCAACGCCAGGCAATCGTAGATGGACTAAGAGACAGCGTTTTGGGTTTCTCAGTGAACGTCCCTGGAACAACTGCAAAGGATGTGATGGACATGGTCTTAGTCACCCAATATTTCGACACCATGAAAGAGATTGGAGCTGCCTCAAAGTCCTCTGCGGTGTTCATTCCACACGGACCTGGTGCGGTTAGGGATGTTGCTTCTCAGATCCGTGATGGGCTGCTTCAGGGCTCTGCTCCCCACAAGTAA 3399 44.72 MRIATETTTDTSTSVYDDQIHGYRQYHGLRHNASRLLRRSRLPRTLESLLDPQQQVQVSQQQRASLVPAEVLYVQILHPRATGVRCLIVLRDTRWSDDRSILGTMEMDLTQGTQLVYLAPNLMMSLQDFVNYFQIAIQTNDYDARIGGESNLGLQAIPGVPHTATSSQGILWNLRPSVQRPLTIPSQIITRTRCCGTISLRFHDYADQPTRVSTQETQIDPDISRDDTVLRHEFAGVLIMHNPCDLDSYDSSNDDWLEQYDSYETSASLAHPWDLLGQPTGKYDFKVKYTPPAHIDFVNPFGIDTGRTWNHWDDDSSESSASCNTLDEEPELIPNPKVSWNHWEENEPNTETTWDHWDDDQADWYQAENQTADSESLEDELYDPDEVPDYYDWEDHCLDWEKFDQTNYAFAASVTISPQMDYPPSIKALERAVRNIEIGAVASSSITSAYQPPTDAIMGQPSYAPATSSQPPEQSQLNQERIKGRVKDFGKYYNGQWELPTAQETSGALLTLPTDIGLYNDVITRWESITLNLINDKIWVDNQSKVNYIENLLGEIEKKIFIQWHMAYPTEYATLVNIAEDTQNILFQIRRIFLLEDPTQGSTEEQNRAYRDLERLTCPSVKNLIAYMNTYKILATKLGRMYISSELSEKFTKKMPLLVGQAIEKAFIAQNPGVTIGVIPRIHFSYQFLAELCKQAAFTRSLKDLDFCQEIPIPGAYNTSEGLIHELLGYVIYLTNENTRLNRGLHDKLSKEYDDLLPLYDSAPSTVEESAQCNNISTTSPSPRLTKGYPEEWGVETRHNGLETDHCTSSRSLLRLKLCFNLDFNFNSAIFTCRECSFLHRGVAPCTVGAPSCIVADQSTVAIKERFGKYEEVLEPGCHWMPWFLGDQVAGHLSLRLQQLDVKCETKTKDNVFVNVVASIQYRALADKASDAFYKLSNTRSQIQAYVFDVIRASVPKLNLDDAFEQKNEIAKAVEDELEKAMSAYGFEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQGSAPHK 1132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 335697 345413 - BLOR05303 Blo13g00022 68417

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00022 1132 Coils Coil 1003 1036 - -
Blo13g00022 1132 Coils Coil 964 984 - -
Blo13g00022 1132 MobiDBLite consensus disorder prediction 316 341 - -
Blo13g00022 1132 Gene3D Band 7 domain 887 1013 IPR036013 -
Blo13g00022 1132 MobiDBLite consensus disorder prediction 452 479 - -
Blo13g00022 1132 Pfam SPFH domain / Band 7 family 855 1028 IPR001107 -
Blo13g00022 1132 CDD SPFH_like_u4 857 1124 - -
Blo13g00022 1132 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 852 1129 - -
Blo13g00022 1132 SMART PHB_4 851 1011 IPR001107 -
Blo13g00022 1132 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 3 852 1129 - -
Blo13g00022 1132 SUPERFAMILY Band 7/SPFH domain 891 1017 IPR036013 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00022 - - - twl:120016656 518.079
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01096 Blo-Chr6:34264258 Blo13g00022 Blo-Chr13:335697 3.16E-110 dispersed
Blo10g00202 Blo-Chr10:2553072 Blo13g00022 Blo-Chr13:335697 6.21E-06 dispersed
Blo13g00022 Blo-Chr13:335697 Blo15g00304 Blo-Chr15:3425984 0 dispersed
Blo15g00140 Blo-Chr15:1314715 Blo13g00022 Blo-Chr13:335697 8.79E-106 dispersed
Blo03g00413 Blo-Chr3:11717566 Blo13g00022 Blo-Chr13:335697 2.64E-08 transposed
Blo04g01240 Blo-Chr4:24368556 Blo13g00022 Blo-Chr13:335697 7.02E-33 transposed
Blo04g01251 Blo-Chr4:24663414 Blo13g00022 Blo-Chr13:335697 1.82E-17 transposed
Blo06g00568 Blo-Chr6:28242054 Blo13g00022 Blo-Chr13:335697 2.69E-108 transposed
Blo06g00576 Blo-Chr6:28342878 Blo13g00022 Blo-Chr13:335697 4.89E-64 transposed
Blo07g00306 Blo-Chr7:3767978 Blo13g00022 Blo-Chr13:335697 4.66E-10 transposed
Blo09g00137 Blo-Chr9:3480728 Blo13g00022 Blo-Chr13:335697 2.32E-135 transposed
Blo13g00241 Blo-Chr13:10609292 Blo13g00022 Blo-Chr13:335697 5.43E-137 transposed
Blo16g00605 Blo-Chr16:24551027 Blo13g00022 Blo-Chr13:335697 1.20E-165 transposed
Blo01g00417 Blo-Chr1:4710709 Blo13g00022 Blo-Chr13:335697 2.14E-164 wgd
Blo13g00022 Blo-Chr13:335697 Blo16g01133 Blo-Chr16:39845973 1.48E-111 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g504 . . Bda06g00554 Bda15g00593 Bpe12g00557 . . Bma12g01006 . . . Cma11g00163 . Car11g00137 Sed08g1721 . Cpe04g01515 Bhi02g00346 Tan09g2160 Cmetu03g0832 . Hepe09g0137 . . Cla06g01607 Cam06g1781 Cec06g1832 Cco06g1841 Clacu06g1743 Cmu06g1688 Cre06g2504 . . . . . . . . Blo13g00022 . . . Bpe07g00795 . . Bma08g00211 . . Cmo11g00147 . . . . . . . . . . . . . . . . . . . . Lsi06g01485 . Chy02g02517 Cme02g01904
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010130 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00022 Blo_Chr13 FPKM 0.0 0.0 0.0 0.0 0.849789 0.804267 1.043267 0.085775 0.109039 0.037848