Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00023 ATGTACAAGGTACCGGTTCTACACGGTACCGGTTCGATCGCACCGGGTACCGAGGACCGGTACCGTGTAGAACCGGTCCCGAGAGTACCGGACCGGATCTGGGGAGAAGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTTACAACTTTATGACCTTCAATCACTTAAAATGCAAACCGGGATCACGATTGAACCTTGTTATTGGTCCAAATGGATCTGGAAAAAGCTCAATTGTTTGTGCCATTGCACTTGGTCTTGGTGGCGAGCCTCAGCTTCTTGGGAGAGCCACAAATATTGGTGCATTTGTGAAACGTGGAGAGGAGTCTGGCTATATAAAAATTACCTTGAGAGGTGAGACTAAAGAAGAGCAGATTGCCATCATGCGGAGAATGGACACTCGTAATAAGTCTGAGTGGTTGTTCAATGGAAAAGTGGCTCCAAAAAAAGAAGTATCCGAAATCATACAAAGGTTCAACATCCAAGTTAATAATTTGACTCAAGATAGGGTTTGTGAGTTTGCAAAACTAACTCCTGTGCAACTTCTAGAAGAGACTGAAAAAGCTATTGGTGATACTCAACTTCCAGGCCAACATCATGCGCTTGTTGAAAAAAGCCGTGAAATAAAGAATATAGAGCGGGCTGTGGAAAAAAATGGAGACACATTAAATCAGTTAAAGGCTCTAAATGCTGAGCTAGAGAAGGATGTTAAGCGTGTTCGTCAAAGGGAAATACTTCTAGCAAAGGCTGAGTCCATGAAAAAGAAATTGCCGTGGCTTAAGTATGATATAAAGAAGGTTGAATATATAGAATTGAAGGAGAAGGAGAATGATGCCAAAAAGAAGTTGGATGAAGAAGCAAAGACATTAAATGGTCTCAAAGAACCCATTGAGAAACATAAAAAGAAGAAAGCAATGGTGGATGCTAAAATAAAAAAAATTAGCAATATCATGAATAATAATACGGGGAAACGAATCGAGCTTCTAGAGAATGAAAACCATTTGGGGGTAGAAGTACAAGGCAAGTACAAAGAAATGGGAGATTTGAGGAAGCAAGAAGAGTCTCGTCAGCAAAGAATTATACAAGCTAAGGAGGAACTTGTTGCAGCTGAACTGGAGCTTCAAAATTTGCGTCCTTATTGTGTTCCTAGGGAGGATATTGAAAGATTAGCTAGTCAAATAATGGATCTTGAACTTTCTGCAAATCAAAAGAGGTTTTCTAAGACAGAGAGTGAAAAAGTCTTAGCTCAAAAAAGGACAGCCTTGAGGCAGTGCTTAGACAGGTTAAAGGATATGGAAAGCAAACAAACTAAACTTTTGCAGGCATTGGAAAAATCTGGAGCTGATAAGATTTCTGATGCTTACCACTGGTTGCAAGAACATCGCCATGATTTCAACAGGGAGGTTTATGGTCCAATTTTGCTTGAGGTAAATACAATTGCATTAATATCTGGTAATATAAGGTTAATGTTTCTAATCAGATTCACGCTGACTACTTGGAAAGTCAAACCCCTTATTACATCTGGAAGGACAAAAATTTCAGAGGGTGGCATGCAGATTTTCGACGGCAGCATGACTCTTGGAGGCCAAATCGTGCTTGTTGGAGGCCAGAATGGAGAATGCGAACGGTCGGATGGAGGGGAACCCATCTCTGTGGTGGGAAATTCTATAGTCATGGCTGGCGATCCTATGTTGATGGTCGACGGATCTTCAAGGGTGGATCTTCATGACCTTGAGGACAAGTCTTTTGTAACACAAGATTCTAATGATCGTGACCTTTTGGTCAAAAGTTTCAAATCATTTGATGTTCCAATTTTGAATTATGTGGATGATGAGGGTCGGCGAAAAGAAAATTTTGAAATTACTGAGGAGATGCGGAAACTTGGCATCTATTCTAGGCTTGACCAAGTTTTTGATGCCCCCAACTCTGTGAAGGAAGTTTTGATCAGTCAGTTTGCTTTGGACCGCTCATATATTGGGTCTAAGGAGACTGATCAGAAGGCAGATGCTGTTTCAAAATATGGAATTTTAGATTTTTGGACTCCAGAAAATCACTATCACTGGTTTGTCTCCAGATACGGTGACCATATGACTGGAAATGTGGAACCAGTGCAGCGCTCCCGTCTTCTTCTGTGCAATAAGGATGTGGGTGAAATTGATGGTCTGAGATCGAAGAAAAGTGAACTGGAAGAATCTGTTGCGGCTTTAGAAGAAAGCCATAAATCTTTTCAGATTGAGATAAGAAACATAGAAAATGAAACAGCTAAATTTCGTAAACAACGGGAGGACATTGTTAACATTGTGCACCAGGAGAAGAGGAAGCGTCAGGAAATGGCAAATCGTATCAATCAAAGGAAAAAGAAACTAGAATCCATGACAAAAGAGGAAGACTTGGAGACTCTCATAGCAAATCTTAATGACCAAGCAGCAGGTATATCTATTCAACGGTTCCGATGTGCAATAGAGATTAAGAATCTACTTGTAGAAACTGTATCCCACCAACAAAGTTTTGCGGAACATCATTTCTCAGCGATTGAATTTGATGCCAAGATTAGAGACATGGAATTCAATATGAAGAAACAGGAGAAGGATGCTATGCAAGCATCATTGCACTTTGAGAATTGTAAGAAGGAAGTAGAGGATTGTAGACAGCAACTGTCAGTTGCTAAGAGGCATGCAGAATCAATTGCTGTGATCACTCCTGAACTTGAAAAGGATTTTCTTGAGATGCCAACTACAATCGAAGAATTGGAGACTGCAATTCAAGACAATATTTCTCAAGCTAATTCTATTCTATTCTTGAACCACAACATATTAGAGGAGTATGAACATAGACAGAGTCAGATAAGAAGCATTGCAACAAAACTTGAAACTGATCAAGAGGAGCTAAAAAGGCGGGTCACTGAAGTTGATGATCTCAAGGAAAATTGGCTTCCTACTTTGAGGAACCTTGTTACTCTGATTAACGAGACCTTCAGTCGCAACTTCCAAGAGATGGCTGTTGCTGGAGAAGTCTCGTTGGATGAGCATGGCATGGACTTCGATAAATTTGGAATTCTTATAAAAGTAAAGTTCAGACAATCAGGACAGCTTCAGGTTCTCAGTGCTCACCATCAGTCTGGCGGGGAACGCTCAGTTTCAACAATTCTTTATCTTGTATCTCTTCAAGACCTTACCAATTGCCCGTTTAGGGTGGTTGATGAGATAAATCAAGGAATGGATCCAATTAATGAACGGAAGATGTTCCAGCAGTTGGTGAGAGCCGCTAGCCAACCAAATACACCACAAAATCTACCGTATATGCAACTAGGAGGGATTATATCTCCCCTCATTGGCAAACTCAGTAGATTACAGAGACTGGCACTTCACCAGAACAGCTTACATGGATTGATCCCCAATGAGCTTACCAGTTGTACAGAGCTCAGAGCCTTTGATTTGTCAAGCAATTCATTGAAGGGAGCAATACCATCGAGTCTTGGCCGGCTTTCACGATTACGTAGTTTGAATTTGTCTACGAATTTCTTCAGTGGCGAAATCCCTGATATTGGAGTTTTAAGTACCTTTGGAAATATATCGTTCATTGGGAATTTAGATCTTTGTGGCCGACAAGTGAACAAGCCGTGTCGAACGTCTATGGGATTCCCTGCCGTTTTACCTCATGCTGCTAGTGATGAAGCTGCAGGCAAATTTTCTGATTTTAACTATCTCCCGGCTAAACGCTCTTCTCATTACATCAAAGGAGTGATTATTGGTGCATTGTCGACAACTGGTTTTGCTCTGGTCCTGCTAGTCGTCTTCTTATCGATTCGATTGCTATCGAAAAAGGAAAGGGAAGCCAAGAAATATACAGAAGTCAGAAAACAAACCGAACCCCAGCCAAGTACGAAACTTATTACTTTCCATGGTGATCTACCGTACCCATCGTGTGAAATCATCGACAAGCTGGAAGCGCTCGAAGAAGAAGATGTTGTCGGGTCGGGGGGGTTTGGCACCGTTTATCGGATGGTGATGAATGATTGCGGGACGTTTGCTGTTAAACGGATCGACCGGAGCAAAGAAGGTTCGGATCAAGTGTTCGAAAGGGAGCTCGAGATCTTAGGAAGCATCAAGCACATAAATTTGGTAAACCTACGCGGATACTGCAAGCTTCCAGCGTCGAAACTTCTCATCTACGACTATCTTGCCATGGGGAGCTTGGACGATTTCTTGCATGAAAATGAAGGCGGGGAAAATCTTTTGAATTGGAGCGATCGATTACGAATAGCTCTTGGTTCGGCTCGAGGGTTGGCATACTTGCACCATGATTGTTGTCCCAAAATCGTTCATCGTGATGTTAAATCGAGCAATATTCTCCTAGATGAGAACTTAGAGCCTCGTGTATCGGATTTTGGCCTTGCCAAGCTGTTGGTTGACGAGGATTCACATGTCACGACGGTAGTTGCCGGCACTTTCGGTTACTTGGCACCGGAGTATCTGCAAAGTGGGAGAGCGACTGAGAAATCCGATGTTTATAGCTTTGGGGTTCTGTTGCTGGAGCTTGTCACCGGAAAGAGGCCGACCGATCCGTCTTTCGTTAAAAGAGGATTGAATGTCGTTGGCTGGATGAACACGATGCTGAGAGAGAAGCGAGTCGAAGACGTGGTGGACGGAAGGTGTAAAGATGCGGATCATGAAACGGTCGAAGCCATTTTGGAAATAGCAGCAAAGTGCACGGACTCGAACCCGGACGATCGGCCATGGATGAACCAAGTGCTGCAGCTGCTAGAGGTGGAGGTCATGTCGCCTTGTCCGACCGATTTCTACGAGTCTCAATCTGATCACTCCTGA 4830 42.53 MYKVPVLHGTGSIAPGTEDRYRVEPVPRVPDRIWGEDDYMPGSIIEIELYNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATNIGAFVKRGEESGYIKITLRGETKEEQIAIMRRMDTRNKSEWLFNGKVAPKKEVSEIIQRFNIQVNNLTQDRVCEFAKLTPVQLLEETEKAIGDTQLPGQHHALVEKSREIKNIERAVEKNGDTLNQLKALNAELEKDVKRVRQREILLAKAESMKKKLPWLKYDIKKVEYIELKEKENDAKKKLDEEAKTLNGLKEPIEKHKKKKAMVDAKIKKISNIMNNNTGKRIELLENENHLGVEVQGKYKEMGDLRKQEESRQQRIIQAKEELVAAELELQNLRPYCVPREDIERLASQIMDLELSANQKRFSKTESEKVLAQKRTALRQCLDRLKDMESKQTKLLQALEKSGADKISDAYHWLQEHRHDFNREVYGPILLEVNTIALISGNIRLMFLIRFTLTTWKVKPLITSGRTKISEGGMQIFDGSMTLGGQIVLVGGQNGECERSDGGEPISVVGNSIVMAGDPMLMVDGSSRVDLHDLEDKSFVTQDSNDRDLLVKSFKSFDVPILNYVDDEGRRKENFEITEEMRKLGIYSRLDQVFDAPNSVKEVLISQFALDRSYIGSKETDQKADAVSKYGILDFWTPENHYHWFVSRYGDHMTGNVEPVQRSRLLLCNKDVGEIDGLRSKKSELEESVAALEESHKSFQIEIRNIENETAKFRKQREDIVNIVHQEKRKRQEMANRINQRKKKLESMTKEEDLETLIANLNDQAAGISIQRFRCAIEIKNLLVETVSHQQSFAEHHFSAIEFDAKIRDMEFNMKKQEKDAMQASLHFENCKKEVEDCRQQLSVAKRHAESIAVITPELEKDFLEMPTTIEELETAIQDNISQANSILFLNHNILEEYEHRQSQIRSIATKLETDQEELKRRVTEVDDLKENWLPTLRNLVTLINETFSRNFQEMAVAGEVSLDEHGMDFDKFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQNLPYMQLGGIISPLIGKLSRLQRLALHQNSLHGLIPNELTSCTELRAFDLSSNSLKGAIPSSLGRLSRLRSLNLSTNFFSGEIPDIGVLSTFGNISFIGNLDLCGRQVNKPCRTSMGFPAVLPHAASDEAAGKFSDFNYLPAKRSSHYIKGVIIGALSTTGFALVLLVVFLSIRLLSKKEREAKKYTEVRKQTEPQPSTKLITFHGDLPYPSCEIIDKLEALEEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSKEGSDQVFERELEILGSIKHINLVNLRGYCKLPASKLLIYDYLAMGSLDDFLHENEGGENLLNWSDRLRIALGSARGLAYLHHDCCPKIVHRDVKSSNILLDENLEPRVSDFGLAKLLVDEDSHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTMLREKRVEDVVDGRCKDADHETVEAILEIAAKCTDSNPDDRPWMNQVLQLLEVEVMSPCPTDFYESQSDHS 1609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 372529 401737 - BLOR05304 Blo13g00023 68418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00023 1609 Gene3D - 945 1093 IPR027417 -
Blo13g00023 1609 SMART serkin_6 1319 1594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00023 1609 SUPERFAMILY Protein kinase-like (PK-like) 1299 1590 IPR011009 -
Blo13g00023 1609 Pfam RecF/RecN/SMC N terminal domain 44 1088 IPR003395 -
Blo13g00023 1609 Pfam Protein tyrosine and serine/threonine kinase 1321 1588 IPR001245 GO:0004672|GO:0006468
Blo13g00023 1609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1441 1453 IPR008271 GO:0004672|GO:0006468
Blo13g00023 1609 Coils Coil 720 754 - -
Blo13g00023 1609 Coils Coil 957 977 - -
Blo13g00023 1609 ProSitePatterns Protein kinases ATP-binding region signature. 1325 1347 IPR017441 GO:0005524
Blo13g00023 1609 Gene3D Ribonuclease Inhibitor 1099 1203 IPR032675 -
Blo13g00023 1609 Coils Coil 150 170 - -
Blo13g00023 1609 SUPERFAMILY L domain-like 1098 1199 - -
Blo13g00023 1609 Pfam Leucine rich repeat 1116 1174 IPR001611 GO:0005515
Blo13g00023 1609 CDD ABC_SMC5_euk 42 184 - -
Blo13g00023 1609 Coils Coil 213 244 - -
Blo13g00023 1609 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 582 1097 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Blo13g00023 1609 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 38 480 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Blo13g00023 1609 Gene3D Phosphorylase Kinase; domain 1 1281 1394 - -
Blo13g00023 1609 ProSiteProfiles Protein kinase domain profile. 1319 1594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00023 1609 Coils Coil 416 436 - -
Blo13g00023 1609 Gene3D Transferase(Phosphotransferase) domain 1 1395 1596 - -
Blo13g00023 1609 Coils Coil 267 294 - -
Blo13g00023 1609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 1090 IPR027417 -
Blo13g00023 1609 CDD ABC_SMC5_euk 1024 1126 - -
Blo13g00023 1609 Coils Coil 776 796 - -
Blo13g00023 1609 Gene3D - 43 224 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01167 Blo-Chr2:43324372 Blo13g00023 Blo-Chr13:372529 8.08E-151 dispersed
Blo13g00023 Blo-Chr13:372529 Blo10g00752 Blo-Chr10:23685726 9.83E-08 dispersed
Blo13g00023 Blo-Chr13:372529 Blo07g00419 Blo-Chr7:7885630 9.94E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84607 PF02463 SMC_N 1.00E-23 CL0023 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00023 - K22803 egr:104454617 1098.19