Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00027 ATGCGCTCGATTATCTACCAATCTAACATGCGGGATAGGTTTCCGGTCAACGGATGTTGGGAGGTGATCTGCTTTCTCCGGCATCAAATGCAGGCAGTCGAGGAGGAGTATAATCTCGTCTTATCACAGCTCGAGACGTGTAGACAGCATCAGCTTGAAGATGTTACTTCTCAGTTAGAGCTAGGAATGGGTCCACCCTCTAATGCTATTCCACTTTATAATCAACCTTCCATGACGTCCTTTTCTGCAACACAAAATGAAGCTAATTACAACCCTATTTGCTTTGATTTTAAAGACAATTTCGCAAATCCTTCGTGGGTTCAACTCCCTTCTGGAGATACTAATAATATATATGTTAATAATATGGAAAATCACCCTCTTCCCATACAAGAACAAGTTCAAAACTGTGATGATATGCAGCCATTTTTTGATACCATGGATGATAGACACTCGTATATTGATACAAAAGAGGCTTACGAGTCTAGTTCAGAAGAGTCTCTTAGAGATCCAACATTGTTAGTCCAGGATGTAGCGGAGAACGAGCTGAAAAATGCTGCTGCTAGTTTCAGTCTCACCAATGCCAACTGA 588 41.33 MRSIIYQSNMRDRFPVNGCWEVICFLRHQMQAVEEEYNLVLSQLETCRQHQLEDVTSQLELGMGPPSNAIPLYNQPSMTSFSATQNEANYNPICFDFKDNFANPSWVQLPSGDTNNIYVNNMENHPLPIQEQVQNCDDMQPFFDTMDDRHSYIDTKEAYESSSEESLRDPTLLVQDVAENELKNAAASFSLTNAN 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 439174 439853 + BLOR05308 Blo13g00027 68422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00027 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 1 168 - -
Blo13g00027 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 168 - -
Blo13g00027 195 Pfam Lateral organ boundaries (LOB) domain 1 39 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00027 Blo15g00256 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00027 Blo-Chr13:439174 Blo07g00773 Blo-Chr7:24973447 1.77E-08 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13106 PF03195 LOB 7.80E-06 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00027 - - mesc:110617644 189.119