Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00032 ATGGATCCTCCCCTAGTAAACGAGTCTTCCTTCTCGGCCGCCAACCCGTCTGCTTACAGCTTGACTGAGATTTGGCCGTTCGGCGGAGCATCTGACGGAGTACTGGGACTACGAATCGGTAATTTGCGTCGGAATCTTGGTGGGTTAGCTGAGGGTTCTGGAAATCCTGATGGGTCGGTGGAGGAATCGACAGTGACTGAGCAGAGCGGGGGCGGAGGGAGGAGGAAGAGGGTTGATGTGAGCTCGGAGGATGAGTCTTCGAAAATGGTTTCCACTAGTAGTGCTACTAACTTGAATGATTCAAGTGGTAAAAGAATGAAGTTGGGGGAATCCAGAGATGAAAACGGTGGTGGGAAAGCTGAAGAAACAAGCTCAGCTAATGGCAACAAACCCGGTGGACCAACCTCTAAAACATTGGAGCCACCTAAAGATTATATTCACGTGAGAGCGAGAAGAGGCCAAGCTACCGATAGCCACAGTCTGGCAGAACGAGCTAGGAGAGAGAAAATAAGTGAGAGAATGAAAATCCTTCAAGACTTGGTACCGGGATGTAATAAGGTTATTGGAAAGGCACTCGTTCTCGATGAGATTATCAATTACATTCAATCTTTGCAGCATCAGGTCGAGTTTCTGTCGATGAAGCTTGAAGAGGTTAATTCAAGAATAAATGGGAACCCGGGCATTCAAGGCTTTACTACCAAGGATAATGGAACCCAGCCAGTTGATGCTGCAGGAATGATATATGGTTCCCAAGCAATGCCAAGAGAATATGGTCAAGGTCAAGGCTTACAGCTTGAATGGCTGCATATGCAAGTTGGTGGTGCTGGTTGTGAAAGAGCAAATTAA 846 47.28 MDPPLVNESSFSAANPSAYSLTEIWPFGGASDGVLGLRIGNLRRNLGGLAEGSGNPDGSVEESTVTEQSGGGGRRKRVDVSSEDESSKMVSTSSATNLNDSSGKRMKLGESRDENGGGKAEETSSANGNKPGGPTSKTLEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEEVNSRINGNPGIQGFTTKDNGTQPVDAAGMIYGSQAMPREYGQGQGLQLEWLHMQVGGAGCERAN 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 522851 525509 + BLOR05313 Blo13g00032 68427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00032 281 MobiDBLite consensus disorder prediction 105 119 - -
Blo13g00032 281 CDD bHLH_AtBPE_like 144 226 - -
Blo13g00032 281 MobiDBLite consensus disorder prediction 85 104 - -
Blo13g00032 281 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
Blo13g00032 281 MobiDBLite consensus disorder prediction 120 134 - -
Blo13g00032 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 204 IPR011598 GO:0046983
Blo13g00032 281 MobiDBLite consensus disorder prediction 47 142 - -
Blo13g00032 281 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 1 274 - -
Blo13g00032 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 222 IPR036638 GO:0046983
Blo13g00032 281 Gene3D - 151 226 IPR036638 GO:0046983
Blo13g00032 281 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 274 IPR024097 GO:0006355
Blo13g00032 281 Coils Coil 201 221 - -
Blo13g00032 281 SMART finulus 160 210 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00032 Blo15g00288 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00894 Blo-Chr11:17912638 Blo13g00032 Blo-Chr13:522851 9.70E-61 dispersed
Blo13g00032 Blo-Chr13:522851 Blo07g00067 Blo-Chr7:975466 2.57E-45 dispersed
Blo01g00412 Blo-Chr1:4665092 Blo13g00032 Blo-Chr13:522851 6.24E-76 wgd
Blo13g00032 Blo-Chr13:522851 Blo15g00288 Blo-Chr15:3173837 1.94E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13108 PF00010 HLH 2.30E-08 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00032 - - zju:107418528 383.645