Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00035 ATGGTGTCCTCCTCTTCTCAGAAGAAAACCTTCCATTCTCTCCTCGCTTCCAAACTCACAAAGCTTACTATCCCTTCTTCTTCTTCCTCCTCCCCATCTTCTTCCTCCCCCACCACCCACCACGACTTCGAGTTTTCTGACCTTTTTGGCCATCCCATCTCCTCCCCATCCGCTTCCTCCTCGTTCCCGAGAGATCCACTACAACCTCAGATGCTAGTGATTCATAATCGATCTCATTCCTTTGTCGGCCCCTCTCCTCGCTTCGCTCCTCCCTCGTCACTACCCTTTCACCAGGAACTTGATTCGCAGAGTGAGGAAGAAGAAGGTGAAGAAGCGGATGATGAAATTCCAGATATTGAAGGAGCTCAAAATGATGAGAGAAAGAATGAAATCCAGAACAGTGATGGAAATAAAGTAGTGGGTAAGATTGGGCCTACAGATTTTGAGATTCTTAGAGTTGTCGGTAAGGGTGCGTTTGGAAAGGTCTTTCTGGTGAAGAAGACGGTGGACGATGGAGGAGATAGTGATGGGATTTATGCAATGAAAGTGATGAGAAAGGACACTATTATAAAGAAGAATCATGTTGATTACATGAAGGCTGAGAGAGACATTCTTACCAAAGTTGTGCATCCCTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAAAGCAAAGCTCTATTTGATTCTCGATTTCATAAATGGAGGACATCTCTTCTTTCATCTCTATCGACAGGGCCTTTTCAGTGAGGACCAGGCAAGGATTTATGCTGCAGAGATTGTATCTGCTGTTTCACATCTGCACAGTTGTGGAATCGTGCATCGGGATCTCAAGCCTGAAAATATTCTAGTCGATTCAGACGGGCATGTTATGCTAACAGATTTTGGGCTTGCCAAGGAAATCGATGAGTCAAGCAGGTCAAATTCATTGTGCGGAACGACAGAATACATGGCTCCCGAAATTTTACTGAATAAAGGGCACAACAAAGATGCTGATTGGTGGAGTGTTGGGATACTCTTATATGAAATGCTTTCTGGGCAACCACCATTTACACATTCAAATAGGAAGAAGCTTCAAGAGAAAATTATCAAAGACAAAGTGAAACTTCCACCTTATCTTAGCAGTGAAGCACACTCTTTACTTAGAGGACTACTTCAAAAGGAACCATCGAAAAGATTAGGAAGTGGGCCAAATGGAGCAGATGAGATAAAAAGTCATAAATGGCTTCAACCAATCAACTGGAAGAAATTGGAGGCCAGAGAAATGCAACCGAAGTTCAAGCCCGATGTAACTGGGAAAGACTGTACAGCCAATTTCGACCGTTGCTGGACGGTAATGCCTCCAGATGACTCACCAGCTCCAACACCAACTTCAGGTGAACATTTCCACGGATATACTTACGTTGCTCCTAATCCTTGGCTCTCTTCATCAAGGGTGAACCTATGGCCTGGAATTGTCATATTTGTCTTTTTCCAGCCTTTTGATTTGTTTTTAGCTACCTCTTTTGTAACCCAGAAGTTCATTTCGTATCTACTCTTCTCTCGGTTAAAATGCTTTGTCTTGCCGAGTCCAGAAGACCTGTGTGTTTTTCAAGCTTCTGAATAA 1605 43.68 MVSSSSQKKTFHSLLASKLTKLTIPSSSSSSPSSSSPTTHHDFEFSDLFGHPISSPSASSSFPRDPLQPQMLVIHNRSHSFVGPSPRFAPPSSLPFHQELDSQSEEEEGEEADDEIPDIEGAQNDERKNEIQNSDGNKVVGKIGPTDFEILRVVGKGAFGKVFLVKKTVDDGGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKAKLYLILDFINGGHLFFHLYRQGLFSEDQARIYAAEIVSAVSHLHSCGIVHRDLKPENILVDSDGHVMLTDFGLAKEIDESSRSNSLCGTTEYMAPEILLNKGHNKDADWWSVGILLYEMLSGQPPFTHSNRKKLQEKIIKDKVKLPPYLSSEAHSLLRGLLQKEPSKRLGSGPNGADEIKSHKWLQPINWKKLEAREMQPKFKPDVTGKDCTANFDRCWTVMPPDDSPAPTPTSGEHFHGYTYVAPNPWLSSSRVNLWPGIVIFVFFQPFDLFLATSFVTQKFISYLLFSRLKCFVLPSPEDLCVFQASE 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 545508 550633 + BLOR05316 Blo13g00035 68430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00035 534 SMART pkinase_C_6 410 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo13g00035 534 Pfam Protein kinase domain 148 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00035 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Blo13g00035 534 MobiDBLite consensus disorder prediction 22 42 - -
Blo13g00035 534 MobiDBLite consensus disorder prediction 52 66 - -
Blo13g00035 534 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 476 - -
Blo13g00035 534 ProSiteProfiles Protein kinase domain profile. 148 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00035 534 MobiDBLite consensus disorder prediction 82 138 - -
Blo13g00035 534 MobiDBLite consensus disorder prediction 103 120 - -
Blo13g00035 534 Pfam Protein kinase C terminal domain 430 467 IPR017892 GO:0004674|GO:0005524|GO:0006468
Blo13g00035 534 Gene3D Phosphorylase Kinase; domain 1 146 451 - -
Blo13g00035 534 ProSitePatterns Protein kinases ATP-binding region signature. 154 182 IPR017441 GO:0005524
Blo13g00035 534 SUPERFAMILY Protein kinase-like (PK-like) 147 484 IPR011009 -
Blo13g00035 534 SMART serkin_6 148 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00035 534 ProSiteProfiles AGC-kinase C-terminal domain profile. 410 477 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo13g00035 534 PANTHER RIBOSOMAL PROTEIN S6 KINASE 6 476 - -
Blo13g00035 534 Gene3D Transferase(Phosphotransferase) domain 1 233 428 - -
Blo13g00035 534 MobiDBLite consensus disorder prediction 22 68 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00035 Blo16g00241 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01100 Blo-Chr7:30840272 Blo13g00035 Blo-Chr13:545508 4.60E-165 dispersed
Blo13g00035 Blo-Chr13:545508 Blo17g00858 Blo-Chr17:27963264 7.72E-62 dispersed
Blo13g00942 Blo-Chr13:31857694 Blo13g00035 Blo-Chr13:545508 8.92E-52 dispersed
Blo13g00035 Blo-Chr13:545508 Blo09g00308 Blo-Chr9:13196163 4.85E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84608 PF00069 Pkinase 1.60E-73 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00035 K04688 - csv:101214867 724.546