Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00047 ATGCATGGGAGGGGAGGTGAGGAGAGTAAACGGGCGGCTCGGCACATGTTGACAGTCTCTACGCGTGGCAACACGATTGTAGCGGCCGATGATTTTTCTTCCTCCTCGTCGTCTTCACCTGATTCGTTTTGCAAGTTAAATGGTGTACTTCTCTTCTCTTTTAAGGATGGACGCAAGATTACTCTTGGCAACTGTGCTCTTTTCAAACCACCGCACGATGCTCCACCTTTCATTGGCATAATACGGTGGTTTACTGTTGACAAAGAAAATAAGTTAAAGTTAGGTGTGAACTGGCTCTATCGACCTTCTGAAGTCCAGCTTGGCAAAGGCATCCTATTGGAAACTGCGCCAAACGAAGTTTTCTATTCCTTTCACAGGGATGCAATTCCTGCTGCATCTTTACTTCATCCGTGTAAAGTTGCATTTCTTCCTAAAGACACTGAACTCCCATCAGGAATTTTATCATTTGTGTGCCGGCGTGTCTATGACGTAACCAACAAGTGCTTATGGTGGTTAACTGATAAGGACTATATTAATGAACGCCAAGAAGAGGTAGACCAGTTATTATTTAGGACGCAAATAGAGATGCATACAACAGTGCATCCTGGTGGCCGATCACCCAAGCCAACATCACAATTAAAAGCTAGTTCAGATAGCGTACAAAATGCTGTATCTGCTCAGATAAAAGGGAAGAAAAGGGACAGGGGGGATCAGAGCTCTGAGCCTATTAAACGAGAGCGTAATACAAAAACAGATGAAGGGGAGTATGGTCACTGCAAACTGGAAAGCTTTTTGAAGAGTGAGATTGCCAAAATCACAGACAAGGGAGGTCTTGTAGACTCGGATGGGGTTGAGAAATTGATTCAGCTAATGCTTCCGGAAGCAAGTGATAAAAAAATAGATTTGGCTGGCAGATCAATACTTGCTGGTGTGATAGCATCCACAGAAAAGGTTGAATTGCTTGGTCAGTTTGTACATCATAAGGGTTTGCCTGTTTTTGATGAATGGCTCCAAGAGGTTAACAAAGGAAAATTTGGCGATAGTAGCAGTTCCAAGGAGTGTGATAAGTCAGTTGAAGAATTCCTTTTGATTTTACTCCGTGCCCTTGATAAACTTCCTATAAATCTTCTGTCTTTACAAATGTGTAACATTGGAAAATCTGTGAATCATTTACGAACACACAAGAACATAGAAATTCAGAAGAAAGCTAGAAGTTTAGTAGATACATGGAAGAAACGGGTCGAAGCAGAAATGAGTATCAATGATTCAAAGTCGGGTTCGAATCAAAGTGTTCCTTGGACCACAAAACCCCGTCTTTCTGAAATTTCTCATGGGGGGCGAAACCAAGGTATATCCTCTGAGGCTGCCATGAAGAGTACAGTTACACAGCTTTCTACATCCAAAGCTGCATCAGTTAAGGTTGCACACGATGAGGTAATTGGCAGGTCTGCTTCTGCATCTCCAGGCTCCATGAAATCAGTACCATCACCCGCATCAGCAAGTATTACTTCAAAAGATGGACTTCCCAAAACTCCTGCTGTTAGTAGTGCCAATGATCTTCCTCAAACAGTGGTAAGGGATGAGAAAAGCAGCAGCTCTAGTCAGTCTTACAATAATAGTCAGTCTTGTTCCAGTGAACATGCTAAAACTGGGGGTATGGGAAAGGAGGACGCCAGAAGCTCTACTGCTGGTTCAGTTGCAATGAATAAAGCCCCAGGTGGTTCTTCAAGACAGCGCAAGTCTGTTAATGGTTTCCCTGGCTCTGCTGCCTCTGGAGCCCAAAGGGAAACAATATCAGGAAAAAATACTGTGATGCACATAGGTACAGCTTCAGAGAGAATATCGCAATGTGGAATTTCATGTGACAAGACACCAGATGTAACTTTTGGTGAAGGACACGGTCATAAGTTTATTGTTAAGATCACAAATCGTGGTCGAAGCACAGGACTAATTGCCAATGCTGGATCTGTTGAAGACCAATCATTGTTAAATACTAGGTCCTCTTCTCTAGGTCTTTCTGAGAAGCATGATCATTTTGATTGCAGCTTGAAGGTAAAGGGTGATGCTCATCAAGCTACAATTATTTCAGGTGTGAATACGGAATCCTGGCAAAGTAATGATATTAAGGATGTAGTGTCTAATGATGTGCAAGGTTCCCCTGCTGTTTTTAATGGTGAAGATGGGTGTAGGACTATAGGGGACACCAAAGCTTCAAAAATATTTTCCTCATCACCAGTGAATGAAAATAAAACTGTAAATCTGCAGGAGCCTTCTTTGAGCTCAATAAATGCTTTAATTGACAGTTGTGTAAAATACTCTGAAGCTACTGTTTCAACTTCAGCCGGAGATGATGTGGGAATGAACTTACTTGCTAGTGTGGCTGCTGGAGTGATGTCCAAATCTACCTTAGAATCCCCTACTGATTCTCTGCAAAGAAATCTTGCTGCAATTGATAATTCCGATGTGAAAAATGAATTGAAAGTTGAAGCATCTAATGATGGTGTTAGTGAAAGTAAACAAAATGTTGATGCTAAGTTGGCTTCACAGGATAAAGAGAAGCCTGCTGGGGAACCCAATGGACATTTAGGTTCTTCTGGTTTAATTATGAATGAAACCACAATGGGATCCCTAGAGGTTAAGACAGAAAAGAAAGAAAATATTTCAGCTGTCTCCCCTGTAAGCTCATTTGAGAAAACAAAAGATAGGGATGGAGCTAAACCAGAGAAAACTGCTGCTGGTGTACTGAGTGGAGATATCAAGTTAGAATCTAAAAAAATGTCCAGTTGTTCTTTGACAGATGAAGGTATGGTGAATAATAGTTTTCCAAGTCTAGATGTTGAGGTGGATATGGTTGAGGGATCGTCTTTATCAAATCCATTGTCTGAGTCTAATGGGAAGAATGGTGGGGAACTGATTGAGGAAAAGGCTTCTTTGGAGAAACACCCTGATTCCACTGAAGGTACGAATGATGAAGCTCAACATACTATTGTTTTGGTTGAGGATTTGATCACGGTGAGCTCTAGGGAAATGAATACTGAGAAGCATGATGAAATTGGGGCTATAATTGATTTTAAACGACCAGATAAACAACCTACAGATTGTGATGCTAAAGTTATGCTTGAGATCCAAGATTTGGCACGGGGTTCAACTGCTCCTAATCATGATGGGGAACACTTAAAGGAGAACTTGAAATGTAAAGTTGGTGAACCAAATGGTGGACAAGCTGATCCCAAGGTGCCAATTGTATTTCCCGTAAAAGATGTTGATCAGTGTCTGAAATCTAGGGAATCCAAGTTAAGTGGAATTGAAGCAGAGGAAGCAGATGAATCTACATCTACCACTGCTGATGCTTATTCTGAATCAGCTGCCGGGATATCTGACAATGATACAAAGGTGGGTTTTGATTTGAATGAAGGCTTTGATGTGGATGATGGGAAATGTGGGGATCCTTCTAGCTCTACAGCATCGGACTGCATAGCTAATGTCCGGTTAATTAGCCCAATACTTTTTCCTATATCTGCCGTATCAAGCACCATCCCATCTTCAATTACTGTGGCTGCTGCAGCTAAAGGGCCCTTTGTACCTCCAGAGGACCTATTGAGAAGTAAAGGAGAACTTGGTTGGAAGGGATCAGCTGCCACAAGTGCATTTCGACCAGCTGAACCAAGAAAACTTCTGGAGATGCCGTTTGGTGCAACAAGTACTTCACTTTCTGAGCCCCCAGTCGGAAAAAACAGTCGCCCTCCCTTGGATATTGACTTGAATATACCTGATGAGAGAATCCTTGAAGATATGAATCCTCGAAGTTCTGCTGCGGTGTCAGTCTCCAACAATAGGGAGAATATTAATTTGCGGCATGAAATGGGCTCGAAATCAATGCGGTGTTCAGGTGGCTTTGATCTTGATTTAAACCAAGTCAATGAATTTCCTGATACAAGCAATTATGCAACAAACAATGATTGCAGAACTGATGTTGCATTTTCAGTTAAATCACCTGGTAATCCTCTTCGTAATCATCTCATTGGCGAAGGGAGTGTTCGGCGAGATTTTGATTTGAATGGACCATTTATGGATGAAGCAGGGGTTGAATTGTCACATTTTAGTCCGCATGCCAAGAGCAATGTGCCATCTCAGGCTCCTGTTTCTGGTCTTTGGGTGAATAATGCAGAATTAGGAAACTTGTCTTCATGGTTTCCCCCTGGTAACACTTATCCGAATGCTACAATACCTTCAATCATGACTGATAGGGAAGAGCATTCATTCCCTGTTGTTTCCACTGGTGGATCTCAAAGGATGTTGGGTCCCACAAGTGGTGTCAACCCATTTAGCCCTGATGTTTATCGGGGGCCAATATTGTCTTCATCGCCTGCTGTTCCTTTCCCTTCTGCACCTTTCCAGTATTCTGTATTGTCTTTTGCAAACAGCTTTCCTTTACCATCAGCCAATTATACGACTGGTTCAACGACATACCTGGATTCACAAGGTGGCAGGTTTTGCTTCCCTGCAGTTCATTCACAGTTATTAGGACCCACAGGTCAAGTCTCAACCCATTACCCAAGGCCTTATGTCGTTGGACTTCCAGATGGTAGCAATAGCAGTAGTCCTGAAGTTAGCAAAAAATGGGGAAGACAGGGTTTAGATCTCAATGCTGGACCTGGATGTCCGGATACGGAAGGGAAAGAAGAAACTTTTCCCCTTGCTCCCAGGCAACTATCTATTGTTGGTTCTCAGACGCAGCAAGAGGACCGAGTAAGAATGTATCAACCTGCTGGCAGCGTGGTAAAGAGGAAGGAGCCAGATGGAGGGTGGGATGGTTACAAGCAATCCTCGTGGCAATAA 4839 42.65 MHGRGGEESKRAARHMLTVSTRGNTIVAADDFSSSSSSSPDSFCKLNGVLLFSFKDGRKITLGNCALFKPPHDAPPFIGIIRWFTVDKENKLKLGVNWLYRPSEVQLGKGILLETAPNEVFYSFHRDAIPAASLLHPCKVAFLPKDTELPSGILSFVCRRVYDVTNKCLWWLTDKDYINERQEEVDQLLFRTQIEMHTTVHPGGRSPKPTSQLKASSDSVQNAVSAQIKGKKRDRGDQSSEPIKRERNTKTDEGEYGHCKLESFLKSEIAKITDKGGLVDSDGVEKLIQLMLPEASDKKIDLAGRSILAGVIASTEKVELLGQFVHHKGLPVFDEWLQEVNKGKFGDSSSSKECDKSVEEFLLILLRALDKLPINLLSLQMCNIGKSVNHLRTHKNIEIQKKARSLVDTWKKRVEAEMSINDSKSGSNQSVPWTTKPRLSEISHGGRNQGISSEAAMKSTVTQLSTSKAASVKVAHDEVIGRSASASPGSMKSVPSPASASITSKDGLPKTPAVSSANDLPQTVVRDEKSSSSSQSYNNSQSCSSEHAKTGGMGKEDARSSTAGSVAMNKAPGGSSRQRKSVNGFPGSAASGAQRETISGKNTVMHIGTASERISQCGISCDKTPDVTFGEGHGHKFIVKITNRGRSTGLIANAGSVEDQSLLNTRSSSLGLSEKHDHFDCSLKVKGDAHQATIISGVNTESWQSNDIKDVVSNDVQGSPAVFNGEDGCRTIGDTKASKIFSSSPVNENKTVNLQEPSLSSINALIDSCVKYSEATVSTSAGDDVGMNLLASVAAGVMSKSTLESPTDSLQRNLAAIDNSDVKNELKVEASNDGVSESKQNVDAKLASQDKEKPAGEPNGHLGSSGLIMNETTMGSLEVKTEKKENISAVSPVSSFEKTKDRDGAKPEKTAAGVLSGDIKLESKKMSSCSLTDEGMVNNSFPSLDVEVDMVEGSSLSNPLSESNGKNGGELIEEKASLEKHPDSTEGTNDEAQHTIVLVEDLITVSSREMNTEKHDEIGAIIDFKRPDKQPTDCDAKVMLEIQDLARGSTAPNHDGEHLKENLKCKVGEPNGGQADPKVPIVFPVKDVDQCLKSRESKLSGIEAEEADESTSTTADAYSESAAGISDNDTKVGFDLNEGFDVDDGKCGDPSSSTASDCIANVRLISPILFPISAVSSTIPSSITVAAAAKGPFVPPEDLLRSKGELGWKGSAATSAFRPAEPRKLLEMPFGATSTSLSEPPVGKNSRPPLDIDLNIPDERILEDMNPRSSAAVSVSNNRENINLRHEMGSKSMRCSGGFDLDLNQVNEFPDTSNYATNNDCRTDVAFSVKSPGNPLRNHLIGEGSVRRDFDLNGPFMDEAGVELSHFSPHAKSNVPSQAPVSGLWVNNAELGNLSSWFPPGNTYPNATIPSIMTDREEHSFPVVSTGGSQRMLGPTSGVNPFSPDVYRGPILSSSPAVPFPSAPFQYSVLSFANSFPLPSANYTTGSTTYLDSQGGRFCFPAVHSQLLGPTGQVSTHYPRPYVVGLPDGSNSSSPEVSKKWGRQGLDLNAGPGCPDTEGKEETFPLAPRQLSIVGSQTQQEDRVRMYQPAGSVVKRKEPDGGWDGYKQSSWQ 1612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 695779 701354 + BLOR05328 Blo13g00047 68442

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00047 1612 CDD TFIIS_I 351 415 - -
Blo13g00047 1612 ProSiteProfiles BAH domain profile. 58 173 IPR001025 GO:0003682
Blo13g00047 1612 MobiDBLite consensus disorder prediction 830 911 - -
Blo13g00047 1612 Gene3D - 54 265 IPR043151 -
Blo13g00047 1612 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 322 428 IPR035441 -
Blo13g00047 1612 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 284 418 IPR035441 -
Blo13g00047 1612 SMART TFS2_5 337 416 IPR003617 GO:0005634
Blo13g00047 1612 MobiDBLite consensus disorder prediction 1570 1585 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 1555 1612 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 481 600 - -
Blo13g00047 1612 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1612 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 204 226 - -
Blo13g00047 1612 Pfam TFIIS helical bundle-like domain 365 414 IPR017923 -
Blo13g00047 1612 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1612 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 419 459 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 228 252 - -
Blo13g00047 1612 Pfam BAH domain 60 167 IPR001025 GO:0003682
Blo13g00047 1612 MobiDBLite consensus disorder prediction 196 252 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 1232 1253 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 486 548 - -
Blo13g00047 1612 MobiDBLite consensus disorder prediction 420 459 - -
Blo13g00047 1612 SMART BAH_4 58 173 IPR001025 GO:0003682
Blo13g00047 1612 MobiDBLite consensus disorder prediction 562 600 - -
Blo13g00047 1612 ProSiteProfiles TFIIS N-terminal domain profile. 331 417 IPR017923 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00047 - - - bhj:120071278 1776.91
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo13g00047 Blo15g00276 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00047 Blo-Chr13:695779 Blo17g00339 Blo-Chr17:3557476 2.25E-76 dispersed
Blo19g00318 Blo-Chr19:20557695 Blo13g00047 Blo-Chr13:695779 3.10E-23 transposed
Blo13g00047 Blo-Chr13:695779 Blo15g00276 Blo-Chr15:2985776 0 wgd
Blo13g00047 Blo-Chr13:695779 Blo18g00354 Blo-Chr18:3709939 1.05E-94 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g704 . . . . Bpe12g00585 . . Bma12g01028 . . . . Car10g00132 . Sed08g1505 . Cpe04g01543 Bhi02g00413 Tan09g2404 Cmetu02g1332 . Hepe09g0183 . . Cla06g01645 Cam06g1830 Cec06g1879 Cco06g1885 Clacu06g1789 Cmu06g1731 Cre06g2549 . . Cone13ag0127 Cone19ag0131 . . . . Blo13g00047 Blo15g00276 . . Bpe07g00824 . . Bma08g00176 . Cmo10g00147 Cmo11g00110 . . . . . Cpe18g00833 . . . . . . . . . . . . . . Lsi06g01533 Csa01g00170 Chy02g02561 Cme02g01950
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003613 1 4 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 2 2 1 1 1 1 4 3 1 47
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13111 PF01426 BAH 5.50E-08 No_clan Blo TR