Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00053 ATGAATAGCGTCCATTTCTACACTCCCTCCACCTCCTTGCGCCGATTCCCCAAGTCCTTCTCTCTGCGGAAGAAGGTTCCTCGGTGGTCACAAATTCTCGAACCGGATTCTGAATTCGTAACCAAATGGAACTATGTCTTCCTCGTTACCTGCCTCATCGCCCTCTTTCTCGACCCTCTATACTTCTACCTCCCCACCATCGGGGGACCCGCCTGCATGCAGATCGACATCGGCCTCGGAATTCTCGTCACCTTCTTCCGAACCGTTGCCGACTTGTTCTACCTCTTCAACATGATCATGAAATTCCGAACGGCGTTTGTCGCGCCGAGCTCTAGGGTTTTCGGACGGGGTGAGCTCGTGATGGATCCCAAGGCAATCGCAGCAAGATACCTCAAGTCGAATTTCGTAATCGATCTTGCCGCGACACTTCCGCTACCCCAGATGATCATCTGGTTTGTGATTCCGGCCGTTAAAAGTCCGACAGCTGCGAATGCTAACCACACTCTAGCTCTAATCGTCCTCATCCAATATGCGCCTCGTTTGTTCCTCATTTTCCCGTTAAACCGACGAATCAACAAAACTACCGGAGCAATAGCCAAGACGGCTTGGGTCGGAGCCGCCTACAATCTCCTCCTCTACATGTTAGCCAGCCACGTTATCGGAGCAGCGTGGTATGTGGCATCAATTCAACGGCAGCACGAGTGTTGGAAAATTGAATGTAAAAAGGAGATGAACACCACACACTCTCCATCGTGTGTTTTGTTTTTTCTCGATTGCGATAGTTTGGACAAGCCAGAACGGCGTGCTTGGCTAGGAATCACTCATGTCCTTACCAACTGCGATGCGTCAAATGACGATAAAAACTTTCAGTTCGGAATGTTTGCCGATGCATTTACCGATGATGTTGCCTCCTCGAATTTTATTGAGAAATACTTCTATTGCCTTTGGTGGGGTTTGAAGAATTTAAGTTCATATGGACAGAACATAATGACAAGCACATTTAGCGGTGAAATGCTATTTTCTATCGTGATTTGCTCTCTAGGTTTGGTTCTTTTTTCGCATCTCATCGGCCAAGTTCAGAATTACCTTCAATCTTCGACGGCTAGACTCGAAGAATGGAGGGTCAAACGAAAAGATACTGAGGAATGGATGAGGCATCGACAACTTCCACCCGAGTTACAAGAACGAGTTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGCGTAGACGAAGAATCGATTTTATGCGCTTTGCCTTTAGACCTCAAACGCCAAATTCAAAGACATCTTTGTCTCGCACTTGTTCGTCGTGTTCCATTCTTTGCACAGATGGATGATCAGCTTCTGGACGCCATCTGCGAGAGATTGGTTTCTTCATTGAACACCAAAGACACGTTCATAACCCGAGAAGGTGATCCGGTGAACGAAATGCTTTTTGTCATTCGAGGGCAGCTCGAGAGCTCGACCACCAATGGCGGAAGGTCGGGATTCTTCAACTCCATCACCCTCCGACCGGGGGATTTCTGCGGCGAAGAGTTGCTGACATGGGCGCTGATTCCTTCCTCAAATGTGAACCTTCCTTCTTCGACCCGGACCGTAAAATCTCTCACCGAAGTCGAAGCGTTCGCCCTCCGAGCAGAAGATCTCAAGTTCGTAGCCAGTCAATTCAAGCGGCTGCACAGCAAGAAACTGCAGCACGCCTTTCGATACTACTCTCATCAATGGAGGACGTGGGGAGCTTGCTTTATTCAAGCTGCATGGAGGAGACATGTCAAGAGGAAGCTGGCAATGGAGTTGGCCCGGCAGGAGGAGGCGTACTATTCGTCTGTTCTGGATCAAGAAGATGAAGGCAAAAAAACTGAACTTTCTGGAGAGTTAGACGATGAAGGTGGGGAGAGTTCGAACAGATCTCAGCATTTGGGAGCCATTGTTTTTGCTTCGAAAGTTGCAGCAAATACCAGAAGAGGAGGAGGTAAGGGTAAGGTTTCTGTGCTTGACCCAGATGCTGCCAGCTTGAAGATGCCCAAGCTGTTCAAGCCCGAGGAGCCTGATTTTTCTTCATTCTCTGAAAATCAAGCTTAG 2088 48.37 MNSVHFYTPSTSLRRFPKSFSLRKKVPRWSQILEPDSEFVTKWNYVFLVTCLIALFLDPLYFYLPTIGGPACMQIDIGLGILVTFFRTVADLFYLFNMIMKFRTAFVAPSSRVFGRGELVMDPKAIAARYLKSNFVIDLAATLPLPQMIIWFVIPAVKSPTAANANHTLALIVLIQYAPRLFLIFPLNRRINKTTGAIAKTAWVGAAYNLLLYMLASHVIGAAWYVASIQRQHECWKIECKKEMNTTHSPSCVLFFLDCDSLDKPERRAWLGITHVLTNCDASNDDKNFQFGMFADAFTDDVASSNFIEKYFYCLWWGLKNLSSYGQNIMTSTFSGEMLFSIVICSLGLVLFSHLIGQVQNYLQSSTARLEEWRVKRKDTEEWMRHRQLPPELQERVRRFVQYKWIATRGVDEESILCALPLDLKRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTKDTFITREGDPVNEMLFVIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALIPSSNVNLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRHVKRKLAMELARQEEAYYSSVLDQEDEGKKTELSGELDDEGGESSNRSQHLGAIVFASKVAANTRRGGGKGKVSVLDPDAASLKMPKLFKPEEPDFSSFSENQA 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 779490 782661 + BLOR05334 Blo13g00053 68448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00053 695 Pfam Ion transport protein 43 369 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo13g00053 695 SUPERFAMILY Voltage-gated potassium channels 35 364 - -
Blo13g00053 695 MobiDBLite consensus disorder prediction 618 636 - -
Blo13g00053 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 5 690 - -
Blo13g00053 695 MobiDBLite consensus disorder prediction 618 638 - -
Blo13g00053 695 MobiDBLite consensus disorder prediction 675 695 - -
Blo13g00053 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 690 - -
Blo13g00053 695 Gene3D Helix hairpin bin 368 433 - -
Blo13g00053 695 Pfam Cyclic nucleotide-binding domain 465 553 IPR000595 -
Blo13g00053 695 CDD CAP_ED 442 573 IPR000595 -
Blo13g00053 695 SMART cnmp_10 442 573 IPR000595 -
Blo13g00053 695 Gene3D Jelly Rolls 440 560 IPR014710 -
Blo13g00053 695 SUPERFAMILY cAMP-binding domain-like 371 567 IPR018490 -
Blo13g00053 695 ProSiteProfiles cAMP/cGMP binding motif profile. 442 572 IPR000595 -
Blo13g00053 695 Gene3D - 49 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00466 Blo-Chr10:9677810 Blo13g00053 Blo-Chr13:779490 0 dispersed
Blo13g00053 Blo-Chr13:779490 Blo14g00625 Blo-Chr14:11893334 0 dispersed
Blo13g00053 Blo-Chr13:779490 Blo06g01081 Blo-Chr6:34137623 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00053 K05391 - csv:101209760 1099.73