Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo13g00053 | ATGAATAGCGTCCATTTCTACACTCCCTCCACCTCCTTGCGCCGATTCCCCAAGTCCTTCTCTCTGCGGAAGAAGGTTCCTCGGTGGTCACAAATTCTCGAACCGGATTCTGAATTCGTAACCAAATGGAACTATGTCTTCCTCGTTACCTGCCTCATCGCCCTCTTTCTCGACCCTCTATACTTCTACCTCCCCACCATCGGGGGACCCGCCTGCATGCAGATCGACATCGGCCTCGGAATTCTCGTCACCTTCTTCCGAACCGTTGCCGACTTGTTCTACCTCTTCAACATGATCATGAAATTCCGAACGGCGTTTGTCGCGCCGAGCTCTAGGGTTTTCGGACGGGGTGAGCTCGTGATGGATCCCAAGGCAATCGCAGCAAGATACCTCAAGTCGAATTTCGTAATCGATCTTGCCGCGACACTTCCGCTACCCCAGATGATCATCTGGTTTGTGATTCCGGCCGTTAAAAGTCCGACAGCTGCGAATGCTAACCACACTCTAGCTCTAATCGTCCTCATCCAATATGCGCCTCGTTTGTTCCTCATTTTCCCGTTAAACCGACGAATCAACAAAACTACCGGAGCAATAGCCAAGACGGCTTGGGTCGGAGCCGCCTACAATCTCCTCCTCTACATGTTAGCCAGCCACGTTATCGGAGCAGCGTGGTATGTGGCATCAATTCAACGGCAGCACGAGTGTTGGAAAATTGAATGTAAAAAGGAGATGAACACCACACACTCTCCATCGTGTGTTTTGTTTTTTCTCGATTGCGATAGTTTGGACAAGCCAGAACGGCGTGCTTGGCTAGGAATCACTCATGTCCTTACCAACTGCGATGCGTCAAATGACGATAAAAACTTTCAGTTCGGAATGTTTGCCGATGCATTTACCGATGATGTTGCCTCCTCGAATTTTATTGAGAAATACTTCTATTGCCTTTGGTGGGGTTTGAAGAATTTAAGTTCATATGGACAGAACATAATGACAAGCACATTTAGCGGTGAAATGCTATTTTCTATCGTGATTTGCTCTCTAGGTTTGGTTCTTTTTTCGCATCTCATCGGCCAAGTTCAGAATTACCTTCAATCTTCGACGGCTAGACTCGAAGAATGGAGGGTCAAACGAAAAGATACTGAGGAATGGATGAGGCATCGACAACTTCCACCCGAGTTACAAGAACGAGTTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGCGTAGACGAAGAATCGATTTTATGCGCTTTGCCTTTAGACCTCAAACGCCAAATTCAAAGACATCTTTGTCTCGCACTTGTTCGTCGTGTTCCATTCTTTGCACAGATGGATGATCAGCTTCTGGACGCCATCTGCGAGAGATTGGTTTCTTCATTGAACACCAAAGACACGTTCATAACCCGAGAAGGTGATCCGGTGAACGAAATGCTTTTTGTCATTCGAGGGCAGCTCGAGAGCTCGACCACCAATGGCGGAAGGTCGGGATTCTTCAACTCCATCACCCTCCGACCGGGGGATTTCTGCGGCGAAGAGTTGCTGACATGGGCGCTGATTCCTTCCTCAAATGTGAACCTTCCTTCTTCGACCCGGACCGTAAAATCTCTCACCGAAGTCGAAGCGTTCGCCCTCCGAGCAGAAGATCTCAAGTTCGTAGCCAGTCAATTCAAGCGGCTGCACAGCAAGAAACTGCAGCACGCCTTTCGATACTACTCTCATCAATGGAGGACGTGGGGAGCTTGCTTTATTCAAGCTGCATGGAGGAGACATGTCAAGAGGAAGCTGGCAATGGAGTTGGCCCGGCAGGAGGAGGCGTACTATTCGTCTGTTCTGGATCAAGAAGATGAAGGCAAAAAAACTGAACTTTCTGGAGAGTTAGACGATGAAGGTGGGGAGAGTTCGAACAGATCTCAGCATTTGGGAGCCATTGTTTTTGCTTCGAAAGTTGCAGCAAATACCAGAAGAGGAGGAGGTAAGGGTAAGGTTTCTGTGCTTGACCCAGATGCTGCCAGCTTGAAGATGCCCAAGCTGTTCAAGCCCGAGGAGCCTGATTTTTCTTCATTCTCTGAAAATCAAGCTTAG | 2088 | 48.37 | MNSVHFYTPSTSLRRFPKSFSLRKKVPRWSQILEPDSEFVTKWNYVFLVTCLIALFLDPLYFYLPTIGGPACMQIDIGLGILVTFFRTVADLFYLFNMIMKFRTAFVAPSSRVFGRGELVMDPKAIAARYLKSNFVIDLAATLPLPQMIIWFVIPAVKSPTAANANHTLALIVLIQYAPRLFLIFPLNRRINKTTGAIAKTAWVGAAYNLLLYMLASHVIGAAWYVASIQRQHECWKIECKKEMNTTHSPSCVLFFLDCDSLDKPERRAWLGITHVLTNCDASNDDKNFQFGMFADAFTDDVASSNFIEKYFYCLWWGLKNLSSYGQNIMTSTFSGEMLFSIVICSLGLVLFSHLIGQVQNYLQSSTARLEEWRVKRKDTEEWMRHRQLPPELQERVRRFVQYKWIATRGVDEESILCALPLDLKRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTKDTFITREGDPVNEMLFVIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALIPSSNVNLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRHVKRKLAMELARQEEAYYSSVLDQEDEGKKTELSGELDDEGGESSNRSQHLGAIVFASKVAANTRRGGGKGKVSVLDPDAASLKMPKLFKPEEPDFSSFSENQA | 695 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 779490 | 782661 | + | BLOR05334 | Blo13g00053 | 68448 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo13g00053 | 695 | Pfam | Ion transport protein | 43 | 369 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Blo13g00053 | 695 | SUPERFAMILY | Voltage-gated potassium channels | 35 | 364 | - | - | |
Blo13g00053 | 695 | MobiDBLite | consensus disorder prediction | 618 | 636 | - | - | |
Blo13g00053 | 695 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED | 5 | 690 | - | - | |
Blo13g00053 | 695 | MobiDBLite | consensus disorder prediction | 618 | 638 | - | - | |
Blo13g00053 | 695 | MobiDBLite | consensus disorder prediction | 675 | 695 | - | - | |
Blo13g00053 | 695 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 5 | 690 | - | - | |
Blo13g00053 | 695 | Gene3D | Helix hairpin bin | 368 | 433 | - | - | |
Blo13g00053 | 695 | Pfam | Cyclic nucleotide-binding domain | 465 | 553 | IPR000595 | - | |
Blo13g00053 | 695 | CDD | CAP_ED | 442 | 573 | IPR000595 | - | |
Blo13g00053 | 695 | SMART | cnmp_10 | 442 | 573 | IPR000595 | - | |
Blo13g00053 | 695 | Gene3D | Jelly Rolls | 440 | 560 | IPR014710 | - | |
Blo13g00053 | 695 | SUPERFAMILY | cAMP-binding domain-like | 371 | 567 | IPR018490 | - | |
Blo13g00053 | 695 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 442 | 572 | IPR000595 | - | |
Blo13g00053 | 695 | Gene3D | - | 49 | 366 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo10g00466 | Blo-Chr10:9677810 | Blo13g00053 | Blo-Chr13:779490 | 0 | dispersed | |
Blo13g00053 | Blo-Chr13:779490 | Blo14g00625 | Blo-Chr14:11893334 | 0 | dispersed | |
Blo13g00053 | Blo-Chr13:779490 | Blo06g01081 | Blo-Chr6:34137623 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo13g00053 | K05391 | - | csv:101209760 | 1099.73 |