Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00057 ATGGGCTGCCGGCGACGAAGCGGTGACACGGGAGAGCTCGTGGGCTATCCAGGGCTTGGAATAGGAGCTCGGCGATTCGGCGAATGGGCGATGGTAAGCCAAAAACTGGATTGGATGCAATCGGCGATGGCTAGAATGGCTAAGGCAGGGGTTTCGGTTCGCTGGGCAGCTGCTGGTCTGGTTTGCTTGCGATTGGACCAAACCAGTCCATCCATTGGTTCATGCCTGGTATCCGTGTATGACGAGAAGAACGATAAACAAAATACAAAACAGTCGATGAAAGGTTTACACGGGCAGAGCTTGTGGCTGTGTTCTGATTTAGTTCTGGATCGCAAGGCGATTATGGCTACTCAGTCTGCTCCTCCGGATCCAACTGACAATAAATTTTCAAATACGGCTACAGGACTCAAACAACCATTGAATGAAGATCAGCTGGATGGGAGGGAGATTAACAAACAGACTTCTACAGGATCTGTGTTTGTGAACTCCGAACCAATGCGAGAGGAGCAAGTTCAAAATGCTGTAAAGTTCCTTTCACATCCTAAAGTCAGAGGCTCTCCAGTCATGTATAGAAGGTCATTTCTTGAGAAGAAGGGCCTTACAAAGGAAGAGATTGATGAAGCATTTAGATGTGTGCCTGATCCATCTCCAAGTGCGCAAGCGTCCAATTTAAATAATGGTAAGATTTACTATACAGACGGGGCGGGAAAGTCATCGTCAAACATTCAGCTGCAGGCCCCAATGCAAGCTAGGCAGTCTGCAATTTCTGCTCCTTCTGGTGTTGTGTCCACAGTGGGTACTGTAACTAGGTCTAGATTTCAGTGGATTCATGCTGTTTATGCTGTAGGAATACTGGCCGTTTCAGGTGCTGGATCAGTTTTAATAATGAAGAAAGCAATAGTTCCCAGGTTGAAATCTTGGATACGAAAGATTGTATTGGAAGAAGATGATGACCTTGCAAAGAAAAATGATGCCAAACCTAGTTTGGCCGAAGAAGCAGCAGCTGCAGCAAAGGCAGCTGCTGCTGCAGCAACAGACGTGGCCAAGGCTAGCCAGGAAATGCTGTATTCAAAAAATGAAGAGAGAAGAAAATTTGAGGAATTTGTCAACATTTTAGACGCACAAGTTCGAGAAATGAAGGTCATGACTAGTGCACTTCAAAGATTGGAAGGACAAACTAATAGCCAGGGAAGAACGTCTGCTGGTTATCTAGAAGATCCTCGAGCAATTGTTACGAGTTCTAAGCAATACGCCAACGGGAAGGCAGAATACGATGCCCGATCAGTGAGATCATCCTCACCTCCCTCTGCCGCGGAACCCCAATCTGCACCACACTCAAAGTCATATATGGAGTTTGAGCTGGAGGGGCCATTATTACTGATGTCAATATCTAATGTCGCGGGTAATTTCTATTTCGTATGGAGTTATTTGATTTCTATTGTTTTGATTCAGATTGTGGCCATGGTCCAAAGAGGAGAGAAACCTGCCAATATCAGAGATATCAATGATCAACCTCCAAACCCAAATCAGCAACTGTCGAATCCTCGCTTGGCGCCAAGAGCCAAGCCTTGGGATGCCGTCCCCACTCGAAATAACCCCCATCCTTTCCTCCAGTCTCAAGGAAGCGGAGACGGATCAAATCAGATGGTGCAAGATAATGGGGTAACTTATCGGATCAACGGTGAGAGTACACAGCCGTGGTGGCAACGAAAAAATGTCAGAATCACAGAAATTGAAAATGAAGATGAGCCAAAACTAGGAGTCAGCAGTGGCACTATATCTGAACCATCGGTTCGGTGGGTCCCACCGCAGCCACCACCAGTGGCGATGGCCGAGGCAGCCGAAGCGATCCGTCGGCCTAAAGCTTTGATCCAGAAAGAGCAAATGAACGATGAGCAATTGTTAACGCGCGCAAATGTAACGGATGAGCTGCAGAGGATCACAAAAGTGTCTGAATCAGGTGGAGCTGTTGATATTGGGACCGGAAGCTTAGCCGTAAGCGAGAATGAAATTCAAGAAATTTGA 2025 46.77 MGCRRRSGDTGELVGYPGLGIGARRFGEWAMVSQKLDWMQSAMARMAKAGVSVRWAAAGLVCLRLDQTSPSIGSCLVSVYDEKNDKQNTKQSMKGLHGQSLWLCSDLVLDRKAIMATQSAPPDPTDNKFSNTATGLKQPLNEDQLDGREINKQTSTGSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVMYRRSFLEKKGLTKEEIDEAFRCVPDPSPSAQASNLNNGKIYYTDGAGKSSSNIQLQAPMQARQSAISAPSGVVSTVGTVTRSRFQWIHAVYAVGILAVSGAGSVLIMKKAIVPRLKSWIRKIVLEEDDDLAKKNDAKPSLAEEAAAAAKAAAAAATDVAKASQEMLYSKNEERRKFEEFVNILDAQVREMKVMTSALQRLEGQTNSQGRTSAGYLEDPRAIVTSSKQYANGKAEYDARSVRSSSPPSAAEPQSAPHSKSYMEFELEGPLLLMSISNVAGNFYFVWSYLISIVLIQIVAMVQRGEKPANIRDINDQPPNPNQQLSNPRLAPRAKPWDAVPTRNNPHPFLQSQGSGDGSNQMVQDNGVTYRINGESTQPWWQRKNVRITEIENEDEPKLGVSSGTISEPSVRWVPPQPPPVAMAEAAEAIRRPKALIQKEQMNDEQLLTRANVTDELQRITKVSESGGAVDIGTGSLAVSENEIQEI 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 866282 880826 + BLOR05338 Blo13g00057 68452

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00057 674 MobiDBLite consensus disorder prediction 497 548 - -
Blo13g00057 674 MobiDBLite consensus disorder prediction 532 548 - -
Blo13g00057 674 Gene3D - 159 224 IPR036388 -
Blo13g00057 674 MobiDBLite consensus disorder prediction 429 443 - -
Blo13g00057 674 Pfam Pex14 N-terminal domain 167 210 IPR006785 -
Blo13g00057 674 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 123 451 - -
Blo13g00057 674 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 483 665 - -
Blo13g00057 674 MobiDBLite consensus disorder prediction 422 446 - -
Blo13g00057 674 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 123 451 IPR025655 GO:0005515|GO:0005778|GO:0016560
Blo13g00057 674 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 483 665 IPR025655 GO:0005515|GO:0005778|GO:0016560
Blo13g00057 674 MobiDBLite consensus disorder prediction 502 516 - -
Blo13g00057 674 MobiDBLite consensus disorder prediction 582 604 - -
Blo13g00057 674 Coils Coil 372 392 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00057 K13343 PEX14; peroxin-14 - jre:108991475 546.199
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo13g00057 Blo15g00268 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00057 Blo-Chr13:866282 Blo14g00633 Blo-Chr14:12480590 1.84E-08 dispersed
Blo13g00057 Blo-Chr13:866282 Blo15g00268 Blo-Chr15:2897427 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g746 . . . . . . . Bma12g01035 . . . Cma11g00095 Car10g00115 Car11g00095 . . . . . . . . . . . . . . . . . . . . . . . . . Blo13g00057 Blo15g00268 . . . . . . . . Cmo11g00095 . . . . . . . . . . . . . . . . . . . . . . . Cme02g01981
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005495 1 2 2 2 1 0 2 0 1 1 1 0 1 1 1 1 0 3 1 0 1 2 1 2 2 0 2 5 3 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00057 Blo_Chr13 FPKM 8.415929 6.156464 3.56405 3.574414 9.983058 13.714991 10.848863 6.140509 6.222066 6.881305