Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo13g00089 | TCCATAGTTTCCCTCTCTACCCTCTTTTTGTCTCTCCTCCTCGCCATTCTCTTCTCTCCAACGTCCACCCTTGCAAGCGAAACAAAGCTCCAAGGCCTCAACATCAACGCCATTGACAAGTGCTGGAGATTAAACCCAGACTGGAGAAGACACCGCCAGCAGCTGGCGACCTGCTCCGTTGGATTTGCAGGCAAGATGATCAACAATATAGGCAAGAATCTGCAACAGTACAGAGTTACAGACCCGAGCGATGACCCATTGAACCCGAAGAAGGGAACTCTCAGATATGGAGCCACCATGATTAAGGGCAAAGTATGGATCACATTTCAGAGAAACATGGTCATCAAACTCGAAAGACCGCTTCTCATCAGCAGCTTCACAGCCATTGACGGCCGAGGAGTTAGAGTCCATATAACTGGAAATGCGTGCTTGACAGTTTACAAGGAATCCAATATAATAATTCATGGTCTAGTAATCCACCACTGCAAGTCTCAAGCTGCAACCCAAGTGATGGGAACTAACGGGAAGATAGTGGGAATGGGCAATGTCGATGGCGATGCCATCCGGCTCGTCACGGCGTCAAAGGTGTGGATCGACCACAACACACTCTACCAGTGCCAGGACGGGTTGCTGGACGTAACAAGAGGGTCGACAGACATCACAATCTCGAACAATTGGTTTAGGGATCAAGACAAAGTTATGCTTTTGGGACATGATGATGGGTATGTTAGAGACAAGGACATGAGAGTCACTCTTGCTTTCAACCATTTTGGACCGAATTGCAACCAACGGATGCCTCGGATCCGACACGGCTATGCACATGTCATGAACAACCTATACCAGGGATGGACTCAATACGCCATTGGCGGTAGCATGAATCCGAGAGTTAAGAGTGAGGCCAACCTATTCATCGCGCCTAAATCTGGAAGCAAGGAGTTGATATGGACAACAGGAGGGCTGGGAGGGAAGAGCTCATGGAAGTTTTTCTCAGTAGGAGATGTTCTTGAAAATGGAGCTACTTTCAGTGAAGCAGGCACACAATTGAGCCTGAGGACAATAGCTGCAAAGCCAGGCTACAACGCCCAACAATGGCTCAAAGTAGCAGAAGCTAACTATGTAAGACAATTGACAAGCTCTGCAGGAGCTCTAAAATGCAGCAGAAATTCAAGATGC | 1173 | 48.0 | SIVSLSTLFLSLLLAILFSPTSTLASETKLQGLNINAIDKCWRLNPDWRRHRQQLATCSVGFAGKMINNIGKNLQQYRVTDPSDDPLNPKKGTLRYGATMIKGKVWITFQRNMVIKLERPLLISSFTAIDGRGVRVHITGNACLTVYKESNIIIHGLVIHHCKSQAATQVMGTNGKIVGMGNVDGDAIRLVTASKVWIDHNTLYQCQDGLLDVTRGSTDITISNNWFRDQDKVMLLGHDDGYVRDKDMRVTLAFNHFGPNCNQRMPRIRHGYAHVMNNLYQGWTQYAIGGSMNPRVKSEANLFIAPKSGSKELIWTTGGLGGKSSWKFFSVGDVLENGATFSEAGTQLSLRTIAAKPGYNAQQWLKVAEANYVRQLTSSAGALKCSRNSRC | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 1548769 | 1550501 | - | BLOR05370 | Blo13g00089 | 68484 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo13g00089 | 391 | Gene3D | - | 35 | 384 | IPR012334 | - | |
Blo13g00089 | 391 | PRINTS | Pollen allergen Amb family signature | 58 | 75 | IPR018082 | - | |
Blo13g00089 | 391 | PRINTS | Pollen allergen Amb family signature | 326 | 350 | IPR018082 | - | |
Blo13g00089 | 391 | PRINTS | Pollen allergen Amb family signature | 286 | 305 | IPR018082 | - | |
Blo13g00089 | 391 | PRINTS | Pollen allergen Amb family signature | 184 | 205 | IPR018082 | - | |
Blo13g00089 | 391 | PRINTS | Pollen allergen Amb family signature | 264 | 283 | IPR018082 | - | |
Blo13g00089 | 391 | PRINTS | Pollen allergen Amb family signature | 120 | 136 | IPR018082 | - | |
Blo13g00089 | 391 | PANTHER | PECTATE LYASE 18-RELATED | 20 | 388 | IPR045032 | GO:0030570 | |
Blo13g00089 | 391 | PANTHER | PECTATE LYASE | 20 | 388 | - | - | |
Blo13g00089 | 391 | SUPERFAMILY | Pectin lyase-like | 32 | 385 | IPR011050 | - | |
Blo13g00089 | 391 | Pfam | Pectate lyase | 141 | 303 | IPR002022 | - | |
Blo13g00089 | 391 | SMART | amb_all | 112 | 309 | IPR002022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo13g00089 | Blo-Chr13:1548769 | Blo11g00727 | Blo-Chr11:9288708 | 5.48E-102 | dispersed | |
Blo13g00089 | Blo-Chr13:1548769 | Blo16g00243 | Blo-Chr16:5643367 | 4.86E-102 | transposed | |
Blo13g00089 | Blo-Chr13:1548769 | Blo12g00125 | Blo-Chr12:8720829 | 2.07E-98 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo13g00089 | K01728 | - | zju:107419631 | 560.066 |