Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo13g00109 | ATGGTGAGGAAAAAGAGAGGTGAGGGTGAGAGCTCGGAGGCTAAGGAAGCAAGTGGTGGTGGAAGCCGAGGTGTTGCTCAGCAGCAAGGCGAAAGGGGTGGGCGACCTCATCAGCAACAACGAGGAAGAGGTTGGGGTCCTCAAGGTGGTCTAGGAGGCCCCCATGGTGGTGGTGGAGGCCGAGGCCGTGGAATGCCTCAACAGCAATGGCAACAGCAACAACAACAACAACAACAACAACAACGACAACAACAGGATGAATATCAAGGAAGAGGCAGGGGAGGACCACCTCTGCAGGGTAGTGGTCATGGTGGCTATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGGGCTATGGTGGAGAATTGCCTCCTGCAGGTGGGCCGTTCAGACCACCTGTCTCCGAGCTGCACCAAGCTTCCTCGGCTCCATATCATGTTGGGGTGACTCAGCCCACACCAGGTGGGGGTGGTCCTTCTTCTAGTCTGCCTGAAACATCACAGATGGAGCAACAGTTTGAGCAGTTATCCGTTCAGCAGGAAGCTGCTTCTAGTCAAGCAATTCAGCCAATGCCACCTTCCAGCAAATCAATGAGGTTCCCACTTCGCCCTGGAAAGGGTAGCACTGGTAAAATGTGCATTGTGAGGGCTAATCACTTTTTTGCTGAACTTCCCAACAAAGATCTTCATCAGTATGATGTTACAATTACCCCAGAGCTGACTGCACGAGGTGTTAATCGTGCTATAATGAATCAGTTAGTGAGATCTTACAGGGAGTCTCACCTTGGTAAGAGGCTTCCGGTCTATGATGGTAGGAAAAGTCTGTATACTGCAGGTCCTCTTCCATTTCAATCAAAGGAATTTCAAATCACTCTCTTGGATGAAGATGATGGATCAGGCTCTCAAAGGAGGGAGAGGAATTTTAAGGTTGTGATCAAATTTGCTGCACGAGCTGACCTACATCATTTAGGGCTCTTTTTGGAAGGCAGACAGGCAGACGCCCCTCAGGAAGCCCTTCAAGTTCTGGACATTGTCCTTCGCGAACTGCCTACCACGAGATATTGTCCTGTTGCACGATCATTTTATGCTCCTGGTCTGGGAAGGCGTCAGCAGCTGGGCGAGGGATTGGAAAGTTGGCGTGGCTTTTATCAAAGTATTCGACCAACGCAAATGGGACTGTCTCTTAATATTGATATGTCTTCTACTGCTTTTATTGAGCCATTGCCAGTCATTGATTTTGTTACACAACTTCTGAATCGAGATGTGTCATCTCGGACACTGTCCGATGCTGATCGTGTGAAGATAAAGAAAGCTTTACGAGGTGTCAAGGTTGAAGTCACACACCGAGGTAACATGCGAAGAAAGTATCGTATTTCTGGTCTAACATCGCAGGCAACTAGAGAACTTACTTTCCCAATTGATGAGATGGGTACAATGAAATCTGTTGTCGAGTATTTTTGTGAAACCTATGGTTTCGTAATTCATCATACTCATTGGCCTTGTCTACAAGTTGGAAACCAGCAGAGACCTAATTATTTACCAATGGAGGTATGCAAGATTGTTGAGGGCCAGAGGTACTCAAAGAAACTGAACAATAAACAGATATCAGCATTGTTGAAAGTCACCTGCCAGCGTCCTCAGGAAAGGGAGAAAGATATAATGCAGACTGTTAGGCATAATGCATATCATAATGATCCGTATGCAAAGGAGTTTGGGATTAAGATCAGTGAACAGCTTGCTTCTGTTGAAGCCCGTATCCTTCCTGCACCTTGGCTCAAATACCATGACACAGGAAAGGAAAAAGATTGTTTGCCGGAAGTGGGGCAATGGAACATGATGAATAAGAAAATGGTTAATGGTGGTACAGTTAACAACTGGATGTGCATTAATTTTTCTCGTCCTGTACAAGACAATGCTGCCCAAGAATTCTGCAGGGCACTCGCTCAAATGTGTAATATATCTGGAATGGCTTACAATCCAGAACCAGTACTTCCTGTAATTAGTGCTCGTCCTGATCAAGTGGAGAAGATTCTTAAAACCCGGTATCATGATGCAATGACAAAACTTCGGCCACAACGCAAAGAACTCGATTTGCTTATTGTTATTCTTCCAGATGAAAATGGGTCCCTATATGGTGATTTGAAGCGAATTTGTGAGACCGATCTTGGTCTTGTTTCACAATGCTGTTTGACAAAGCATGTGTTCAAGATGAGTAAACAATATTTAGCTAATGTGGCTTTGAAGATTAATGTGAAAGTTGGGGGAAGGAATACAGTACTTGTCGATGCTGTTTTAAGGCAGATTCCTTTGGTTAGCGATATTCCTACTATCATTTTTGGTGCTGACGTTACTCATCCTCCTCCAGGGGAGGATTCTAGCCCCTCCATTGCTGCTGTTGTGGCTTCCCAAGATTGGCCTGAAGTTACCAAGTATGCTGGTTTGGTTTCTGCCCAGGCACACAGACAAGAGCTCATTCAAGATCTGTTTAAACAATGGCAAGATCCAGTAAGAGGAACAGTATCTGGAGGAATGATCAAGGAACTCCTCATATCATTCCGAAGAGCTACTGGACACAAACCTCAACGAATAATCTTTTACAGGGATGGAGTGAGCGAGGGACAGTTCTATCAGGTTTTGCTGCATGAACTTGATGCTATTCGGGAGGCATGTAATTCTTTAGAACCCAATTATCAGCCTCGGGTTACATTTGTTGTAGTTCAGAAGCGGCACCACACTCGATTATTTGCTAACAACCATCGTGATTACAATACAGTTGACCGGAGTGGCAACATATTACCTGGTACGGTTGTGGACTCTAAAATTTGTCATCCTACTGAATTTGACTTCTACCTATGCAGCCATGCCGGAATACATGGTACTAGCCGCCCAACTCACTACCATGTTCTATGGGATGAGAACAAGTTCACAGCTGATGGGTTGCAATCTCTGACCAATAACCTTTGCTACACATATGCTAGGTGTACACGATCTGTGTCCATTGTTCCGCCTGCATACTATGCCCATCTTGCTGCATTTAGAGCTCGATTCTACATGGAGCCAGAGACGTCGGATAGTGGGTCAATGACGAGTGGAGCTGCAGCCGGACGGGGTGGCATGGGTGCTCGTGGCTCTCCCCCACCGGGGGCAACTGCAGTGAGGCCTTTGCCTGCGCTGAAGGAGAATGTTAAACGAGTTATGTTTTACTGCTAG | 3207 | 46.3 | MVRKKRGEGESSEAKEASGGGSRGVAQQQGERGGRPHQQQRGRGWGPQGGLGGPHGGGGGRGRGMPQQQWQQQQQQQQQQQRQQQDEYQGRGRGGPPLQGSGHGGYGGGGGGGGGGGYGGELPPAGGPFRPPVSELHQASSAPYHVGVTQPTPGGGGPSSSLPETSQMEQQFEQLSVQQEAASSQAIQPMPPSSKSMRFPLRPGKGSTGKMCIVRANHFFAELPNKDLHQYDVTITPELTARGVNRAIMNQLVRSYRESHLGKRLPVYDGRKSLYTAGPLPFQSKEFQITLLDEDDGSGSQRRERNFKVVIKFAARADLHHLGLFLEGRQADAPQEALQVLDIVLRELPTTRYCPVARSFYAPGLGRRQQLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRTLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPIDEMGTMKSVVEYFCETYGFVIHHTHWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKKLNNKQISALLKVTCQRPQEREKDIMQTVRHNAYHNDPYAKEFGIKISEQLASVEARILPAPWLKYHDTGKEKDCLPEVGQWNMMNKKMVNGGTVNNWMCINFSRPVQDNAAQEFCRALAQMCNISGMAYNPEPVLPVISARPDQVEKILKTRYHDAMTKLRPQRKELDLLIVILPDENGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDAVLRQIPLVSDIPTIIFGADVTHPPPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKQWQDPVRGTVSGGMIKELLISFRRATGHKPQRIIFYRDGVSEGQFYQVLLHELDAIREACNSLEPNYQPRVTFVVVQKRHHTRLFANNHRDYNTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIHGTSRPTHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAAAGRGGMGARGSPPPGATAVRPLPALKENVKRVMFYC | 1068 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 2042432 | 2049751 | - | BLOR05390 | Blo13g00109 | 68504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo13g00109 | 1068 | MobiDBLite | consensus disorder prediction | 1 | 200 | - | - | |
| Blo13g00109 | 1068 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 93 | 1067 | - | - | |
| Blo13g00109 | 1068 | Pfam | Argonaute linker 2 domain | 547 | 593 | IPR032472 | - | |
| Blo13g00109 | 1068 | Pfam | Glycine-rich region of argonaut | 85 | 192 | IPR024357 | - | |
| Blo13g00109 | 1068 | CDD | PAZ_argonaute_like | 406 | 520 | - | - | |
| Blo13g00109 | 1068 | CDD | Piwi_ago-like | 565 | 1017 | IPR045246 | - | |
| Blo13g00109 | 1068 | MobiDBLite | consensus disorder prediction | 1020 | 1052 | - | - | |
| Blo13g00109 | 1068 | Coils | Coil | 67 | 87 | - | - | |
| Blo13g00109 | 1068 | Pfam | Argonaute linker 1 domain | 356 | 405 | IPR014811 | - | |
| Blo13g00109 | 1068 | Pfam | Mid domain of argonaute | 604 | 679 | IPR032473 | - | |
| Blo13g00109 | 1068 | SMART | Piwi_a_2 | 697 | 1018 | IPR003165 | GO:0003676 | |
| Blo13g00109 | 1068 | PANTHER | PROTEIN ARGONAUTE 1A | 93 | 1067 | - | - | |
| Blo13g00109 | 1068 | MobiDBLite | consensus disorder prediction | 143 | 192 | - | - | |
| Blo13g00109 | 1068 | Pfam | PAZ domain | 411 | 536 | IPR003100 | GO:0005515 | |
| Blo13g00109 | 1068 | SUPERFAMILY | Ribonuclease H-like | 692 | 1018 | IPR012337 | - | |
| Blo13g00109 | 1068 | SMART | DUF1785_2 | 354 | 406 | IPR014811 | - | |
| Blo13g00109 | 1068 | Pfam | Piwi domain | 698 | 1017 | IPR003165 | GO:0003676 | |
| Blo13g00109 | 1068 | Pfam | N-terminal domain of argonaute | 212 | 345 | IPR032474 | - | |
| Blo13g00109 | 1068 | Gene3D | - | 585 | 760 | - | - | |
| Blo13g00109 | 1068 | ProSiteProfiles | Piwi domain profile. | 697 | 1018 | IPR003165 | GO:0003676 | |
| Blo13g00109 | 1068 | MobiDBLite | consensus disorder prediction | 65 | 88 | - | - | |
| Blo13g00109 | 1068 | Gene3D | paz domain | 400 | 525 | - | - | |
| Blo13g00109 | 1068 | Gene3D | - | 766 | 1068 | IPR036397 | GO:0003676 | |
| Blo13g00109 | 1068 | ProSiteProfiles | PAZ domain profile. | 407 | 521 | IPR003100 | GO:0005515 | |
| Blo13g00109 | 1068 | SUPERFAMILY | PAZ domain | 401 | 561 | IPR036085 | GO:0005515 | |
| Blo13g00109 | 1068 | SMART | PAZ_2_a_3 | 411 | 543 | IPR003100 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g01233 | Blo-Chr1:46585136 | Blo13g00109 | Blo-Chr13:2042432 | 1.48E-61 | dispersed | |
| Blo02g00591 | Blo-Chr2:11306131 | Blo13g00109 | Blo-Chr13:2042432 | 2.84E-163 | dispersed | |
| Blo03g01067 | Blo-Chr3:37048208 | Blo13g00109 | Blo-Chr13:2042432 | 0 | dispersed | |
| Blo06g00918 | Blo-Chr6:32438208 | Blo13g00109 | Blo-Chr13:2042432 | 0 | dispersed | |
| Blo08g00144 | Blo-Chr8:1534041 | Blo13g00109 | Blo-Chr13:2042432 | 1.67E-140 | dispersed | |
| Blo11g00190 | Blo-Chr11:1501109 | Blo13g00109 | Blo-Chr13:2042432 | 1.10E-144 | dispersed | |
| Blo13g00109 | Blo-Chr13:2042432 | Blo14g00312 | Blo-Chr14:3201913 | 1.19E-135 | dispersed | |
| Blo13g00109 | Blo-Chr13:2042432 | Blo07g00235 | Blo-Chr7:2953226 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo13g00109 | K11593 | - | qsu:111993289 | 1625.14 |