Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00116 ATGGCTGGTGTTGATAAAGACAATATTCCAATGCTTTCAGACACAAACCCATCACTGTATGATGAACAAGTGAATTCTCAATTCGGGTCATTGAATTCTTCGGCACGAAATGAATCAGTTTTAGTTCCGATCCAAGCTAATCCCTTTAGCTATACAGGCCCTCTACGGAGTGAAAGAAAAGCTCCTTTTCCACAGATGAGTGGTCCTTTATTAATCAAGCATAACCCTGTGGGAGGAGTATTTCAGTCAAATACAAGTAATTTAGAGCAATCAACTAAAGAACCAATGAAGGAAAATTTTCGTTCTCTGGAGGTAAGCGGCTGGGCAGGTTGGTCCAATAGAAACGACAGCAGAAAAAATGAACATTTATTGAAGTCTGGTCAATTGGGACAGTGTAATGATCCTTATTGTACGACATGCCCGACGTACAATATCAAAACTGCACAGCGGAAGAGCTCCAGAGCCTCTGGCATTTTTGAACACAAGTTTCATAATGCGCTCTACGGTGACGCAAAAGGCTGGGCAAGGAAGTTTGGGTCTTTTCTTCAACCATGTATTCCAAGAGTAATGAATCCTCATACGAAAATTATCCAAAAGTGGAACAAGTTTTTTGTTATTTCTTGTTTGGTGGCGATCTTTTTGGACCCGTTATTTTTCTTCCTACTCTCTGTCCAACAGGCGAATTTTTGCATAGTTTTAGATTGGCCCATGACTACAGCACTGGTGGTTTTCCGAAGTGTAACTGATTTCATTTACATCCTCCACATCCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCGGAGTCTAGAGTAGTTGGTGCAGGAGAGTTAGTGGACCATCCAAAGAAAATTGCTCGGAATTACCTTCGTGGTTTCTTTGTTGTTGACTTATTTATCATAATTTTGTTGATACTACCAAGATCGCTTGGAACATCTGGAGCAAACTACGCAAAAAATCTTCTACGTGCGGCAATTCTTGTGCAATATATACCCAAATTGTCTAGATTTTTGCCACTTTTGATTGGTCAGACTCCAAGTGGCTTTGTATTTGAGTCAGCATGGGCCAATTTTGTTCTCAATCTTTTCACCTTTATGTTGTCTGCCCATGTCGTCGGCTCTTTCTGGTATCTCTTTGGATTGCAGAGGGTCAACCAATGTTTTCGAGACGCCTGCCAAGACTCCGGGATTCAATCGTGCATGACATTTATAGATTGTGGACATGGTGATAATCTTGACAGATTTGATTCCTATCCTACATGGCAGAGCTGGACAAACAATACGAATGCTAGCTCTTGCTTATCATCGTCGGGTGCATTTTCTTACGGAATATACGGTCAAGCTGTCGATCTTACCTTAGAAAGTAGCATAGTTACGAGATATATTTACTCACTCTTTTGGGGATTTCTGCAAATCAGTACTCTTGCTGGGAACCAAGTACCAAGTTATTTTGTGTGGGAAGTTCTGTTCACTATGGCCATTATTGGACTTGGTCTTTTGTTATTTGCTCTACTCATTGGAAATATGCAAAACTTCCTTCAGGCTCTTGGTCAGAGGAGGTCAAAAATGTCGTTAAGACGACGTGATGTCGAGTTATGGATGGGGCATCGGCGTTTGCCTGAAGAACTAAGAAGACAAGTACGAGAAGCCGAAAGGTATAGTTGGGCTGCAACAAGAGGTGTCAATGAAGAAACACTTTTGGAGAATTTGCCTGAAGACCTTCAAAGAAATATACGACGACATCTCTTTACATTTCTAAAGAAAGTCCGGATTTTCTCTTTGATGGATGAACCTATTCTAGATTCGATACGGGAGAAATTGAGACAGAAGACTTATATAAAAGGAAGTGAAGTTTTTTTCAACGGTGGTTTTATCGAGAAGATGGTTTTCATCGTTCGAGGAAAAATGGAGAGTTGTGGGGCCGATGGGATCGTGCTTCCCTTGTCGGAAGGAGACGTTTGTGGGGAGGAACTTCTCACTTGGTGTCTCGAACATTCTTCTGTGTATAAAGATGGAAAACGAATGGGAATTTCCGGCCAGAGATTGATTAGCAATCGGACGGTGCATTGCTTGACAAACGTAGAAGCATTTTCACTCCATGCGGCAGATATTGAACAAGTGACGAGTGTCTTCGCACGGTTTCTGCGAAATCAACGCGTTCAAGGAGCCATAAGGTATGAATCGCCTTACTGGAGATGCTTAGCTGCTAATCGGATTCAAGTAGCGTGGAGATACAGGAAAAAGCGTCAAACTCGTGTCGACTCATTAAGGCCGGAAGAATTTTCGAGCTATTTTTTAAAAAATATGTACTTTTAG 2313 41.59 MAGVDKDNIPMLSDTNPSLYDEQVNSQFGSLNSSARNESVLVPIQANPFSYTGPLRSERKAPFPQMSGPLLIKHNPVGGVFQSNTSNLEQSTKEPMKENFRSLEVSGWAGWSNRNDSRKNEHLLKSGQLGQCNDPYCTTCPTYNIKTAQRKSSRASGIFEHKFHNALYGDAKGWARKFGSFLQPCIPRVMNPHTKIIQKWNKFFVISCLVAIFLDPLFFFLLSVQQANFCIVLDWPMTTALVVFRSVTDFIYILHILLQFRLAYVAPESRVVGAGELVDHPKKIARNYLRGFFVVDLFIIILLILPRSLGTSGANYAKNLLRAAILVQYIPKLSRFLPLLIGQTPSGFVFESAWANFVLNLFTFMLSAHVVGSFWYLFGLQRVNQCFRDACQDSGIQSCMTFIDCGHGDNLDRFDSYPTWQSWTNNTNASSCLSSSGAFSYGIYGQAVDLTLESSIVTRYIYSLFWGFLQISTLAGNQVPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGQRRSKMSLRRRDVELWMGHRRLPEELRRQVREAERYSWAATRGVNEETLLENLPEDLQRNIRRHLFTFLKKVRIFSLMDEPILDSIREKLRQKTYIKGSEVFFNGGFIEKMVFIVRGKMESCGADGIVLPLSEGDVCGEELLTWCLEHSSVYKDGKRMGISGQRLISNRTVHCLTNVEAFSLHAADIEQVTSVFARFLRNQRVQGAIRYESPYWRCLAANRIQVAWRYRKKRQTRVDSLRPEEFSSYFLKNMYF 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2340115 2347192 - BLOR05397 Blo13g00116 68511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00116 770 MobiDBLite consensus disorder prediction 1 20 - -
Blo13g00116 770 SMART cnmp_10 590 725 IPR000595 -
Blo13g00116 770 ProSiteProfiles cAMP/cGMP binding motif profile. 590 658 IPR000595 -
Blo13g00116 770 Gene3D - 201 515 - -
Blo13g00116 770 SUPERFAMILY cAMP-binding domain-like 517 713 IPR018490 -
Blo13g00116 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 145 754 - -
Blo13g00116 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 145 754 - -
Blo13g00116 770 SUPERFAMILY Voltage-gated potassium channels 192 513 - -
Blo13g00116 770 CDD CAP_ED 590 706 IPR000595 -
Blo13g00116 770 Pfam Ion transport protein 200 519 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo13g00116 770 Gene3D Jelly Rolls 588 712 IPR014710 -
Blo13g00116 770 Gene3D Helix hairpin bin 518 582 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00116 Blo-Chr13:2340115 Blo06g01081 Blo-Chr6:34137623 1.36E-126 dispersed
Blo13g00116 Blo-Chr13:2340115 Blo15g00035 Blo-Chr15:280556 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00116 K05391 - jre:109012085 1052.35