Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00123 ATGATAAGAAACGAAAGGAAAGGAAAAGGAAGGAGTAAGGGAGTTGGGGGGCGGATGGGTAGCGAAACTATTCCGCGGCTAGGCGAAGCCCTATACCTTGGTGGGAACGGGGACTTAGTTGCAAGTAAAGGTAACAAAGTGATCTTGCCAGAAGCAGAGGAGGCCTTACCCGTGGAGCCTGCGGTGTACTCGGAGGAAACGCGACTAAAGATGCCACCGTCGATCGTGAATCTCCGATTCGTTCCACGAATCGGACCTCCAGCCAAAGCTCGATCACTAGAACATTTCGGAAGCTATTTCAAAGAATACAGCAGTAGCGGGAAGGTTGAATTCATCATATCCATGGTTTTCAAAGGCAGGTTCTTTTCCTCTTCTAGGAAGTCTGATTCTTCAAGTCCAGATGGATCCAATAGTCCTCGATTCCTGGGTTCAAACTCGCCAATCAGATCCGACAAGAAGAAATCGAAATCTGGGACGAAAGAGGATGCTTCTATCTCTGACCTCGGTGCCTCTGGAATCGGCAATTTTGGCGGAGTTGGTTCGAAAGATGGAGCGAAGAAGAAGAATGCAAAGGTCAAAGAGAGTCAACTTCAAACTCCCCCAGAAACGACGTTGAAGCCGTCTTCGCTGGTTAGTTCTAGCTCAGCGTACCCAGTAAAGAAGGCGGCGGATGTTAAGGATGTGCCTTCGTCAGTGTCGCCTATACTCGCTTCCTCTCTTGGATTGAATAGGATAAAGACGAGATCAGGGCCGTTGCCCCAAGAAAGCTTTTTCGGGTTTAAAAATGACAAGGGACAAGGTCTGGGATCAAGTAATCTTTCGAAGCCTGGTGGCAGTGGAAGCTCCAGTTCTAGCTCTTTGAAAAGTGGGGGAAAGAAGAAGGAAGTGCTAAATCAAAGCAGGATGAGTTCTCAGGAGAATGTTAAACCTTGGATGTATGGTGTAAATAGTTCGGAGAATGTTTCTACTGGAAGTTCGAAATCTAGAGAATTAAGTCCAAATCTACCGGCACACCCACGGCGTCAGAACCGCGAATCATCATCCGAAGCAGGTATTAAAAGTGAATCATGCGGATATTCTGGAGGCTTAAGAAGTTCAGAAGTTTGTACACCTGAGACTGCATATGATTGTGAAAATCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCCATACTTCGTGTTACTAGTGCTCCTAGAAGGAAGTATCCTGCAGATATAAAAAGTTTTTCCCATGAACTAAACTCCAAAGGAGTAAGACCTTTCCCATTTTGGAAGCCGAGAGGCTTGAATAACTTAGAGGAAATATTAGTTGTCATACGGGCAAAATTTGACAAAGCAAAGGAAGAAGTGAACTCTGATCTGGCTATTTTTGCAGCAGATCTGGTTGGTACTCTTGAAAAGAATGCAGATTGTCATCCTGACTGGCAAGAAACAATTGAGGACTTGCTTGTTTTAGCTCGAAGCTGTGCCATGACCTCAGCTGCAGAGTTTTGGCTCCAATGTGAGGGCATTGTTCAGGAGTTGGATGATAGGCGTCAAGAACTCCCTGGAGGTAAGCTGAAGCAGCTTCATACTCGAATGCTTTTCATCCTCACAAGATGCACGAGGTTGTTACAGTTTCACAAGGAGAGTGGGTTGGCTGAGGATGAAAATGTCTTCCAGCTTCGCCCATCTAGAATACTCAATTCTGCGGATAAAAGAGGGCCTTCAGGAATGACAATGGATTTAAAAAGTAGTAGTGCTGTTAAGAGCACAAAAGTACTTTCAGTTAGGAAATCTTACAGTCAGGAGCAACATGGATTAGATTGGAGTCAAGCACATGGGAGTCAAGCACATGATAATCAGACGGGAAATTTTGCGTCACCCTCTGTGGATAATAGTTCAAAGAACTTGGTATCTCCTTCTAGCAGGGACAGGATGGCTTCTTGGAAAAAGCTTCCTTCTCCGGCAGTAAAAGTTAAAGAAGCAGTGCCTACAAAAGATCAGAATGATATCAGGTCAAAACCGACAAAGATGACAAACAATAATAGTGTTGTGTCTGAAGTTGACATGTCTGGTTTTAAGGGTACGGAGGCCCTCCCTGCCAAAGATTTCCATGAACAGACTGTTAAGCACCAACACAAGGCTTCTTGGGGTTACTGGGGTGACCAGCCAACTGTTTTTGACGAAAGTTCAATAATCTGTCGCATTTGTGAGGAGGAGGTTCCTACATCACATGTGGAAGATCATTTAAGAATTTGTGCAATTGTTGATCGATGTGATCAGAAGGGTCTAAGTGTGAATGACCGTCTTATAAGAATTGCTGAAATCCTAGAAAAGATGATGGAGTCCTTTACACAAAAGGATAGCCACCATGTAGAAAGTCCAGATGTTGCAAAAGTGTCAAATTCAAGTGTTACCGAAGAATCTGATGTTCTTTCTCCAAAACTTAGTGATTGGTCCCGTCGAGGTTCAGAGGATATGCTTGACTGTTTCCCTGAAACAGATAATTCTGTCTTTATGGATGACTTAAAGGGTTTGCCTTCGATGACATGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCAGCAGGTAGTATGACTCCGAGGTCTCCAATATTAACTCCAAGAACCAGTCAGATGGATTTGTTCTTGGCCGGAAAGTGTGCTTACTCTGAGCATGATGATCACCCGCAGATGAACGAACTTGCTGATATTGCAAGATGTGTCGCAAATCCTGCTTTGGATGATGAGAACTCCATGCAATATTTACTATCCTGTCTTGAAGACTTGAGGGTAGTCATTGACCGGAGGAAGTTTGATGCACAAACTGTTGAGACCTTTGGCACACGCATTGAGAAGCTGATTCGGGAGAAGTATTTGCAACTTTGTGAGTTGGTTGATGATGAGAAAGTTGACATAACTAGTACTGTTATTGATGAAGATACACCTTTGGAAGATGACGTGGTTCGTAGTTTGAGAACAAGCCCCGTGCATTCTTCTAAAGACCGGACTTCAATTGATGACTTTGAGATTATGAAACCAATTAGCAGAGGGGCCTTTGGTAGGGTGTTTCTGGCCAAAAAGAGAACAACTGGAGATCTCTTTGCAATAAAGCATGTTGATAGGTCTTCCGAGTCTGTAGCCTTTAGCCAGACTTGTGGTCCATTTCTTTTGAACATTCTTGCTGTTTTGAAGAAGGCCGATATGATTCGTAAGAATGCTGTTGAAAGCATATTAGCAGAACGTGATATTTTAATTTCTGTCCGCAACCCATTTGTGGTGCGCTTCTTCTATTCTTTTACATGCCGTGAGAACTTGTATCTTGTCATGGAATACTTGAATGGAGGAGATCTCTACTCATTGTTGAGAAATTTAGGTTGTTTGGATGAAGACGTGGCACGTGTATATATAGCTGAAGTTGTACTCGCATTGGAATATTTGCATTCTCTTCGTGTAGTTCATCGTGATTTGAAGCCCGATAATTTGCTAATTGCACATGATGGTCATATTAAGTTGACAGATTTTGGGCTATCAAAGGTTGGTCTTATCAACAGTACCGATGATTTGTCAGGACCTGCAGTTAGTGAGACATCTCTCCATGTAGAGGACGAACCTTCTGTATCTATGTCTGAAGATCAGAAAGAGAGGAGGAAGAAACGATCCGCTGTGGGAACACCAGACTATTTGGCCCCAGAAATATTATTGGGAACTGGACATGGTTTGTATAACCTCTTTTTTTCTTTATTTAAGGTTGTATTGTGA 3759 43.28 MIRNERKGKGRSKGVGGRMGSETIPRLGEALYLGGNGDLVASKGNKVILPEAEEALPVEPAVYSEETRLKMPPSIVNLRFVPRIGPPAKARSLEHFGSYFKEYSSSGKVEFIISMVFKGRFFSSSRKSDSSSPDGSNSPRFLGSNSPIRSDKKKSKSGTKEDASISDLGASGIGNFGGVGSKDGAKKKNAKVKESQLQTPPETTLKPSSLVSSSSAYPVKKAADVKDVPSSVSPILASSLGLNRIKTRSGPLPQESFFGFKNDKGQGLGSSNLSKPGGSGSSSSSSLKSGGKKKEVLNQSRMSSQENVKPWMYGVNSSENVSTGSSKSRELSPNLPAHPRRQNRESSSEAGIKSESCGYSGGLRSSEVCTPETAYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPFWKPRGLNNLEEILVVIRAKFDKAKEEVNSDLAIFAADLVGTLEKNADCHPDWQETIEDLLVLARSCAMTSAAEFWLQCEGIVQELDDRRQELPGGKLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLRPSRILNSADKRGPSGMTMDLKSSSAVKSTKVLSVRKSYSQEQHGLDWSQAHGSQAHDNQTGNFASPSVDNSSKNLVSPSSRDRMASWKKLPSPAVKVKEAVPTKDQNDIRSKPTKMTNNNSVVSEVDMSGFKGTEALPAKDFHEQTVKHQHKASWGYWGDQPTVFDESSIICRICEEEVPTSHVEDHLRICAIVDRCDQKGLSVNDRLIRIAEILEKMMESFTQKDSHHVESPDVAKVSNSSVTEESDVLSPKLSDWSRRGSEDMLDCFPETDNSVFMDDLKGLPSMTCKTRFGPKSDQGMTTSSAGSMTPRSPILTPRTSQMDLFLAGKCAYSEHDDHPQMNELADIARCVANPALDDENSMQYLLSCLEDLRVVIDRRKFDAQTVETFGTRIEKLIREKYLQLCELVDDEKVDITSTVIDEDTPLEDDVVRSLRTSPVHSSKDRTSIDDFEIMKPISRGAFGRVFLAKKRTTGDLFAIKHVDRSSESVAFSQTCGPFLLNILAVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSETSLHVEDEPSVSMSEDQKERRKKRSAVGTPDYLAPEILLGTGHGLYNLFFSLFKVVL 1252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3208198 3226862 + BLOR05404 Blo13g00123 68518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00123 1252 MobiDBLite consensus disorder prediction 1204 1221 - -
Blo13g00123 1252 Gene3D Transferase(Phosphotransferase) domain 1 1116 1239 - -
Blo13g00123 1252 Gene3D Phosphorylase Kinase; domain 1 943 1051 - -
Blo13g00123 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1151 1163 IPR008271 GO:0004672|GO:0006468
Blo13g00123 1252 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 1060 1240 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 1 20 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 781 800 - -
Blo13g00123 1252 PANTHER SERINE/THREONINE-PROTEIN KINASE 136 1039 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 124 217 - -
Blo13g00123 1252 Coils Coil 429 449 - -
Blo13g00123 1252 SMART serkin_6 1008 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00123 1252 MobiDBLite consensus disorder prediction 606 637 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 124 145 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 1199 1221 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 846 871 - -
Blo13g00123 1252 PANTHER SERINE/THREONINE-PROTEIN KINASE 1060 1240 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 349 364 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 243 364 - -
Blo13g00123 1252 CDD STKc_MAST_like 1014 1239 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 606 673 - -
Blo13g00123 1252 Gene3D Phosphorylase Kinase; domain 1 1062 1115 - -
Blo13g00123 1252 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 136 1039 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 265 332 - -
Blo13g00123 1252 Pfam Protein kinase domain 1009 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00123 1252 MobiDBLite consensus disorder prediction 147 161 - -
Blo13g00123 1252 ProSiteProfiles Protein kinase domain profile. 1008 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00123 1252 SUPERFAMILY Protein kinase-like (PK-like) 993 1239 IPR011009 -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 194 216 - -
Blo13g00123 1252 MobiDBLite consensus disorder prediction 848 871 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00123 Blo-Chr13:3208198 Blo06g00514 Blo-Chr6:27285544 4.37E-45 dispersed
Blo01g01076 Blo-Chr1:37260912 Blo13g00123 Blo-Chr13:3208198 7.99E-06 transposed
Blo06g01092 Blo-Chr6:34219324 Blo13g00123 Blo-Chr13:3208198 0 transposed
Blo15g00621 Blo-Chr15:15674366 Blo13g00123 Blo-Chr13:3208198 2.87E-22 transposed
Blo13g00123 Blo-Chr13:3208198 Blo15g00021 Blo-Chr15:157650 6.79E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84611 PF00069 Pkinase 4.50E-39 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00123 - - rcu:8280394 1522.29