Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00127 ATGCAGAGCTCGGCTTTCAATTTCTCGCCTTCATTGCCTCTGCTGAAGCCTCGAAGGTCTTCGAATCCTATCACGGCCTCTGGTTTCAACATCGTACGCTCTTCTTCCTCTTCGTCTAGCTGCAATGATCTTAGCTCCTTTGATAGAGTATCTCTATCTTCTTCTGCTATTCCGCTCCGATCCTGGTCTTTGTCCTCGTCTTCTTCCTTCTCTCCTAAATTTAGGCCTTGGTCTGGTGCTCCATCACTGCGTAATGACTCAAACTCGAGTCGTTTTGAGGCTAGGGCGACCTCGGTGCCGGAGAGTGCTGGAGAGAGCGCGGAATCCAGTAGTTTGTTCAAGACGCTGGAGTTGGGAGCGTTGTTCGGACTCTGGTACCTCTTCAACATCTACTTCAATATCTACAATAAGCAGGTACTGAAGGTGTATCCATTCCCCGTTACAGTCACTTCAATTCAATTTGCTGTCGGATCTGTGCTTGTTCTTTTTATGTGGAGTTTTAATCTCTATAAGAAGCCAAGAGTTAGTGGCGCACAGCTTGCAGCTTTACTGCCACTGGCAGTTGTTCACACGTTGGGAAACCTTTTCACCAACATGAGTCTCGGTAAAGTGGCTGTCTCATTCACTCACACAATCAAAGCTATGGAGCCTTTCTTCTCTGTCATCCTATCTGCAATGTTTCTCGGGGAGAGGCCTACTCTATGGGTGGTTGCTTCTCTTTTACCAATTGTTGGTGGTGTGGGATTGGCATCGGCCACAGAGGCTTCATTTAACTGGTCTGGATTTTGGAGTGCTATGGCTTCCAATTTGACCAATCAATCCCGAAATGTCCTTAGCAAAAAGTTCATGATAAGAAAAGAGACATTTACGAGCAAATGGCTATCTGCGGAATGTATTTCAATTTTATGTTTAATTTTTTTAATAACCAGCAGTTTTGGTCTACAGGATTCCTTGGACAACATCACTCTCTTTTCGATAATTACAATGATGTCCTTCATTTTGTTAGCTCCCGTTACTCTCTACATGGAAGGTGTTAAGTTCACTCCTGCCTATCTGCAGTCTGCAGGATTGAATGTTAGTCAATTAGCCACTAGGTCTCTTCTTGCAGCCTTGTGTTTCCATGCTTATCAACAGGTGTCTTATATGATATTGCAGAGGGTATCACCTGTCACTCACTCCGTCGGAAATTGTGTGAAGCGGGTGGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCCCTGATCAATTCTCTCGGCACTGGAGTGGCTCTTGCTGGAGTTTTCCTTTATTCAAGGGTGAAACGCATTAAGGCAAACCCGAAGAGCGCATAG 1341 45.26 MQSSAFNFSPSLPLLKPRRSSNPITASGFNIVRSSSSSSSCNDLSSFDRVSLSSSAIPLRSWSLSSSSSFSPKFRPWSGAPSLRNDSNSSRFEARATSVPESAGESAESSSLFKTLELGALFGLWYLFNIYFNIYNKQVLKVYPFPVTVTSIQFAVGSVLVLFMWSFNLYKKPRVSGAQLAALLPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTLWVVASLLPIVGGVGLASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIRKETFTSKWLSAECISILCLIFLITSSFGLQDSLDNITLFSIITMMSFILLAPVTLYMEGVKFTPAYLQSAGLNVSQLATRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSLINSLGTGVALAGVFLYSRVKRIKANPKSA 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3700728 3703768 - BLOR05408 Blo13g00127 68522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00127 446 PANTHER SOLUTE CARRIER FAMILY 35 47 285 - -
Blo13g00127 446 SUPERFAMILY Multidrug resistance efflux transporter EmrE 161 251 - -
Blo13g00127 446 SUPERFAMILY Multidrug resistance efflux transporter EmrE 364 437 - -
Blo13g00127 446 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 315 421 - -
Blo13g00127 446 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 116 444 IPR004696 GO:0016021|GO:0022857|GO:0055085
Blo13g00127 446 PANTHER SOLUTE CARRIER FAMILY 35 315 421 - -
Blo13g00127 446 MobiDBLite consensus disorder prediction 63 89 - -
Blo13g00127 446 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 47 285 - -
Blo13g00127 446 MobiDBLite consensus disorder prediction 1 23 - -
Blo13g00127 446 Pfam Triose-phosphate Transporter family 117 308 IPR004853 -
Blo13g00127 446 Pfam Triose-phosphate Transporter family 316 434 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00127 Blo-Chr13:3700728 Blo14g00408 Blo-Chr14:4505368 5.69E-58 dispersed
Blo11g00659 Blo-Chr11:7046379 Blo13g00127 Blo-Chr13:3700728 6.87E-139 transposed
Blo16g00227 Blo-Chr16:5094729 Blo13g00127 Blo-Chr13:3700728 0 transposed
Blo13g00127 Blo-Chr13:3700728 Blo15g00265 Blo-Chr15:2848875 2.53E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00127 K15283 - csv:101203848 562.762