Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo13g00135 | ATGGCTTCATCAAGCTCATACAATTCACCATGTGCGGCCTGCAAGTTCTTGAGGAGAAAGTGTATGCCTGGCTGCATATTTGCGCCATATTTCCCCCCAGAGGAGCCTCAGAAGTTTGCCAACGTCCACAAGATATTTGGAGCCAGCAATGTTACCAAGCTCCTCAACGAACTCCTCCCCCACCAACGCGAAGATGCCGTCAATTCCCTTGCCTACGAGGCCGAGGCTCGAGTCCGAGACCCCGTCTACGGCTGTGTTGGAGCCATCTCCTTCCTCCAACGCCAAGTCCAACGGCTTCAAAAAGAGCTCGATGCCGCCAATGCAAACCTCATCCGCTATGCTAGCTCCGAAATCCCTTCCTCCATCTCCGCATCGTCCGGGGTAAGTGTGTTTGGTAGGAGAGATGGACATGGCGGAGGAGGAGGAGGGTATTATCAGCCTCCTCTTTTCCCTATGCCCTTTCCCCTACCTTGGAATGATGATGCGGACATCCATAGAGGGGGAGGAGGAGGAGCAGGTCAAGGAAGCATGTGA | 534 | 54.12 | MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANANLIRYASSEIPSSISASSGVSVFGRRDGHGGGGGGYYQPPLFPMPFPLPWNDDADIHRGGGGGAGQGSM | 177 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 4292002 | 4292535 | - | BLOR05416 | Blo13g00135 | 68530 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo13g00135 | 177 | PANTHER | ELONGATED PETIOLULE 1 | 1 | 172 | - | - | |
Blo13g00135 | 177 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 172 | - | - | |
Blo13g00135 | 177 | Coils | Coil | 89 | 116 | - | - | |
Blo13g00135 | 177 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 107 | IPR004883 | - | |
Blo13g00135 | 177 | ProSiteProfiles | LOB domain profile. | 9 | 110 | IPR004883 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo13g00135 | Blo15g00256 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00218 | Blo-Chr4:1690897 | Blo13g00135 | Blo-Chr13:4292002 | 4.12E-48 | dispersed | |
Blo13g00135 | Blo-Chr13:4292002 | Blo16g00219 | Blo-Chr16:4932956 | 3.65E-84 | dispersed | |
Blo07g00773 | Blo-Chr7:24973447 | Blo13g00135 | Blo-Chr13:4292002 | 2.25E-27 | transposed | |
Blo13g00135 | Blo-Chr13:4292002 | Blo15g00256 | Blo-Chr15:2697547 | 2.00E-90 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13117 | PF03195 | LOB | 2.50E-42 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo13g00135 | - | - | tcc:18604002 | 247.669 |