Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00135 ATGGCTTCATCAAGCTCATACAATTCACCATGTGCGGCCTGCAAGTTCTTGAGGAGAAAGTGTATGCCTGGCTGCATATTTGCGCCATATTTCCCCCCAGAGGAGCCTCAGAAGTTTGCCAACGTCCACAAGATATTTGGAGCCAGCAATGTTACCAAGCTCCTCAACGAACTCCTCCCCCACCAACGCGAAGATGCCGTCAATTCCCTTGCCTACGAGGCCGAGGCTCGAGTCCGAGACCCCGTCTACGGCTGTGTTGGAGCCATCTCCTTCCTCCAACGCCAAGTCCAACGGCTTCAAAAAGAGCTCGATGCCGCCAATGCAAACCTCATCCGCTATGCTAGCTCCGAAATCCCTTCCTCCATCTCCGCATCGTCCGGGGTAAGTGTGTTTGGTAGGAGAGATGGACATGGCGGAGGAGGAGGAGGGTATTATCAGCCTCCTCTTTTCCCTATGCCCTTTCCCCTACCTTGGAATGATGATGCGGACATCCATAGAGGGGGAGGAGGAGGAGCAGGTCAAGGAAGCATGTGA 534 54.12 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANANLIRYASSEIPSSISASSGVSVFGRRDGHGGGGGGYYQPPLFPMPFPLPWNDDADIHRGGGGGAGQGSM 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4292002 4292535 - BLOR05416 Blo13g00135 68530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00135 177 PANTHER ELONGATED PETIOLULE 1 1 172 - -
Blo13g00135 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 172 - -
Blo13g00135 177 Coils Coil 89 116 - -
Blo13g00135 177 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Blo13g00135 177 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00135 Blo15g00256 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00218 Blo-Chr4:1690897 Blo13g00135 Blo-Chr13:4292002 4.12E-48 dispersed
Blo13g00135 Blo-Chr13:4292002 Blo16g00219 Blo-Chr16:4932956 3.65E-84 dispersed
Blo07g00773 Blo-Chr7:24973447 Blo13g00135 Blo-Chr13:4292002 2.25E-27 transposed
Blo13g00135 Blo-Chr13:4292002 Blo15g00256 Blo-Chr15:2697547 2.00E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13117 PF03195 LOB 2.50E-42 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00135 - - tcc:18604002 247.669