Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00153 ATGCAATCCTGGGCGTCAATCCAGAGGAAGGACGTCCCTCGCTCGATCCAATGGCCAGGGAAGGACATCTGTCCGTCCCCTCTAGAAGCCTCTAGATTCAATCCTGGCCATCGATACAGACAAGGGACGTCCCTCGCTCAATCCAACAGCCAAGGATATGCGTCCATCATTTCGTTGTCCGTTTGTCCATGTATCATGGTCGTACCATGCGCGATCCAACGACCAGCTATCCATCGTCCGCCATCGTCCATCTTCTTTGATCTGTCAGGACGGAAGGAACTTGACGTCCTTCGTCTCCGTTCGACGGTACTTGACAGAGACGAAATCGAGGTGTTAAACTCGACGAATACTAAACGGAAGTTAGAAGGATCTAGTTGCAGATCCGCCGTACCCCCTGGTCCTAAACGGCTACCTCTGATCGGAAACCTCCACCAGCTCACCCACCCTCCTCATATATCTCTGCAAACCCTCTGTAAGAAATATGGTCCTCTCATGTTTTTGCAGCTCGGATCAGTTCCCACCATTGTCATCTCCTCCGCTGACATGGCGAGAGAGGTTTTCAAGGGCCACGACCTCGCTTTCTCCGGTCGACCGTCTCTTTATTCGTCTAAGAAAATCAGTTACAACTGCTCCACCGTTTCATTGGCTCCTTATGGAGATTACTGGAGAGAAATCAGAAAGATTATGATGTTGGAGTTGCTTAGTGCCAAGATGGTTAAGTCTTATCAGTCCGTGAGAGAAGAAGAAGTTGGGATGCTGATCGATGCCATAGCCTCTTCGTCATCAAGCTCGGGTGTTAACATAAGTGAATTGACATTTTCTTTAGCAAACAACATAGTCTGTACAGTTGCTTTTGGGAAAAGAGAAGGAGGAGGAGTTAATGGGGAGAAGAGTAGATTTCATGAGCTTCTTCAAGAAACGCAGAATTTATTAGGAGGCTTCTGCATTGCTGATTTCTTCCCATGGCTGCAGTGGGTGAACAGGTTTAATGGCGTAAAAGCTAGTCTTGACAAGTGTTTCGGAGAGTTGGATAGCTTTTATGACAGAGTTATTGAAGAACACAGAGACGGTAGTCGCCACAGATCGGAGATTGAGGATATTGTTGATGTTTTGCTTCGTGTTCAGAAGGATCCTGATCAACCCATCGCTCTCACCAATGAACAAATCAAAGCTGTTCTCACAGATATTTTCATTGCAGGAACAGATACATCATCAGCTACACTAACATGGATAATGGCTGAGCTGATGAGGAACCCGTCTGTAATGGAAAAGGCACAGAGAGAGGTTAGAGAAGCCATGAAAGGGAAAGACAAGGTCGAAGAAGAAGACATCTCCAATCTAATTTACCTAAAATTAGTGATAAAGGAGGGACTTAGACTCCACCCACCGGCTCCATTGTTAGTACCACGAGAAACCATAGAAAACAGCAGAATTCAATCCTACAACATTCCGGCGGGAACACGGGTATTCGTTGATGCAAAATCGATAGCGTTGGACCAAAAGTATTGGGAAAATCCGAACGAGTTTATGCCGGAGAGATTTTCCGGTAGCTCTGTCGACTACAAGGGACAACACTATGAGTTTATTCCGTTTGGGGTGGGAAGGAGGAGCTGTCCTGGTCTGAACTTTGGGGTACAAGTTATTGAGATTGCTTTGGCAAACCTTCTGCTGTGTTTTGATTGGGAGTTGGTTGATGGAGAAGAGTTGGACATGGATGAAGCTTTTGGGATTACAATGCACAAGAGAGTTCCACTCCGCCTCTCTGCCAAAGCGCTTAACCTACGTGGCTGA 1791 46.57 MQSWASIQRKDVPRSIQWPGKDICPSPLEASRFNPGHRYRQGTSLAQSNSQGYASIISLSVCPCIMVVPCAIQRPAIHRPPSSIFFDLSGRKELDVLRLRSTVLDRDEIEVLNSTNTKRKLEGSSCRSAVPPGPKRLPLIGNLHQLTHPPHISLQTLCKKYGPLMFLQLGSVPTIVISSADMAREVFKGHDLAFSGRPSLYSSKKISYNCSTVSLAPYGDYWREIRKIMMLELLSAKMVKSYQSVREEEVGMLIDAIASSSSSSGVNISELTFSLANNIVCTVAFGKREGGGVNGEKSRFHELLQETQNLLGGFCIADFFPWLQWVNRFNGVKASLDKCFGELDSFYDRVIEEHRDGSRHRSEIEDIVDVLLRVQKDPDQPIALTNEQIKAVLTDIFIAGTDTSSATLTWIMAELMRNPSVMEKAQREVREAMKGKDKVEEEDISNLIYLKLVIKEGLRLHPPAPLLVPRETIENSRIQSYNIPAGTRVFVDAKSIALDQKYWENPNEFMPERFSGSSVDYKGQHYEFIPFGVGRRSCPGLNFGVQVIEIALANLLLCFDWELVDGEELDMDEAFGITMHKRVPLRLSAKALNLRG 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5117729 5120250 + BLOR05434 Blo13g00153 68548

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00153 596 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 531 540 IPR017972 GO:0005506|GO:0016705
Blo13g00153 596 PRINTS P450 superfamily signature 529 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS P450 superfamily signature 399 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 Gene3D Cytochrome P450 123 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PANTHER OS08G0105600 PROTEIN 122 592 - -
Blo13g00153 596 Coils Coil 422 442 - -
Blo13g00153 596 PANTHER CYTOCHROME P450 71A9 122 592 - -
Blo13g00153 596 SUPERFAMILY Cytochrome P450 131 589 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 Pfam Cytochrome P450 131 581 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 388 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 451 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 492 516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 182 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 275 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 158 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 538 561 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 528 538 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00153 596 PRINTS E-class P450 group I signature 408 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00153 K20617 CYP71A; cytochrome P450 family 71 subfamily A - qsu:111987052 615.15
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo13g00153 Blo15g00247 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00840 Blo-Chr6:31647847 Blo13g00153 Blo-Chr13:5117729 4.05E-136 dispersed
Blo06g00842 Blo-Chr6:31660584 Blo13g00153 Blo-Chr13:5117729 8.37E-144 dispersed
Blo07g00381 Blo-Chr7:6491349 Blo13g00153 Blo-Chr13:5117729 4.60E-117 dispersed
Blo13g00153 Blo-Chr13:5117729 Blo15g00247 Blo-Chr15:2578273 1.11E-133 dispersed
Blo13g00153 Blo-Chr13:5117729 Blo13g00154 Blo-Chr13:5140384 0 tandem
Blo13g00153 Blo-Chr13:5117729 Blo15g00245 Blo-Chr15:2546948 1.59E-20 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g851 . . . Bda15g00535 . . . . Cmo13g00794 Cmo18g00165 . . . . . . . Bhi02g00597 . . . . . . Cla06g01705 . . . . . . . . . . Lsi02g00426 Csa01g00905 Chy12g01223 Cme12g01649 Blo13g00153 Blo15g00247 . . Bpe07g00863 . . . . Cmo10g00092 . Cma13g00766 . . . . . . . . . . . . Cla03g00297 . . . . . . . . Chy02g02614 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000114 2 12 3 1 0 7 0 7 6 6 11 9 15 7 3 22 9 4 0 10 11 2 0 8 13 10 6 17 8 7 216
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00153 Blo_Chr13 FPKM 9.04047 9.533813 1.721456 1.581226 0.355376 0.781358 0.433137 0.277499 0.474019 0.270034