Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00154 ATGACGAAGAATACTAAACGGAAGTTAGAAGGATCTAGTTGCAGATCCGCCGTACCCCCTGGTCCTAAACGGCTACCTCGGATCGGAAACCTCCACCAGCTCACCCACCCGCCTCATATATCTCTACAAACCCTCTCTAAGAAATATGGTCCTCTCATGTTTTTGCAGCTCGGATCAGTTCCCACCATCGTCATCTCCTCTGCTGACATGGCGAGAGAGATTTTCAAGGGCCACGACCTCGCTTTCTCCGATTACTGGAGAGAAATCAGAAAGATTATGATGTTGGAGTTGCTTAGTGCCAAGATGGTTAAGTCTTATCAGTACGCGAGAGAAGAAGAAGTTGGGATGCTGATCGACGCCATAGCCTCTTCGTCATCAAGCTCGGGTGTTAACATAAGTGAATTGACATTTTCCTTGGCAAACAACATAGTCTGTACAGTTGCTTTTGGGAAAAGAGAAGGAGGAGGAGTTAATGGGGAGAAGAGTAGATTTCATGTGCTTCTTCAAGAAACGCTGAATTTATTAGGAGGCTTCTGCATTGCTGATTTCTTCCCATGGCTGCAGTGGGTGAACAGGTTTAATGGCGTAAAAGCTAGTCTTGACAAGTGTTTCGGAAAGTTGGATAGCTTTTATGACAGAGTTATCGAAGAACACAGAGACGATAGTCGCCACAGATCGGAGATTGAGGATATTGTTGATTTTTTGAAGGAAATTTCAGTCTTTTCACTCGTCCAATCATTGGTTGGATTGCGGGATATTTACATTGCAGGAACAGATACATCATCAGCTACACTAACATGGATAATGGCTGAGCTGATGAGGAACCCGTCTGTAATGGAAAAGGCACAGAGAGAGGTTAGAGAAGCCATGAAAGGGAAAGACAAGGTCGAAGAAGAAGACATCTCCAATCTAATTTACCTAAAATTAGTGATAAAGGAGGGACTTAGACTCCACCCACCGGCTCCATTGTTAGTACCACGAGAAACCATAGAAAACAGCAGAATTCAATCCTACAACATTCCGGCGGGAACACGGGTATTCGTTGATGCAAAATCGATAGCATTGGACCCAAAGTATTGGGAAAACCCGAATGAGTTTAAGCCGGAGAGATTTTCAGGTAGCTCTTTTATTCCGTTTGGGGTGGGGAGGAGGAGCTGTCCTGGTCTGGACTTTGGGGTACAAGTTATTGAGATTGCTTTGGCAAACCTTCTGCTGTGCTTTGATTGGGAGTTGGTTGACGGAGAAGAGTTGGACATGGATGAAGCTTTTGGGATTACAATGCACAAGAGAGTTCCTCTCCGCCTCTCTGCCAAAGCTCTTAACCTACGTGGCTGA 1335 45.09 MTKNTKRKLEGSSCRSAVPPGPKRLPRIGNLHQLTHPPHISLQTLSKKYGPLMFLQLGSVPTIVISSADMAREIFKGHDLAFSDYWREIRKIMMLELLSAKMVKSYQYAREEEVGMLIDAIASSSSSSGVNISELTFSLANNIVCTVAFGKREGGGVNGEKSRFHVLLQETLNLLGGFCIADFFPWLQWVNRFNGVKASLDKCFGKLDSFYDRVIEEHRDDSRHRSEIEDIVDFLKEISVFSLVQSLVGLRDIYIAGTDTSSATLTWIMAELMRNPSVMEKAQREVREAMKGKDKVEEEDISNLIYLKLVIKEGLRLHPPAPLLVPRETIENSRIQSYNIPAGTRVFVDAKSIALDPKYWENPNEFKPERFSGSSFIPFGVGRRSCPGLDFGVQVIEIALANLLLCFDWELVDGEELDMDEAFGITMHKRVPLRLSAKALNLRG 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5140384 5142109 + BLOR05435 Blo13g00154 68549

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00154 444 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 379 388 IPR017972 GO:0005506|GO:0016705
Blo13g00154 444 Gene3D Cytochrome P450 11 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PANTHER CYTOCHROME P450 71A9 13 83 - -
Blo13g00154 444 PANTHER CYTOCHROME P450 71A9 82 440 - -
Blo13g00154 444 Coils Coil 279 299 - -
Blo13g00154 444 PRINTS E-class P450 group I signature 376 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PRINTS E-class P450 group I signature 386 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PRINTS E-class P450 group I signature 265 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PRINTS E-class P450 group I signature 245 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 Pfam Cytochrome P450 75 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 Pfam Cytochrome P450 19 85 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 SUPERFAMILY Cytochrome P450 19 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PANTHER OS08G0105600 PROTEIN 13 83 - -
Blo13g00154 444 PANTHER OS08G0105600 PROTEIN 82 440 - -
Blo13g00154 444 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PRINTS P450 superfamily signature 377 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 PRINTS P450 superfamily signature 256 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00154 444 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00154 K20617 CYP71A; cytochrome P450 family 71 subfamily A - vvi:100248387 500.745
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo13g00154 Blo15g00245 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00154 Blo-Chr13:5140384 Blo15g00245 Blo-Chr15:2546948 7.01E-16 dispersed
Blo13g00153 Blo-Chr13:5117729 Blo13g00154 Blo-Chr13:5140384 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g861 . . Bda06g00623 Bda15g00532 . . . Bma12g01061 . Cmo18g00175 . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0183 . Lsi02g00436 Csa01g00909 Chy12g01217 Cme12g01643 Blo13g00154 Blo15g00245 . . . . . . . . . . . . . . . Bhi08g01683 . . . Hepe07g2179 . . Cla03g00302 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00154 Blo_Chr13 FPKM 129.262207 133.481354 10.004535 8.137698 3.608568 2.404276 3.453611 0.0 0.115147 0.0