Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00157 ATGGGCGGAGTTACTTCTTCAATGGCGGCGAAATTCGCCTTTTTCCCCCCCAACCCACCTTCGTACAAAGTTGTGAAAGACGAAGCAACTGGTTTATTGTTGTTGGACCCGATTTTGCACCGGGAAAACGTCGACGTCTTGAAGATTCCCACTCGCCGGGGGACCCAGATCGTGGCCGTGTATGTCCGGTATCCGATGGCGACATCTACCATTCTCTATTCCCATGGTAATGCTGCTGATATTGGCCAGATGTACGAGCTTTTCCTTGAACTCAGCATTCACTTGCAGGTCAATTTAATGGGGTATATCTTCCACCATTCTTTACTCCTTTTTCCCCCAAATATTTTGGACCTTTTGGAGAATAGAATTGCCACCTATGCAGAATTTGTTAGTGACAGTTATTCATCATTCTTTCCTTTTCTGGGTACGGATATGTACAGGTATGATTACTCTGGCTACGGGCAGTCAACTGGAAAGCTAAAACTAAGTTTATTGCCAAGCGAGCAAAATACTTATGCAGACATCGAAGCAGCCTATAGGTGTCTTGAAGACAACTACGGAGTGAAGCAGGAGGATATAATTCTATATGGCCAATCAGTCGGAAGTGGCCCCACTTTAGACTTAGCGGCAAGATTGCCACGATTAAGAGCAGTGGTTTTGCATAGTCCTATATTGTCGGGGTTACGAGTCATGTACCCAGTGAAGCGCACCTACTGGTTTGACATCTATAAGAATATCGACAAAATCTCGATGGTGAAGTGCCCCGTTTTGGTAATTCATGGAACTTCCGATGAAGTTGTCGACTTCTCTCACGGCAAACAGCTATGGGAACTATGTCAAGAGAAGTATGAACCATTATGGCTCGAAGGGGGAAACCATTGTGATTTGGAACTTTTCCCAGACTATATAAAGCATCTCAAGAAATTTGTTTCGTCAGTACAGAACTCGCCTTCCCAAAGAAACAATTTGAGGAGAAGCGTGGATAGAGCTGACCAATCCCGAAAGAGCACAGATGGCTTTGAGGCTCCAAGGAAGAGCGTCGACAAGAGAGAGAAACCTAGGAAGAGCATGGATAAATTCGAAAAACTAAGATTGCATGGATACAAGTTGAACCACATTGAAGAGGTAGACAAGTCTAGAATTTTGTACAACCAAAAGGAGAGATCGAGAAGAAGCGTGGACTACCATGAAAAACCTCGGAGAAGCATCGATCAACAGCTGGAAAAAGGACGGAAAAGTGTGGACTGGTTGGACAGAATTCTGGCCGGATGA 1272 44.73 MGGVTSSMAAKFAFFPPNPPSYKVVKDEATGLLLLDPILHRENVDVLKIPTRRGTQIVAVYVRYPMATSTILYSHGNAADIGQMYELFLELSIHLQVNLMGYIFHHSLLLFPPNILDLLENRIATYAEFVSDSYSSFFPFLGTDMYRYDYSGYGQSTGKLKLSLLPSEQNTYADIEAAYRCLEDNYGVKQEDIILYGQSVGSGPTLDLAARLPRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDKISMVKCPVLVIHGTSDEVVDFSHGKQLWELCQEKYEPLWLEGGNHCDLELFPDYIKHLKKFVSSVQNSPSQRNNLRRSVDRADQSRKSTDGFEAPRKSVDKREKPRKSMDKFEKLRLHGYKLNHIEEVDKSRILYNQKERSRRSVDYHEKPRRSIDQQLEKGRKSVDWLDRILAG 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5268760 5271780 + BLOR05438 Blo13g00157 68552

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00157 423 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 1 104 - -
Blo13g00157 423 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 144 369 - -
Blo13g00157 423 MobiDBLite consensus disorder prediction 387 406 - -
Blo13g00157 423 MobiDBLite consensus disorder prediction 324 358 - -
Blo13g00157 423 MobiDBLite consensus disorder prediction 314 358 - -
Blo13g00157 423 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 1 104 - -
Blo13g00157 423 Pfam Serine aminopeptidase, S33 142 226 IPR022742 -
Blo13g00157 423 SUPERFAMILY alpha/beta-Hydrolases 142 311 IPR029058 -
Blo13g00157 423 Gene3D alpha/beta hydrolase 120 312 IPR029058 -
Blo13g00157 423 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 144 369 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00157 K01076 ABHD17; abhydrolase domain-containing protein 17 [EC:3.1.2.22] - csv:101220027 598.201
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00427 Blo-Chr10:7629628 Blo13g00157 Blo-Chr13:5268760 0 dispersed
Blo13g00157 Blo-Chr13:5268760 Blo18g00419 Blo-Chr18:4553183 3.57E-159 dispersed
Blo13g00157 Blo-Chr13:5268760 Blo08g00531 Blo-Chr8:15256883 6.35E-118 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g872 . . . . Bpe12g00679 . . Bma12g01282 . . Cma10g00080 Cma11g00058 Car10g00071 Car11g00052 Sed08g0062 . . Bhi02g00575 Tan09g2328 Cmetu02g1969 . Hepe09g0082 . . . . . . . . . . Cone16ag0060 . . . . . . Blo13g00157 . . . Bpe07g01087 . . . . Cmo10g00080 Cmo11g00060 . . . . . Cpe18g00881 . . . . . . . . . . . . . . . Csa01g00088 Chy02g02632 Cme02g02031
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000437 3 6 3 3 4 4 5 4 4 4 3 4 5 4 4 4 4 6 3 4 4 4 4 4 4 2 4 6 4 4 121
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00157 Blo_Chr13 FPKM 89.367622 89.918526 44.472576 45.322144 130.839203 97.35849 123.823174 20.545654 23.042992 22.626968