Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00162 ATGATAATTGAAGAACACGAAGAAGAATCTTTCAACACGAAAGAAGGAGAGCGGCAAAGCGATTTCATAGACATGTTGCTATCGTCGATGCATAAACAGCCCATGGATCCTAAAGAGGATCATCCTTTTACGATGCGTCGAGAAAACATCAAAGCCATAGTCTTGGACATGATCTCAGCTGCATTCGACACTTCTTCAACCTCCATTGATTGGACCTTCTCGGAGCTTCTCCGACATCGGAGGGTGATGAAACTTGCTCAACAAGAGCTTCAGAATGTCGTCGGAACGAACCGGATGGTGGAGGAAACAGACTTGCCGAAACTTCATTACTTAGACATGGTGGTAAATGAGGCTTTCCGTTTACACCCGGTGGCTCCTCTTCTCGTTCCTCGGGAATCCATTGGGGATACTACCGTCAATGGCTTTTTTATCCCCAAGAAAACTAGGCTTTTCGTCAATACTTGGGCAATCGGGAGAGACCCAAATGTTTGGTCGGAAAATGTTCTACTGTTTTACCCAGAGAGATTTGCGAGCAGCTCCGAGCTTAGGAGAGACTTCAAGCTGATCCCGTTTGGATATGGCCGGAGAGAGTGCCCCGGAGCTCAAGTAGGATTGATCACGGTGAAGCTTGTTCTTGCTCACTTGTTGCACTGCTTTGACTGGAATCTTGGCCATGGTCTTCTTCCTGAAGACCTCGACATGACTGAAGTTTTCGGCCTTGCAATGACCAGAGCCAAGCCGTTGCTTGTGCTCCCAACCTATCGTCTCACCTGTTAG 777 47.62 MIIEEHEEESFNTKEGERQSDFIDMLLSSMHKQPMDPKEDHPFTMRRENIKAIVLDMISAAFDTSSTSIDWTFSELLRHRRVMKLAQQELQNVVGTNRMVEETDLPKLHYLDMVVNEAFRLHPVAPLLVPRESIGDTTVNGFFIPKKTRLFVNTWAIGRDPNVWSENVLLFYPERFASSSELRRDFKLIPFGYGRRECPGAQVGLITVKLVLAHLLHCFDWNLGHGLLPEDLDMTEVFGLAMTRAKPLLVLPTYRLTC 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5616985 5617761 + BLOR05443 Blo13g00162 68557

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00162 258 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 191 200 IPR017972 GO:0005506|GO:0016705
Blo13g00162 258 PRINTS P450 superfamily signature 60 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS P450 superfamily signature 113 124 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS P450 superfamily signature 189 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS P450 superfamily signature 198 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 SUPERFAMILY Cytochrome P450 3 255 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS E-class P450 group I signature 69 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS E-class P450 group I signature 49 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS E-class P450 group I signature 188 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PRINTS E-class P450 group I signature 198 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 255 - -
Blo13g00162 258 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 255 - -
Blo13g00162 258 Gene3D Cytochrome P450 1 251 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo13g00162 258 Pfam Cytochrome P450 2 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00162 - - - zju:107418843 322.013
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00162 Blo-Chr13:5616985 Blo13g00536 Blo-Chr13:27193186 6.12E-64 dispersed
Blo13g00162 Blo-Chr13:5616985 Blo15g00331 Blo-Chr15:3939889 9.49E-64 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g341 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo13g00162 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa01g00284 . .
Vvi17g856 . . . . . . . . . Cmo18g00169 . Cma11g00063 . . . . . Bhi02g00595 . . . . . . . . . . . . . . . . Cone19ag0174 Lsi02g00430 Csa01g00908 Chy12g01221 Cme12g01644 Blo13g00162 . . . . . . . . . Cmo11g00066 . . . . . . Bhi08g01677 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000178 4 7 3 4 2 4 0 6 3 8 4 3 4 9 9 8 4 6 2 6 11 7 2 9 10 11 15 7 7 6 181
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00162 Blo_Chr13 FPKM 246.312286 276.94455 329.489166 328.852356 153.551086 141.396637 156.688461 453.836517 468.858032 484.865906