Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00170 ATGGCGGCTCCTTTTACGGGATTGCAACACAGAGACGGAGGTGGAGTTGCGGTGCTGTCGAATTCGGTGAATAAGGTGGATGCGTCTTCGTCTCCCTCCTCGTCGAATGGTTGTTTGAGGAGCTCCGAGCCTAACTCTCCTATTCTGATTTTTTTGTTCTTCCACAAAGCTATTCGTTATGAGCTTGATGCGCTTCACAGGTTCGCTATGGCCCTCGCCACCGGCCAGCGAACCGATATTCAGCCTCTTGTCAAGCGATACCATTTTCTCAGATCAATTTATAAACATCACTCCAATGCTGAAGACGAGGTAATTTTTCCAGCACTTGACATTCGTGTGAAGAATGTAGCTCAAACATACTCTCTCGAGCACAAAGGAGAAAGCAATCTTTTTGATCATCTTTTTGAGCTTCTCAATTCTAGCACACAAGATGCTGAATGCTTCCCAAGGGAGTTAGCATCGTGTACCGGAGCATTGAGGACAGCAGTTAGCCAACATATGGCCAAGGAAGAAGAGCAGGTCTTTCCCTTGCTCATGGAGAAGTTCTCTCTTGATGAGCAAGCATCTCTGGTCTGGCAATTCTTGTGCAGTATTCCTGTGAATATGATGGCTGAATTTCTTCCTTGGCTATCATCATCTATTTCACCAGATGAATGTCAGGATCTACGGAAGTGTTTGAGCAAAATAGTTCCCAAGGAAAAGCTTCTTCAACAGGTCATATTTACATGGATGGAAGGGACAACTGGCACGAGCAACGTTGAAAATTGTGTCGATGATTCTTTGGGTCAATGTTGTTCTGATCCTAGCATTTGCGCATCATCCCAGAAAACAGAGATGGTTAAAAAAACTTGTGACATGATGAGTACTGGAAAAAGGAAACATTTAGAGTTTAGTGCTGATATAACCAATGTCATGGAGGCACATCCAATTAATGACATATTACTTTGGCATAACGCTATTAAAAAGGAGTTAAATGAGATAGCTGAAGAGGCTAGAAACATACAACTTTCTGGAAACTTTGATAATCTTTCAGCCTTTAATGAGAGACTGCATTTCATTGCTGAAGTTTGCATCTTTCATAGTATTGCTGAAGACAAGGTTATCTTTCCCGCAGTAGATGGAGAGTTATCCTTTCTCCAGGAACATGCTGAAGAAGAAAGTCAATTTAACGAGTTCAGGAGCTTGATTGAAAGTATCCAAAGTGATGGAGAAATTTCTAGTTCGTCTGCTGAATTTTATGAGAAGTTGTGCTCACATGCTGATCAAATCATGGATACAATTCAGAGACATTTTAATAATGAGGAACTTCAGGTTCTTCCACTAGCTCGAAAGCACTTTAGCCTCAAAAGACAGCGGGAAATCTTATATCATAGCTTGTGCATGATGCCCTTGAAGTTAATTGAGCGAGTCTTGCCATGGTTGGTAGGGTCATCGTCTGAAGATGAAGCTGAAAATTTCCTGAAAAACATCCAATTGGCAGCTCCAACATCAGACACTGCTTTAGTGACACTCTTTTCTGGTTGGGCTTGCAAGGCTCGTAACCGGGGTTTATGCTTGTCTTCAAGAGTGACTGGTAGCTGTCCAGTAAAGAGGTTCATTGAAATTGAAGAAACTTTTGTCCCATCATTCTGTTCTTGTGCCTCTGTGGTATCTGCAAGAGAGACTGCATCATCAACTAACAGTGGAAGACCAGAAAGACCAGCAAAACGAAATGTCTCAGTTTCGTGTAAAAGTTGTGTTTCCTCTAGCTTCTCAGAGGCTGCTAATTTGCAGCAGTCTTGCTGTAGTGATGAGTCTTGTTGTGTCCCAGGCTTAGGAGTCAATAGCAATAATCTGGGGTTGAGTTCTCTTTTTACAACAAAGTCTTTGTGTTCCTTATCTCCCATCTCTGGTGCCCCTTCTCTCAATTCGAGCCTTTTCTCATGGGAAACAGATATTAGCTTTTCAGATATCGGGCCTTCAGGTCGGCCAATTGATACTATTTTTAAGTTTCATAAAGCTATAAGAAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAATCAATGTGATGAGACATCCCTAAGGCAATTTATTGGTAGATTTCGCCTGCTATGGGGATTGTATCGAGCTCATAGTAATGCTGAAGATGATATAGTGTTTCCTGCTCTAGAGTCTAAAGAGGCATTGCATAATGTCAGTCACTCTTACACGCTGGACCATAAACAGGAGGAAAGGTTATTTGAAGACATTTCAAGTGTTCTTTTGGACCTTTCTCATCTCCATGTAAACTCCGCGTTGGACGATGATTTGCCCACAAATAGCTATAACTCTATGGGAAAAAAGTATGTTGAGCTAGCTACGAAGCTTCAAGGAATGTGCAAATCTATTAGAGTGACTTTAGATCAGCATATCTTCAGGGAAGAACTCGAACTATGGCCATTGTTTGGAAAACATTTCTCTGTGGAGGAGCAAGATAAAATAGTTGGACGCATCATTGGAACAACGGGTGCAGAAGTTCTCCAATCAATGTTGCCATGGGTAACTTCAGCATTGACGCAGGATGAACAGAATATAATGATGGATACATGGAAGCAAGCCACAAAAAACACAATGTTCAATGAGTGGCTCAATGAATGTTGGAAAGGACCTGAGGCATCAACTATACGTACGGGAACATTGGAATCTGATACTACTCAAAAAGCAAGCGTGAATCAGTGCGATCAGTTGTTCAAGCCTGGTTGGAAGGATATTTTCCGAATGAATCAAAATGAGATTGAATCAGAGATAAGAAAGGTCTACCAGGATTTGACTCTTGATCCAAGAAGAAAGGCATATCTGGTGCAGAATCTTATGACTAGTCGCTGGATTGCCGCCCAACAGAAATTACCAGAAGTCACGGCGGGAAGTTCTAATAGTGAAGATGTAGTGGGACGTTCACCGTCGTATAGTGACCCAGAAAAAAGTAAATTTGGGTGTGAACATTACAAAAGAAACTGCAAACTCCTTGCTGCTTGCTGTGGCAAGTTGTTTACTTGTCGGTTTTGTCACGATAATGTTAGCGACCACTCTATGGATAGGAAAGCAACCTCTGAGATGATGTGCATGCGCTGTATGACAATTCAGGCAGTCGGGCGTACATGTTCAACTCCTTCATGCAATGAATTCTCAATGGCAAAGTACTATTGCAATATATGCAAATTTTTTGACGATGAAAGAACTGTATATCACTGCCCATTTTGCAACTTGTGTCGTCTGGGGAAAGGTCTTGGACTTGACTATTTTCACTTGCAACAGTCAGAGCGCTACCCTGTGGTCATTACATGCATTCAGCTTGCTTTCAGGCATATACTTGTAGCCATTACACCTGTCCTATTTGCAGCAAATCGTTGGGAGACATGGCGGTTTATTTTGGCATGCTTGACGCTCTGTTGGCTGCTGAAGAGCTCCCAGACGAGTACAGAGGTCGTTGTCAGGATATATTATGCAATGACTGTGATAGGAAGGGGATGTCACGATTTCACTGGCTATATCACAAGTGTGGATCTTGTGGTTCATACAACACCCGAGTCATCAAGAGTGAGACTACAAATGCAGATTGCTCGGAATCAAATCGATGAAAGGTTTTACTAA 3618 42.01 MAAPFTGLQHRDGGGVAVLSNSVNKVDASSSPSSSNGCLRSSEPNSPILIFLFFHKAIRYELDALHRFAMALATGQRTDIQPLVKRYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSTQDAECFPRELASCTGALRTAVSQHMAKEEEQVFPLLMEKFSLDEQASLVWQFLCSIPVNMMAEFLPWLSSSISPDECQDLRKCLSKIVPKEKLLQQVIFTWMEGTTGTSNVENCVDDSLGQCCSDPSICASSQKTEMVKKTCDMMSTGKRKHLEFSADITNVMEAHPINDILLWHNAIKKELNEIAEEARNIQLSGNFDNLSAFNERLHFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNEFRSLIESIQSDGEISSSSAEFYEKLCSHADQIMDTIQRHFNNEELQVLPLARKHFSLKRQREILYHSLCMMPLKLIERVLPWLVGSSSEDEAENFLKNIQLAAPTSDTALVTLFSGWACKARNRGLCLSSRVTGSCPVKRFIEIEETFVPSFCSCASVVSARETASSTNSGRPERPAKRNVSVSCKSCVSSSFSEAANLQQSCCSDESCCVPGLGVNSNNLGLSSLFTTKSLCSLSPISGAPSLNSSLFSWETDISFSDIGPSGRPIDTIFKFHKAIRKDLEYLDVESGKLNQCDETSLRQFIGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEERLFEDISSVLLDLSHLHVNSALDDDLPTNSYNSMGKKYVELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNIMMDTWKQATKNTMFNEWLNECWKGPEASTIRTGTLESDTTQKASVNQCDQLFKPGWKDIFRMNQNEIESEIRKVYQDLTLDPRRKAYLVQNLMTSRWIAAQQKLPEVTAGSSNSEDVVGRSPSYSDPEKSKFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCMTIQAVGRTCSTPSCNEFSMAKYYCNICKFFDDERTVYHCPFCNLCRLGKGLGLDYFHLQQSERYPVVITCIQLAFRHILVAITPVLFAANRWETWRFILACLTLCWLLKSSQTSTEVVVRIYYAMTVIGRGCHDFTGYITSVDLVVHTTPESSRVRLQMQIARNQIDERFY 1205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6011704 6020273 - BLOR05451 Blo13g00170 68565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00170 1205 ProSiteProfiles Plant heme peroxidase family profile. 529 793 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g00170 1205 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 28 1093 - -
Blo13g00170 1205 Gene3D nmb1532 protein domain like 652 873 - -
Blo13g00170 1205 Pfam CHY zinc finger 988 1063 IPR008913 GO:0008270
Blo13g00170 1205 SUPERFAMILY CHY zinc finger-like 980 1044 IPR037274 GO:0008270
Blo13g00170 1205 CDD Hr-like 50 176 - -
Blo13g00170 1205 Gene3D nmb1532 protein domain like 45 196 - -
Blo13g00170 1205 Gene3D nmb1532 protein domain like 314 458 - -
Blo13g00170 1205 CDD Hr-like 312 440 - -
Blo13g00170 1205 CDD Hr-like 659 809 - -
Blo13g00170 1205 SUPERFAMILY Zinc hairpin stack 1054 1092 IPR037275 -
Blo13g00170 1205 PANTHER CHY ZINC FINGER PROTEIN 28 1093 - -
Blo13g00170 1205 ProSiteProfiles Zinc finger CHY-type profile. 981 1050 IPR008913 GO:0008270
Blo13g00170 1205 Pfam Hemerythrin HHE cation binding domain 308 442 IPR012312 -
Blo13g00170 1205 Pfam Hemerythrin HHE cation binding domain 52 178 IPR012312 -
Blo13g00170 1205 Pfam Hemerythrin HHE cation binding domain 657 810 IPR012312 -
Blo13g00170 1205 ProSiteProfiles Zinc finger CTCHY-type profile. 1053 1119 IPR017921 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00831 Blo13g00170 CCT
Blo04g00831 Blo13g00170 ECH
Blo13g00170 Blo15g00066 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00831 Blo-Chr4:8806497 Blo13g00170 Blo-Chr13:6011704 0 dispersed
Blo13g00170 Blo-Chr13:6011704 Blo15g00295 Blo-Chr15:3279227 1.32E-14 dispersed
Blo13g00170 Blo-Chr13:6011704 Blo15g00066 Blo-Chr15:557250 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00170 K16276 - csv:101215023 1665.97