Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00180 ATGTCTGAGCTAGATTTATCTAAGAAAGTAGCGGATAGGTACCTGAAACGGGAGGTCCTCGGTGAAGGTACTTATGGAGTTGTCTATAAAGCCATTGATACCAAGACAGGCCAAACAGTTGCAATTAAGAAAATTCGATTGGGGAAACAGAAAGAAGGTGTAAATTTCACTGCTCTCCGTGAGATAAAACTGCTTAAAGAGCTTAAGGATCCTAATATAATAGAGTTAATAGATGCATTCCCTCATAAGGGGAACTTGCATCTCGTATTTGAATTCATGGAGACTGATCTTGAAGCTGTCATACGAGATCGAAACATATTTCTCTCTCTAGCTGACATAAAATCATACCTACAGATGACATTGAAAGGTCTTGCCTTTTGCCACAAGAAATGGGTTTTACACAGGGATATGAAGCCTAACAATTTGTTGATAGGATCTAACGGCCAACTAAAATTAGCAGATTTTGGTTTGGCCCGAATTTTTGGGAGCCCAGATCGGAAATTCACTCATCAGGTATTTGCTCGATGGTATAGAGCGCCTGAGTTATTATTTGGTACCAAACAATATGGATCTGGGGTAGATGTCTGGGCTGCAGCTTGTATTTTTGCTGAACTTCTCCTTCGACGACCATTCCTTCAAGGTTCCAGTGACATTGATCAATTAGGAAAGATTTTTGCTGCCTTTGGGACACCTACACCTTCACAGTGGCCAGATATGGTGTTTTTGCCAGATTATGTTGAGTACCAATATGTTCCTGCACCTCCCTTACGAACATTATTTCCCATGGCTAGTGATGATGCATTAGACCTTCTGGCAAAGATGTTTTCTTATGACCCAAATGCTAGAATATCAGTTCAACAGGCATTGGAGCACAGATACTTTGGATCTGCACCTCTGCCTACTGATCCTTATAAGCTCCCTAGACCTGCACCAAAGAGGGAGGTTATGAGTACAAATGAAGGTTCGATTGTTCTCTCACCTCCAAGAAAATCAAGGAAAGTGATGCCAAACCCTGATGGATTTGAGGGAAATGGATTCCGAGGTGATGAGGTTGATAGTCGTGGAACTAATGTTGGGGTAGCTGTTGGGGCAACCAAGAACGCATTGGTGCCTATGTCAGTGGATTTTTCTATTTTTGGTTTAAAACCTTCAAATAGACCAACTATTGACAGGTAA 1176 41.5 MSELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSLADIKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMVFLPDYVEYQYVPAPPLRTLFPMASDDALDLLAKMFSYDPNARISVQQALEHRYFGSAPLPTDPYKLPRPAPKREVMSTNEGSIVLSPPRKSRKVMPNPDGFEGNGFRGDEVDSRGTNVGVAVGATKNALVPMSVDFSIFGLKPSNRPTIDR 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6894448 6896498 + BLOR05461 Blo13g00180 68575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00180 391 MobiDBLite consensus disorder prediction 323 350 - -
Blo13g00180 391 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00180 391 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Blo13g00180 391 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Blo13g00180 391 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00180 391 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 352 - -
Blo13g00180 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Blo13g00180 391 PANTHER CELL DIVISION PROTEIN KINASE 9 352 - -
Blo13g00180 391 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Blo13g00180 391 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00180 391 SUPERFAMILY Protein kinase-like (PK-like) 9 301 IPR011009 -
Blo13g00180 391 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00840 Blo-Chr3:34120859 Blo13g00180 Blo-Chr13:6894448 1.75E-65 dispersed
Blo13g00180 Blo-Chr13:6894448 Blo15g00063 Blo-Chr15:501607 0 dispersed
Blo13g00180 Blo-Chr13:6894448 Blo13g00685 Blo-Chr13:29587981 1.91E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84613 PF00069 Pkinase 3.60E-71 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00180 K02202 - qsu:112031301 676.781