Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00203 ATGAACAAGGTTGAAAGTTGGGAGAAAGAGATGGAAGAGATGAAACTTGAGTTGCAACACATTCCGGGAATAGAACAGTCCATGGAATTGTTGTCTCAAAATGTTGCAAAACTTTTACAGTTGATGGAGGATCAACAACAATTCCTCAAATTTGTGGCTTCGGAAAAATTTTCAGTGGAACGAGTTTCCTTGGAACCAAAATCTCATGTGATGTTTCCAGTCGCAGTAACATGTGGGAATACCTTTGTTTTAAAGCCCTCTGAAAAGGATCCAGGGGCGTCTATAATTCTGGCAGAGTTGGCAACAGAGGCTGGGTTGCCTGATGGTGTCTTAAACATTGTTCACGGCACCAATGAGATTGTTAACGCCATTTGTGATGCCGACGACATAAGAGCTGTATCATTTGTGGGTTCTAATACTATTCAAGCGGTTGTGTATTTTGAAACTGATGTTTCACTACTCTTCTTGTTCTGTGTCCTCAACTCTCTGTTTTGGATGTTTACAGTTCCCGCTAGTTATAAGCTTTCAGCGGGAATGCACATTTATTCAAGAGCGTCAGCCAAAGGAAAACGTTCTAATATGGGAGCCAAGAATCACGCTATTATAATGCCTGACGCAAGTATAGATGCTACTCTGAATTCTTTAGTCGCTGCTGGTTTTGGTGCTGCAGGACAGAGATGCATGGCACTTAGCACGGCTGTATTTGTTGGTGGCTCAGAGGCATGGGAGAAAAAACTTGTGGAACGAGCCAATGCTTTGAAGGTAAACTCAGGAATGGAATCTGATGCAGATCTTGGTCCAGTAATTAGCAAACAGGCAAAAGAAAGAATCTGCAGATTAATTGAATCGGGTGTCCAAAGTGGAGCAAGGCTGCTGCTTGACGGGAGAAGTATTGTGGTATTTTTTCTTGCCTTATTGTTCGGCTTCTTTGATTTGAAACTTTATCATTACCAATTTTATAATTTCACATGTTTATGTAGCATCTGGCAATCAATGTTTAAGGATGAAGGGAAATCAGAAGTAGTAGAAAACAAGAAGATAGAATTTGATGAGAAACTTTAG 1062 40.68 MNKVESWEKEMEEMKLELQHIPGIEQSMELLSQNVAKLLQLMEDQQQFLKFVASEKFSVERVSLEPKSHVMFPVAVTCGNTFVLKPSEKDPGASIILAELATEAGLPDGVLNIVHGTNEIVNAICDADDIRAVSFVGSNTIQAVVYFETDVSLLFLFCVLNSLFWMFTVPASYKLSAGMHIYSRASAKGKRSNMGAKNHAIIMPDASIDATLNSLVAAGFGAAGQRCMALSTAVFVGGSEAWEKKLVERANALKVNSGMESDADLGPVISKQAKERICRLIESGVQSGARLLLDGRSIVVFFLALLFGFFDLKLYHYQFYNFTCLCSIWQSMFKDEGKSEVVENKKIEFDEKL 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8401545 8414412 - BLOR05484 Blo13g00203 68598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00203 353 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 220 231 IPR016160 GO:0016491
Blo13g00203 353 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 70 146 - -
Blo13g00203 353 SUPERFAMILY ALDH-like 177 300 IPR016161 GO:0016491
Blo13g00203 353 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 70 146 IPR010061 GO:0004491
Blo13g00203 353 Pfam Aldehyde dehydrogenase family 177 296 IPR015590 GO:0016491
Blo13g00203 353 Pfam Aldehyde dehydrogenase family 71 144 IPR015590 GO:0016491
Blo13g00203 353 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 68 152 IPR016162 GO:0016491
Blo13g00203 353 SUPERFAMILY ALDH-like 72 145 IPR016161 GO:0016491
Blo13g00203 353 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 176 300 IPR010061 GO:0004491
Blo13g00203 353 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 195 297 IPR016163 GO:0016620
Blo13g00203 353 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 177 194 IPR016162 GO:0016491
Blo13g00203 353 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 176 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00732 Blo-Chr5:25866182 Blo13g00203 Blo-Chr13:8401545 3.23E-78 dispersed
Blo13g00203 Blo-Chr13:8401545 Blo15g00791 Blo-Chr15:27024539 1.09E-17 dispersed
Blo13g00203 Blo-Chr13:8401545 Blo01g00700 Blo-Chr1:8424355 1.11E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00203 K00140 - pop:7487827 322.013