Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00206 ATGGAAAATATTGCGGCGCAATTGAAGAGGGGGATATCGAGGCAGTTTTCCACAGGTACGCTTGGGCGGAACCTGAGCCGGCAGTTTACGCGGCAGTCATCGCTTGACCCGAAGCGGAACACTATGAGATTTAGCTTCGGAAGGCAGTCTTCGCTGGACCCCATCCGGCGCAGCCCTAGTCGTGAGAACGACCTATCCGTACCTGAGAACCTTGACTCCACCATGAACCTTCTTTTTTTGGCGTGCCGGGGCGACGTCAAGGGAGTCAATGATTTACTCGATGAGGGGGTCGATGTCAATAGCATCGACTTAGATGGCCGAACTGCGTTGCATATCGCCGCATGCGAAGGCCATGTTGAGGTTGTCAAGCTCTTGCTCAGCCGAAGGGCCAATATGGATGCTCGTGATCGCTGGGGCAGTACGGCAGCTGCTGATGCCAAATACTATGGGCAGACACAGGTTTTCAACATCTTGAAGGCTCGCGGAGCAATAGTTCCTAAAAACAAGAAAACACCAATGACGGTTGCAAATCCCCGTGAAGTTCCAGAGTATGAGCTTAATCCACTTGAGCTTCAAATCCGTAGGACTGATGGCATCTCAAAGGGCACGTACCAAGTCGCTAAATGGAATGGAACGAAGGTTGCAGTAAAAATACTTGATAAAGAGAGCTACTCAAACCCTGATACTATAAATGCTTTCAGACACGAGTTAACTCTATTAGAAAAGGTCCGCCATCCAAACGTGGTACAATTTGTTGGAGCAGTTACCCAGAATGTTCCCATGATGATCATATCAGAGTATCATTCGAAGGGAGACTTGGCTGGCTATCTTCAAAAGAAAGGGCGCTTGTCTCCATCTAAAGCTCTCAGATTTGCTCTTGACATTGCTAGGCATGTCTTGGGTATGAACTATCTCCATGAAGTTAAGCCAGACCCTATTATCCACTGTGATCTAAAGCCAAAAAATATTTTGCTCGACGTTGGAGGTCAATTGAAGGTAGCTGGATTTGGTTTGATAAGGTTGTCAAAAATTTCACCAGACAAAGCAAAACTAGCACTCCCTGACGCTAACGTTGACCTTTCAAGCATATATTTGGCGCCTGAGGTTTACAAGAACGAAATATTTGACAGAAGTGTGGACTCGTTTTCTTTTGGTCTAATTGTATATGAGATGATTGAGGGCATACAACCTTTCCTTCCTAAACCTCCGGAAGAGGCTACCAAAGTCATATGTTTGGAAGGACAAAGACCTCAACTCAAGAACAAATTGAAAAATTATCCACCAGATTTAATAGAGTTAATTGAGGAATGCTGGGATCCAGAACCTGTTGTGAGGCCAACTTTTTCTGAGATCATCGTTCGTTTGGATAAAATAGTGTCCAACTGCTCAAAACAAGGATGGTGGAAGGACACTTTTAAGCTTCCGTGGTATGTCTTCTAA 1440 45.49 MENIAAQLKRGISRQFSTGTLGRNLSRQFTRQSSLDPKRNTMRFSFGRQSSLDPIRRSPSRENDLSVPENLDSTMNLLFLACRGDVKGVNDLLDEGVDVNSIDLDGRTALHIAACEGHVEVVKLLLSRRANMDARDRWGSTAAADAKYYGQTQVFNILKARGAIVPKNKKTPMTVANPREVPEYELNPLELQIRRTDGISKGTYQVAKWNGTKVAVKILDKESYSNPDTINAFRHELTLLEKVRHPNVVQFVGAVTQNVPMMIISEYHSKGDLAGYLQKKGRLSPSKALRFALDIARHVLGMNYLHEVKPDPIIHCDLKPKNILLDVGGQLKVAGFGLIRLSKISPDKAKLALPDANVDLSSIYLAPEVYKNEIFDRSVDSFSFGLIVYEMIEGIQPFLPKPPEEATKVICLEGQRPQLKNKLKNYPPDLIELIEECWDPEPVVRPTFSEIIVRLDKIVSNCSKQGWWKDTFKLPWYVF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8500333 8505808 + BLOR05487 Blo13g00206 68601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00206 479 PIRSF ILK 8 476 - -
Blo13g00206 479 SUPERFAMILY Protein kinase-like (PK-like) 202 455 IPR011009 -
Blo13g00206 479 Gene3D Phosphorylase Kinase; domain 1 187 269 - -
Blo13g00206 479 ProSiteProfiles Protein kinase domain profile. 189 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00206 479 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Blo13g00206 479 SMART ANK_2a 105 134 IPR002110 GO:0005515
Blo13g00206 479 SMART ANK_2a 73 101 IPR002110 GO:0005515
Blo13g00206 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Blo13g00206 479 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 475 - -
Blo13g00206 479 CDD STKc_MAP3K-like 199 455 - -
Blo13g00206 479 Gene3D Transferase(Phosphotransferase) domain 1 270 471 - -
Blo13g00206 479 PRINTS Tyrosine kinase catalytic domain signature 307 325 IPR001245 GO:0004672|GO:0006468
Blo13g00206 479 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Blo13g00206 479 PRINTS Tyrosine kinase catalytic domain signature 426 448 IPR001245 GO:0004672|GO:0006468
Blo13g00206 479 PRINTS Tyrosine kinase catalytic domain signature 265 278 IPR001245 GO:0004672|GO:0006468
Blo13g00206 479 SUPERFAMILY Ankyrin repeat 61 177 IPR036770 -
Blo13g00206 479 MobiDBLite consensus disorder prediction 46 68 - -
Blo13g00206 479 SMART serkin_6 193 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00206 479 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 475 - -
Blo13g00206 479 Pfam Protein tyrosine and serine/threonine kinase 199 454 IPR001245 GO:0004672|GO:0006468
Blo13g00206 479 Gene3D - 39 184 IPR036770 -
Blo13g00206 479 Pfam Ankyrin repeats (3 copies) 78 163 IPR002110 GO:0005515
Blo13g00206 479 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01335 Blo-Chr4:29850882 Blo13g00206 Blo-Chr13:8500333 0 dispersed
Blo11g00260 Blo-Chr11:2080762 Blo13g00206 Blo-Chr13:8500333 2.42E-130 dispersed
Blo13g00206 Blo-Chr13:8500333 Blo16g01104 Blo-Chr16:39531690 2.41E-79 dispersed
Blo13g00206 Blo-Chr13:8500333 Blo06g00917 Blo-Chr6:32426851 2.16E-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84614 PF07714 PK_Tyr_Ser-Thr 4.50E-47 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00206 - - mdm:103446672 816.994