Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00224 ATGGAAACTTGGCTCAAACCATTCTGGCCGAAGCTCGACCGCCGGAAGGCCTTGAAGAACTTTGATCAAGCCTCCTCCTCTTCCTCTACACATTCTTCTTCTGACTCGAGTCTTCGAACTCGCTCTCTCGACCTTTATCCAACGAGCTTCAGGGTGCAGGGCGATGATGGTTCTCTCGATCTCATTTGTAATTGTTTGGGGCTTTCTGGGCCCGAGGATTTCGCGATCCCCGCTGCTGAATGGGAAGCCTTATGGTTAGGCTACTCATTTGATGTTTCCTCTCGTGCCCGCTCAAAGCATCTGAACGGCGATGATTTAGAGTTTCGCCGACCGTTTCGGAAGGCAAATGATGATTTTCCATCTCAATTTGATGTCAAATCGAACTTAGTAGGTGGGCTTGAAAGTGGACGGAGAGTTGGCGGTGAGGTTCCCAAATTGAATTCGATCTCGTCATACAAGAAGAAAGCTACGGATGTTAGAGGAGAATACATTTATGATGTACGGCCTCCTGTTCTTTCTCCTCCTTCGGGAAAATTGCGTTCAGTTGTTGATGATGTTAGCTCCACTCGGGAAATTTGCAAATCTTTTGCTCCCAAAGATGACAAACACCCTGCTTGTAATTTAAGTCATGCTGACGAAAACAAGGCCAGATTTACGGACGGTGAGAGATACAATGGAGGAGTTTGTGGAAGTGGATTGTTTGGTCCCTTGCATTCGGCTAACACAACAAATTGTTACAGTGATGAGTTGAGCTTAGGGGATCCAACAAATGTGAATGATAATGGTTCTAAGCTCGAATCTAAATTTGTTTCAGAAGCGGTGCATTATTTTACTCCCAATGGGAAATTCAAACGAAAAAATTCTTCATCATGGCAAAAATGTGATCTTTTGGGAAGCGGATCTTTCGGACTCGTATTTGAGGCGTTGACTGACGATGGCTTCTTTTTTGCTGTTAAGGAGGTTTCCTTGCGAACTCGAGGAAGTGTGGGAAAGGAGAGCATTCTTCAATTAGAGCAGGAGATTTCTCTTTTAAGTCAGTTCGAACATGAAAACATAGTTCAGTATCTTGGAACAGACCAGGACAGAAATAAATTATATATCTTCCTTGAGCTCCTTTCAAAAGGCTCATTAGCAAAGCTGTATCAAAGGTTTCGCTTGAAGAAGTCTCAAGTTTCTGCATATACAAGGCAGATTTTGGACGGTTTAAATTATCTTCATAAACAGAATATAGTTCACAGAGATATCAAATGTGCTAATATTTTGGTCAACGGAAATGGATCAGTGAAGCTTGCAGATTTTGGGCTGGCAAAGGCAATCAAATTTAATGATGCTAATTCATTTAAAGGAACTGCATACTGGATGGCGCCTGAGGTTGTAAATCTACAGACTCGGGGCTATGGGCTTCCAGCTGATATTTGGAGTCTTGGATGTACAGTGTTAGAGATGTTAACTGGTCAACCTCCGTATTCTCAGTTAAATGCCGTGCAAGCATTATATCAGATTGGGAATAAGGAACTCCCTCCACTTCCTCATTCCTTGTCTGGCGATGCTCGAGATTTCATCCTGAGTTGCTTGCAAGTTGACCCACATAGCCGGCCTAGTGCGGCTGAACTTTTAAATCATCCATTTGTCAGAATGTCGATTTGA 1647 43.23 METWLKPFWPKLDRRKALKNFDQASSSSSTHSSSDSSLRTRSLDLYPTSFRVQGDDGSLDLICNCLGLSGPEDFAIPAAEWEALWLGYSFDVSSRARSKHLNGDDLEFRRPFRKANDDFPSQFDVKSNLVGGLESGRRVGGEVPKLNSISSYKKKATDVRGEYIYDVRPPVLSPPSGKLRSVVDDVSSTREICKSFAPKDDKHPACNLSHADENKARFTDGERYNGGVCGSGLFGPLHSANTTNCYSDELSLGDPTNVNDNGSKLESKFVSEAVHYFTPNGKFKRKNSSSWQKCDLLGSGSFGLVFEALTDDGFFFAVKEVSLRTRGSVGKESILQLEQEISLLSQFEHENIVQYLGTDQDRNKLYIFLELLSKGSLAKLYQRFRLKKSQVSAYTRQILDGLNYLHKQNIVHRDIKCANILVNGNGSVKLADFGLAKAIKFNDANSFKGTAYWMAPEVVNLQTRGYGLPADIWSLGCTVLEMLTGQPPYSQLNAVQALYQIGNKELPPLPHSLSGDARDFILSCLQVDPHSRPSAAELLNHPFVRMSI 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9434105 9439344 + BLOR05505 Blo13g00224 68619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00224 548 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 10 89 - -
Blo13g00224 548 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 156 546 - -
Blo13g00224 548 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 89 - -
Blo13g00224 548 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 156 546 - -
Blo13g00224 548 Pfam Protein kinase domain 293 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00224 548 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Blo13g00224 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Blo13g00224 548 Gene3D Transferase(Phosphotransferase) domain 1 288 548 - -
Blo13g00224 548 SUPERFAMILY Protein kinase-like (PK-like) 276 545 IPR011009 -
Blo13g00224 548 ProSiteProfiles Protein kinase domain profile. 291 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00224 548 SMART serkin_6 291 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00224 Blo-Chr13:9434105 Blo18g00199 Blo-Chr18:1953006 8.11E-126 dispersed
Blo17g00188 Blo-Chr17:1912747 Blo13g00224 Blo-Chr13:9434105 6.82E-24 dispersed
Blo13g00224 Blo-Chr13:9434105 Blo17g00197 Blo-Chr17:1987384 1.19E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84616 PF00069 Pkinase 2.20E-69 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00224 K13414 - jre:109013413 488.419