Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00254 ATGGCTGCTACTGGAAATGGAGACAAATCAAGTCCCGTTGGAATAATTCAAATGCATGCAAACGACACTGAGAAAGGCCATTTACAAGCAACCCAGGATGGTCATATTGATTATTCGAGAAGAGGACAGTGGCTTCGAGCAGCTGTTCTGGGAGCCAATGATGGGCTTCTCTCGGTGTCGTCAATAATGATGGGCGTGGGAGGCGTGAAGAAAGATGCAAAAGCCATGTTTCTTGCAGGCTTTGCTGGCTTAGTTGCAGGAGCTTGTAGTATGGCGATAGGAGAGTTTGTCTCAGTTTACACTCAGTACGACATAGAAAAGGCTCAAATGAAAAGAGAGCAGAAAAATGGGAGAGGAATTGGCTCAAACCAAGGAGAAGGAGAGGAGAAAGAGAAGCTCCCAAGCCCAGTCCTGGCAGCCGTGGCTTCAGCCCTTGCATTTTCAGTCGGAGCCATGGTGCCGCTAGTGGGCGCGTCGTTCATAGAAGAGCAAAAGGTGAGGCTTGTGGTGATGGGGGCGGTGGCATGTGTGGCGCTTGCAGTGTTTGGAGCGGTGGGAGCAGTGCTTGGAAAGACACCAGTTGGGAGGTCTTGTTTTAGGGTTGTGATTGGAGGGGTGATGGCTATGGCCATCACATTTGGACTAACCAAACTGGCTGCATCCACCGGCCTTCAACTCTGA 681 50.51 MAATGNGDKSSPVGIIQMHANDTEKGHLQATQDGHIDYSRRGQWLRAAVLGANDGLLSVSSIMMGVGGVKKDAKAMFLAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQMKREQKNGRGIGSNQGEGEEKEKLPSPVLAAVASALAFSVGAMVPLVGASFIEEQKVRLVVMGAVACVALAVFGAVGAVLGKTPVGRSCFRVVIGGVMAMAITFGLTKLAASTGLQL 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11497399 11498079 + BLOR05535 Blo13g00254 68649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00254 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 221 IPR008217 GO:0005384|GO:0030026
Blo13g00254 226 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 17 221 - -
Blo13g00254 226 Pfam VIT family 45 116 IPR008217 GO:0005384|GO:0030026
Blo13g00254 226 Pfam VIT family 129 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00254 Blo-Chr13:11497399 Blo18g00140 Blo-Chr18:1299326 3.68E-76 dispersed
Blo13g00254 Blo-Chr13:11497399 Blo04g01315 Blo-Chr4:28514934 1.97E-109 wgd
Blo13g00254 Blo-Chr13:11497399 Blo04g01298 Blo-Chr4:27554153 2.01E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00254 K22736 - mnt:21403537 244.973