Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00257 ATGGAGAGAAATACCACTGTACATATTATTACTGTTGAAGCTTGCAAGTTGACATTAATTTTATTGGTATTTATTTCTTTAATTTTGATCAGTGGTTCACTTTTTCTTTTCGATCGAAAAGTTTTGAGATACTTTAGAAAGGATGGGCATAATTGGAGGAAGAAGAAAGATGGCAAGACCGTGAAGGAAGCTCACGAGAAGCTGAAGGTTGGAAGCATTGATGTATTACACTGTTATTATGCCCATGGAGAAGAAAATGAAAACTTTCAGCGACGCAGCTATTGGATGCTTGAAGAGGATTTAATGCACATTGTTTTCGTTCACTATCTGGAAGTTAAGATCATATCACCTCTTTCAACTGTAGTTGAAAATGACCTTGTCCCTGAGTTTTCGCTCAGAGAGGGTGAAAGAGATGGGGATAGGGGGGTTCATATCATTGGTATCAGAGCAATCCGTAAGCAGGAAAGCTGTTGTCAAGCTTGTTTAGAAGCGTTCAAGTTGTTGACAGTCACAAGTTTAATGGCTGGTAAGAGAAGAGAAGGAAAAGAAGCGGCTGAAGAAGGCAGAACCGGCCCAGTTCTTGAGGGATTCCAGTCGGAACTTGGGATTTTTCGCGATCAAGTTTCTCAAGATCTGGAAAAGTTGAAAGTCGACGTTGCTTCGCTCCAAACCATGAAGGCTGATCTGGCTTCGGTGATGGAGACTCTAGCTACGTTGTCGGCAACGTTGACGACGACACGCGACGAGGTTCGGACGGGGGTGAGGCGCGACGATGTCCGCGTAGGGTTGGAGCGCGACAAGGGAACCAGAACTAATGTTGGAGCGCCAAGAGAGACTGATGTTTCAAGTTCAAGAAAGAGCAGCCCTACAAGTACTAGTTTATCAAAAAGTCATGCCAAATCACTTTCTGGTTATTTGGATTCCCCCAGCACAACTAGCTCTGTGACGTCTTTGTGTGAAGATGCTGATTCTGAGGATGGCTACCAAGCAACTTCAAATTTTCATTCATTTCCGGAGTTGGCAATAGCACAAACCAGAAAATCTCCTCTCTTGGCTCAGACGGACATTGGCTTCCCAGATTTTTATGATCAGCGTCCAATCACTGGTAATCTTGTTTGCTTTTTTTCTATCACAGAGTATTCTCAACCTGCTGAGACAGATGGACTTCCAGATTTTGAAGAAAACTCTCCAGTGATTGATTCTCAAAAAACACTTGGTTCTGCCTCTTGGGAAGAGATCTTACAACAGTGTACGAGTGGATCCGACTCTGTACGATCTGCTGTTTCAACATCTACAACGAAGCCTATTACATCAAGGATTGTTCATGGGCAAGAAAATATGAATTCAAGCATTAATTTCTCAGTGGATAGTACCATCCGAGAGGACCATGGAACTTCTATGGCAATTTCATCAAATTGGCAGATTCCTGTTGGAGACAATGCATTACCTTTTCCAAAAGAGCATGTGGACCAATTATCAGACCCTGAAACTGTTTATGATCTGGATGCATGTGTGTCATGGCACAGAAATCATGATGCAGGTTTTGAAAATTCTCAGAAGTTACATCTTTCTCAGCTTGAAATGTTAAATGAACAAAATATGTCGAGCAATCTTCTGTACCAACTAGCAAATGGAGAATCCCAGTGCTTGATGAAATTGAATTCTGAGAAAGACTTGATCCTGGATGGAAATGTTCACTATGCTTCAACTTTGCGACAATCACTCTTAGGAGGAGAAGAAGCTTTGAAAAAAGTTGACAGTTTTTCTCGCTGGATATCTAATGAATTGGGGGAGGTAGATGACTTGCGTATGCATCCATCGCCAGGAATTTCATGGAGTGCTGATGAATGTGGAAATATTCATGACGATTCCTCCTTGAGCCCCTCCCTCTCTCAAGACCAGCTTTTCAGCATAACTGACTATTCTCCAAAGTGGTCATTCACGGACTTGGAAACTGAGGTTCTGATTGTTGGACGATTTTTGGGGATTTACCAAGATGTTGCCAAATGTAATTGGTCATGTATGTTTGGGGAAGTAGAGGTTCCTGCCATGGTTTTGGCCAACGGAATTCTTTGTTGCCGTGCTCCACCCCATAGCACAGGACAAGTGCCTTTTTATGTAACTTTTTCAAACAGATTAGCTTGCAGTGAAGTGCGAGAATTTCAGTATATGGCTGGCTCTGTCAAGGATGTGGATGTCACAGATATCTATGATGATGGTACAAATGAATTACTTCTGCATTCGCAACTTGACAGCTTATTATCCCTGAATTATCTTGGATCTTCTAGCAATATCTTTATAGATAATTTGGACAAACGAAATGTAATTCGTAAACTTATTGCACTCAAGGAGGAAAAAGATTATATTGTTGAGACAAATTCTCAGGAAGAACCGATCCAGCTGGAGAATAAGAAATATTTCTTTAAAATCCTGATGAAAGAAATGTTGTACTCATGGCTTCTCCATAAAGTTGTTGAAGATGGAAAAGGACCTAATGTGTTGGATGAAAATGGGCGAGGGGTAATTCATTTGGCTGCGGCTCTTGGTTATGATTGGGCCATGAAACCAATTGTGAGTGCAGGAGTTAGTATAAATTTCCGTGACATCAATGGATGGACTGCACTTCACTGGGCAGCGTCCTGTGGCAGGCAAGAATTTAGAACTTTAACGGTTGCAGTTCTTATTTCTTTGGGCGGTGGCGCGGGTCTCTTGACAGATCCTTCTCCTGAATATCCTTTGGGAAAAACACCTGCAGACCTCGCATCTGCCAAAGGTCACAAAGGGATCTCTGGGTTTTTGGCAGAATCTTCATTGACTAGCCATCTCTCAACTTTAACAATGAATGATACCAAGCAAGACAGTGCAGAAGTTTCATCCACCAAAATTGTGCATAGTGTGTCTGAAAGAATTGCAACTCCTGCCAATGATGGTTATTTGCCTGGTGAACTGTCTCTAAAGGATTCACTCTCAGCTGTTAGTCATGCTACACAAGTCGCCGATCGAATACATCTAATGTTCAGGATGCAGTCGTTTCAGAGGAAACAATTTGCAGAACACGACATTGATCAATTTGAACTTTTAGATGATCGTACGCTTTCGATTATTGCTACCAGAGCACTAAAGGGTGGACAAGGCAACGGGCTTGCACATTCTGCCGCAATTCACATACAGAAAAAGTTTCGTGGTTGGAAAAAAAGAAAAGAGTTCTTGTTGATTCGTCAAAGAATAGTTAAAATACAGGCCCATGTCAGGGGACACCAGGTACGGAAGAAATACCCAGCAATGACCTGGTCAATTGGAATTGTAGATACTTTATTGCGTTGGAGACGGAAAGGAAGCAGTTTGCGGCCAATGGTGGTTCCTAAGGAACCTACCTCTGAAAGCAAGCCAGAAGAGGATGAGGATGATTTTTTGAAAAAAGGAAGGAAACAAACTGAGGAGAGGTTGCAAAAGGCACTTACTAGAGTTAAGTCTATGGCTCAGGATCCTCAGGGACGAGATCAGTACCGTAGGCTGCTAACTTTAGTTCATGGGATTCGTGAAAACAAGGTGTCTGGTATGGACATTACAGTTTCAGAGAATAGGGTTGATGAGGAACTGAATGAATTAGATGATATAATTGACGATGACACCTTAATGTCTATAACATTTGGTTGA 3657 41.95 MERNTTVHIITVEACKLTLILLVFISLILISGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEEDLMHIVFVHYLEVKIISPLSTVVENDLVPEFSLREGERDGDRGVHIIGIRAIRKQESCCQACLEAFKLLTVTSLMAGKRREGKEAAEEGRTGPVLEGFQSELGIFRDQVSQDLEKLKVDVASLQTMKADLASVMETLATLSATLTTTRDEVRTGVRRDDVRVGLERDKGTRTNVGAPRETDVSSSRKSSPTSTSLSKSHAKSLSGYLDSPSTTSSVTSLCEDADSEDGYQATSNFHSFPELAIAQTRKSPLLAQTDIGFPDFYDQRPITGNLVCFFSITEYSQPAETDGLPDFEENSPVIDSQKTLGSASWEEILQQCTSGSDSVRSAVSTSTTKPITSRIVHGQENMNSSINFSVDSTIREDHGTSMAISSNWQIPVGDNALPFPKEHVDQLSDPETVYDLDACVSWHRNHDAGFENSQKLHLSQLEMLNEQNMSSNLLYQLANGESQCLMKLNSEKDLILDGNVHYASTLRQSLLGGEEALKKVDSFSRWISNELGEVDDLRMHPSPGISWSADECGNIHDDSSLSPSLSQDQLFSITDYSPKWSFTDLETEVLIVGRFLGIYQDVAKCNWSCMFGEVEVPAMVLANGILCCRAPPHSTGQVPFYVTFSNRLACSEVREFQYMAGSVKDVDVTDIYDDGTNELLLHSQLDSLLSLNYLGSSSNIFIDNLDKRNVIRKLIALKEEKDYIVETNSQEEPIQLENKKYFFKILMKEMLYSWLLHKVVEDGKGPNVLDENGRGVIHLAAALGYDWAMKPIVSAGVSINFRDINGWTALHWAASCGRQEFRTLTVAVLISLGGGAGLLTDPSPEYPLGKTPADLASAKGHKGISGFLAESSLTSHLSTLTMNDTKQDSAEVSSTKIVHSVSERIATPANDGYLPGELSLKDSLSAVSHATQVADRIHLMFRMQSFQRKQFAEHDIDQFELLDDRTLSIIATRALKGGQGNGLAHSAAIHIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKKYPAMTWSIGIVDTLLRWRRKGSSLRPMVVPKEPTSESKPEEDEDDFLKKGRKQTEERLQKALTRVKSMAQDPQGRDQYRRLLTLVHGIRENKVSGMDITVSENRVDEELNELDDIIDDDTLMSITFG 1218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11839242 11852483 + BLOR05538 Blo13g00257 68652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00257 1218 Pfam CG-1 domain 31 111 IPR005559 GO:0003677
Blo13g00257 1218 MobiDBLite consensus disorder prediction 1117 1143 - -
Blo13g00257 1218 Pfam IQ calmodulin-binding motif 1050 1069 IPR000048 GO:0005515
Blo13g00257 1218 Pfam IQ calmodulin-binding motif 1074 1092 IPR000048 GO:0005515
Blo13g00257 1218 Coils Coil 1142 1162 - -
Blo13g00257 1218 Pfam IPT/TIG domain 637 722 IPR002909 -
Blo13g00257 1218 ProSiteProfiles IQ motif profile. 1072 1096 IPR000048 GO:0005515
Blo13g00257 1218 MobiDBLite consensus disorder prediction 275 318 - -
Blo13g00257 1218 SMART CG_1_2 1 113 IPR005559 GO:0003677
Blo13g00257 1218 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 31 114 - -
Blo13g00257 1218 ProSiteProfiles IQ motif profile. 1049 1078 IPR000048 GO:0005515
Blo13g00257 1218 SMART iq_5 1048 1070 IPR000048 GO:0005515
Blo13g00257 1218 SMART iq_5 1071 1093 IPR000048 GO:0005515
Blo13g00257 1218 MobiDBLite consensus disorder prediction 1125 1143 - -
Blo13g00257 1218 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 267 1217 - -
Blo13g00257 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1098 IPR027417 -
Blo13g00257 1218 SUPERFAMILY Ankyrin repeat 738 935 IPR036770 -
Blo13g00257 1218 MobiDBLite consensus disorder prediction 259 318 - -
Blo13g00257 1218 Gene3D - 814 979 IPR036770 -
Blo13g00257 1218 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 31 114 - -
Blo13g00257 1218 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 267 1217 - -
Blo13g00257 1218 Gene3D Immunoglobulins 631 727 IPR013783 -
Blo13g00257 1218 MobiDBLite consensus disorder prediction 259 273 - -
Blo13g00257 1218 ProSiteProfiles Ankyrin repeat profile. 870 906 IPR002110 GO:0005515
Blo13g00257 1218 ProSiteProfiles CG-1 DNA-binding domain profile. 3 118 IPR005559 GO:0003677
Blo13g00257 1218 Coils Coil 205 225 - -
Blo13g00257 1218 Gene3D - 1049 1097 - -
Blo13g00257 1218 SUPERFAMILY E set domains 638 723 IPR014756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00054 Blo-Chr1:683203 Blo13g00257 Blo-Chr13:11839242 4.73E-29 dispersed
Blo12g00279 Blo-Chr12:16649107 Blo13g00257 Blo-Chr13:11839242 9.52E-11 dispersed
Blo13g00257 Blo-Chr13:11839242 Blo16g00702 Blo-Chr16:26951610 1.77E-60 dispersed
Blo13g00257 Blo-Chr13:11839242 Blo01g00165 Blo-Chr1:2203598 4.60E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13126 PF01833 TIG 7.20E-06 CL0159 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00257 K21596 - csv:101203707 970.304