Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00264 ATGAAATCGCCTGCTGGTCGCCAGTGGAAGGAGTCGATGCGGGTTCGTCCGAGTATGATTAAGGTTTCGTTCAGAGAGAAACCTTCAAACGTCTGGAACAGTTCGGCCGATGCACTAATTTTGCCTAAAGATCTTGAGCTTGATTTCAGATCATATGGAGTATACAATATTAACGAGTTTGGATTGCAAAAGTGCTCCTCTTGGCCTGTGGATGATACTGATTATAGTGAAAAGACATACCGATGTGCTTCACATGAGATGAGAATATTTGGAGCAATTGGTAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATCCATATTCCCAGTCATAGAATTTTGGCTCTGAAAAAGATTAATATTTTTGAAAAGGACAAAAGGCAACAGCTTCTTACAGAGATAAGGACACTATGTGAAGCGCCATGTTACCAGGGTCTTGTAGAATTCAATGGAGCGTTTTTTACTCCTGACTCAGGACAAATCAGTATAGCTTTGGAGTACATGGATGGAGGCTCGTTGGCGGATATATTACGTATGAAAAAGAAAATACCAGAGCCTGTTCTTTCTTCAATGTTCCAAAAGATTCTGCAGGGACTGGGGTATTTGCATGGAGTTAGATATTTAGTCCACCGTGATATAAAGCCAGCTAATTTGCTCATAAATCTTAAGGGTGAGCCAAAAATAACAGATTTTGGTATAAGTGCGGGATTAGAGAATTCAATGGCGATGTGTGCTACTTTTGTTGGGACTGTTACGTACATGTCACCTGAACGGATTCGAAATGAAAATTACTCCTATCCTGCTGACATCTGGAGCCTTGGACTTGCTCTCTTTGAGTGTGGTACTGGAGAATTCCCATATACTGCTACTGAAGGTCCAGTAAATCTCATGCTGCAGATTTTGGATGACCCGTCACCATCACCACCAAAACACAGCTTTTCACCGGAGTTTTGCTCGTTTGTTGATTCTTGCTTGCAAAAGGATGCAGAGGCAAGGCCCACAGCCGATCAGTTGCTTGCACATCCATTTATCACAAAGTATGAGGATGCTCAAGTAGACTTGGCAGATTTTATAAGAAGTGTGTTTGACCCGACACAGAGGTTGAAGGACTTGGCAGATATGCTGACAATTCATTATTACTTACTCTTTGATGGACCTGATGACCTTTGGCATCACACGCGAACCTTGTATGATGAACGTTCAAATTTCAGTTTCGCAGAGAAGCTTTATGTTGGCCAAAATGACATTTTCGAAACTGTGTCAAATATTCGAAGCACATTAGCAGGTGATTGGCCTCCTGAAAAACTAGTGCATGTTGTTGAAAAGCTCCAGTGTCGAGCTCATGGACCAGATGGCGTTGCTATTCGAGTATCCGGATCGTTTATCATCGGGAACCAGTTTCTAGTGTGTGGAGATGGAGTTCAAGTGGAGGGCTTACCCCATTTTAAAGATCTTGCTGTCGATCTTGGCTCTCGGAGAATGGGCATGTTCCGCGAGCAGTTTATTATGGAGCCGAGTAGTGTTATTGGTCGATATGTTATTTCGAAACAAGAGCTTTATGTAACCCATCAGTAA 1572 42.56 MKSPAGRQWKESMRVRPSMIKVSFREKPSNVWNSSADALILPKDLELDFRSYGVYNINEFGLQKCSSWPVDDTDYSEKTYRCASHEMRIFGAIGSGASSVVQRAIHIPSHRILALKKINIFEKDKRQQLLTEIRTLCEAPCYQGLVEFNGAFFTPDSGQISIALEYMDGGSLADILRMKKKIPEPVLSSMFQKILQGLGYLHGVRYLVHRDIKPANLLINLKGEPKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYTATEGPVNLMLQILDDPSPSPPKHSFSPEFCSFVDSCLQKDAEARPTADQLLAHPFITKYEDAQVDLADFIRSVFDPTQRLKDLADMLTIHYYLLFDGPDDLWHHTRTLYDERSNFSFAEKLYVGQNDIFETVSNIRSTLAGDWPPEKLVHVVEKLQCRAHGPDGVAIRVSGSFIIGNQFLVCGDGVQVEGLPHFKDLAVDLGSRRMGMFREQFIMEPSSVIGRYVISKQELYVTHQ 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12400561 12406856 - BLOR05545 Blo13g00264 68659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00264 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Blo13g00264 523 SUPERFAMILY NTF2-like 368 465 IPR032710 -
Blo13g00264 523 Gene3D Phosphorylase Kinase; domain 1 67 168 - -
Blo13g00264 523 PANTHER - 44 521 - -
Blo13g00264 523 SUPERFAMILY Protein kinase-like (PK-like) 89 366 IPR011009 -
Blo13g00264 523 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 44 521 - -
Blo13g00264 523 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Blo13g00264 523 SMART serkin_6 87 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00264 523 Gene3D Transferase(Phosphotransferase) domain 1 169 367 - -
Blo13g00264 523 ProSiteProfiles Protein kinase domain profile. 87 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00264 523 ProSiteProfiles Nuclear transport factor 2 domain profile. 370 520 IPR018222 -
Blo13g00264 523 Pfam Protein kinase domain 91 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00264 523 Gene3D - 368 521 - -
Blo13g00264 523 CDD PKc_MAPKK_plant_like 88 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00264 Blo-Chr13:12400561 Blo16g00976 Blo-Chr16:38023577 1.52E-58 dispersed
Blo13g00264 Blo-Chr13:12400561 Blo14g00559 Blo-Chr14:8397327 1.30E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84618 PF00069 Pkinase 2.00E-58 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00264 K20607 - csin:114272195 830.091