Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00276 ATGTCAACTACGGCGCAGTCGCTCCGTTGCTCCTCCGCTAATCCTGGCGGAGGCAGCTTTGAAGCCCTCAATCGCATCCTCTCTGACCTCTGCATCCGCGGAAACCCTAAGGAGGGAGCTTTGTTAGCTTTGAAGAAACATTTAGAGGAAGAAGCTCGTGATCTTAGTGGAGAAGCTTTTTCCCGTTTCATGGATCAGTTGTATGAAAGGATTTCGAGTCTTTTAGAAAGTAATGATGTAGCAGAAAATTTGGGGGCTTTAAGAGTTATTGATGAGTTGATTGATGTTGCCCTTGGTGAAAACGCCCCCAAGGTTTCAAAGTTCTCAAATTATATACGGACTGTATTTGAGTCAAAGCGTGATCCTGAAATTTTGGTCCTTGCGAGTCGAGTTCTCGGTCACCTTGCTAGAGCTGGTGGAGCAATGACAGCAGATGAGGTGGAGCGCCAGGTTAAAATTGCTCTGGAGTGGTTGCGTGGGGAGAGGGTAGAGTATCGTCGATTTGCCGCAGTTTTAATCTTGAAGGAAATGGCAGAGAATGCTTCTACAGTATTTAATGTGCATGTACCTGAATTTGTCGACGCTATTTGGGTTGCTTTGAGGGATCCACAATTGGCAGTTCGGGAAAGAGCAGTGGAGGCATTACGAGCTTGCCTTCGTGTTATTGAGAAGCGTGAGACTCGTTGGCGCGTGCAGTGGTACTATCGAATGTTTGAGGCCACACACGATGGTTTGGGTAGAAATGCTCCTGTTCACTGCATACATGGTTCTTTGCTTGCAGTTGGAGAGCTTTTGAGGAATACTGGAGAATTTATGATGTCAAGGTACAGAGAGGTTGCCGACATTGTTCTTAGGTACCTTGATCATCGAGACCGTCTTGTTCGATTAAGCATAACATCTTTGCTGCCTCGAATTGCTCATTTCCTACGTGATCGATTTGTCACAAACTATTTGACGATATGCATGAATCATATTCTCACAGTTCTACGAACACCTGCTGAGCGTGCTAGCGGCTTTATTGCCCTTGGTGAGATGGCTGGTGCTTTGGATGGGGAGCTTGTCCACTATTTGCCAACAATATCTGGCCATTTACGAGATGCGATAGCTCCACGTAGAGGTAGACCCTCACTTGAGGCTTTGGCATGTGTTGGAAGCATTGCAAAAGCTATGGGGCCTGCTATGGAGTCTCACGTTCGTTCTCTGTTAGATGTTATGTTTTCTTCTGGTCTTTCCCCTACTCTTGTAGAAGCTCTTGGACAAATAACAATCAGCATTCCATCATTGCTACCTAGTATTCAGGAGCGGTTGCTTGAATGCATATCAATTGTTCTGTCAAAATCCCACTACTCTTTGGGCAGGGCAGCTGTTGGAGTGAGTCGAGTAAATGTGATGAATGTTCCTCAACAAGTTTTAGGTCATGGTGGTTCATCCCTAGTGCAACTTGCCTTGCTGACACTTGCTCGTTTTAATTTCAAGGGCCATGAGCTTCTTGAGTTTGCAAAAGAATCAGTTGTTATGTATTTGAATGATGATGATGGTGCAACACGGAAAGATGCTGCCCTTTGTTGTTGCAGATTAGTAGCGAACTCCTTCTCTAGTATGACTGGTGCACAGTTTTCATCTAGTAGATTAGGTCGAACGGGTGGAAAGCGACGGCGTCTTGTTGAGGAGCTTGTAGAAAAGCTTCTCATTGCTGCTGTTGCAGATGCTGATGTCACAGTTCGCAATTCGATTTTTTCATCTTTGCATGGAAATAGAGGGTTTGATGATTTTTTAGCGCAGTCCGATAGCCTGAGTGCGGTTTTTGCTACTCTAAATGATGAGGATTTTGAGGTTCGGGAGTATGCTATTTCTGTATCTGGGAGGCTGTCAGAGAAAAATCCTGCTTATGTTCTTCCCGCACTTCGTCGTCATCTCATTCAGTTGTTGACATACCTAGAGCAGAGTGCAGATAGCAAAAGCCGAGAAGAAAGTGCAAAATTACTGGGATGTTTGATTCGAAATTGTGAACGACTAATACATCCATACATTGCACCAATTCATAAGGCACTTGTTGCTAGACTTAGTGAGGGCACTGGGGTGAATGCTAACAATGGGATTATTACAGGAGTTCTTGTTACTGTCGGAGATCTTGCAAGAGTGTGCTTTTTGGTTTGGCAAGCTGAGGTGTTGGTGATTATAGAAGTCTTGTCACAACTCCCATTATTGGAAGACAATCTGAACTTTCTCAAGGAGGAGCAAGTGGCAAAAATGACGGAAAAGATTGATGAAAGTAGAAATGCTGCAGATCAAGCGATGAACAAAAACGCAAAATGGGTTTCTGATAATTGCAACGACAACGATAGCTGA 2349 44.44 MSTTAQSLRCSSANPGGGSFEALNRILSDLCIRGNPKEGALLALKKHLEEEARDLSGEAFSRFMDQLYERISSLLESNDVAENLGALRVIDELIDVALGENAPKVSKFSNYIRTVFESKRDPEILVLASRVLGHLARAGGAMTADEVERQVKIALEWLRGERVEYRRFAAVLILKEMAENASTVFNVHVPEFVDAIWVALRDPQLAVRERAVEALRACLRVIEKRETRWRVQWYYRMFEATHDGLGRNAPVHCIHGSLLAVGELLRNTGEFMMSRYREVADIVLRYLDHRDRLVRLSITSLLPRIAHFLRDRFVTNYLTICMNHILTVLRTPAERASGFIALGEMAGALDGELVHYLPTISGHLRDAIAPRRGRPSLEALACVGSIAKAMGPAMESHVRSLLDVMFSSGLSPTLVEALGQITISIPSLLPSIQERLLECISIVLSKSHYSLGRAAVGVSRVNVMNVPQQVLGHGGSSLVQLALLTLARFNFKGHELLEFAKESVVMYLNDDDGATRKDAALCCCRLVANSFSSMTGAQFSSSRLGRTGGKRRRLVEELVEKLLIAAVADADVTVRNSIFSSLHGNRGFDDFLAQSDSLSAVFATLNDEDFEVREYAISVSGRLSEKNPAYVLPALRRHLIQLLTYLEQSADSKSREESAKLLGCLIRNCERLIHPYIAPIHKALVARLSEGTGVNANNGIITGVLVTVGDLARVCFLVWQAEVLVIIEVLSQLPLLEDNLNFLKEEQVAKMTEKIDESRNAADQAMNKNAKWVSDNCNDNDS 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14232045 14238486 + BLOR05557 Blo13g00276 68671

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00276 782 MobiDBLite consensus disorder prediction 759 782 - -
Blo13g00276 782 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 12 720 - -
Blo13g00276 782 SUPERFAMILY ARM repeat 151 717 IPR016024 -
Blo13g00276 782 PANTHER SERINE/THREONINE-PROTEIN KINASE TOR 12 720 IPR026683 GO:0004674
Blo13g00276 782 Coils Coil 748 768 - -
Blo13g00276 782 Gene3D - 19 232 IPR011989 -
Blo13g00276 782 Gene3D - 537 692 IPR011989 -
Blo13g00276 782 MobiDBLite consensus disorder prediction 762 782 - -
Blo13g00276 782 Gene3D - 247 472 IPR011989 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00276 K07203 MTOR, FRAP, TOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] - csv:101212051 1190.25
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g774 . . . . . Bpe12g00734 . . Cmo19g00552 . . . . . . . Cpe15g00427 Bhi05g01001 . . . . . . Cla02g00700 Cam02g0733 Cec02g0747 Cco02g0772 Clacu02g0744 Cmu02g0739 Cre02g1052 Cone12ag1029 . . . Lsi03g00601 Csa07g00668 . Cme01g00136 . Blo13g00276 Bda15g00469 . . . . Bma08g00017 . . . . Cma19g00538 . Car19g00395 . . . . . . . . . . . . . . . . . . Chy01g00147 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006863 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 2 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00276 Blo_Chr13 FPKM 0.698378 0.627486 1.314303 0.614039 1.258036 1.237822 1.424966 1.589625 1.656657 1.72049