Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo13g00300 | ATGTATGTATACTGGTGTCCATTTTCATGTAAAATGTCATTCCGAAGCATTGTCCAGGATGTAAGAGATTGTGCAGGGAGTTTATCTAGACGGAGGTTTGAGGTCAGGCTGACTTCTCATGGAAGAGGAAAGTCACACGGGTCATTGCATGATTTTGATAATCAGCAGAATGTGGTTCAGAGCAGTTGTTGGGCGACCCTACCACCTGAACTTCTGTACGAAGTCATTCGCAGACTGGAAGAGAGTGAAAGCACTTGGCCTTCTCGAAAACATGTTGTGGCCTGTGCTGCAGTGTGCCATTCTTGGAGGGTGATGTGCAAAGAAATTGTTAAAAGTCCAGAGTTTTGTGGGAAGCTTACATTTCCCATCTCCCTGAAGCAGCCAGGGCCACGAGTCGGAAGCATTCAGTGCTTTATTAGAAGGGATAAATCTAATCTAACATACCACCTCTTTCTGTGCCTTAGCCCTGGCAAGTCCTTATTAGTTGAAAACGGAAAGTTTCTCCTCTCGGCTAAACGAATTCGAAAAACTACGAACACAGAGTACATAATCTCTACAAATGCTGATAACATTTCAAGATCAAGCAACACTTTCATTGGGAAGCTGAGGTCAAATTTTCTCGGGACGAAATTCATCATATACGACACACAGCCTCCATATGCTTTGGCTCCCCTCCCTCCTCCCGGGAGAACAAGCAGAAGGTTCTATACCAAAAAGGTGTCTCCAAAAGTCCCAAGCGCCCACTATGACATAGCCCATATAGCTTACGAACTAAATGTGCTAGGCACACGTGGCCCTCGGAGAATGCACTGTGTGATGGATTCGGTTCCCGCCTCAGCTCTTATTATAGGAAATACAGTTCCTGGCCAACCAGAGCTCATCACACGATGCCTTGAAGACTCGTTCCGAACTATGTCATTCTCCAAATCTGTTCATCACTCAACTGAATTCAGTAGTGCCAGATTTTCTGAATACAGAAGAATTGGTAGCGATGATGAGAATGTTGAATCAAGACCCTTGGTTCTTAAAAATAAGCCCCCAAGATGGCATGAACAATTGCAATGCTGGTGCCTGAATTTCCGAGGGCGAGTGACTGTGGCATCTGTCAAGAACTTTCAGCTGATTGCCGCTGCACAGCCAGCTGGGGCAGCAACGCCGTCTCAGCCAACTCCGCCTGAGCATGACAAGATAATTCTGCAGTTTGGTAAGGTGGGTAAAGACATGTTCACCATGGATTACTGCTATCCGCTTTCGGCTTTTCAGGCATTTGCGATCTGCTTGAGCAGCTTCGACACAAAATTGGCTTGTGAATATGGGAGTTACTGCAGAGCCAACGTTAGCTATGTGCAGAGGCTTACCACTTGCAGTGACAACGTGTGCAGAGCCGTGGTAAGGGGTGGAGTCTGTCAAGGCAGAGGGGGACAGAGTGAAATGGTGGTTGCGCCGCAGTCCAAAAGCCAGGAGGATGAGGAAATGGAGGAAGGGAAGGGGCAGAGGGAGAGGAAGGAGGGGCTGTGCTGGAAGAGGCCATTTTTTGGCTCTGATACCAAGTTGAGAAATGTAGAATTTGCTAGAGAGAAAGGAAGAAAGTGGAGACCGAGAAGTCACAGAATAGGAGGACCTTACCTCATCCAGTCGCCGATGGTTTATCACTATCGGAATTGCTCCCGGAGGCTCGGCCTCTCCCCGAAGCCCTCACCTGAAAGAAACCCATCGCCTGAAGCCGTCCCTTGCACCAGGCGCAATAGGAATCGCAGCATTGCGAGTTCTGCACGCACCCACGGTCGTGCCCCATCGAAGCCATCTCGTAACACGCCCTGCCCATCACCTCGTTGCCCGCTTCTCGCCAAACAGCGCTTCGTCTTCGTGAAGAAGCTTCGGCCGCGAAGGAGAATCGCAAGACCGCATATGGCCTCACCCCTCTCCCTCTTTTGTATTCTGCTTCTAGTTTTACCCCTTCTCCTTCATTAA | 1971 | 48.81 | MYVYWCPFSCKMSFRSIVQDVRDCAGSLSRRRFEVRLTSHGRGKSHGSLHDFDNQQNVVQSSCWATLPPELLYEVIRRLEESESTWPSRKHVVACAAVCHSWRVMCKEIVKSPEFCGKLTFPISLKQPGPRVGSIQCFIRRDKSNLTYHLFLCLSPGKSLLVENGKFLLSAKRIRKTTNTEYIISTNADNISRSSNTFIGKLRSNFLGTKFIIYDTQPPYALAPLPPPGRTSRRFYTKKVSPKVPSAHYDIAHIAYELNVLGTRGPRRMHCVMDSVPASALIIGNTVPGQPELITRCLEDSFRTMSFSKSVHHSTEFSSARFSEYRRIGSDDENVESRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAQPAGAATPSQPTPPEHDKIILQFGKVGKDMFTMDYCYPLSAFQAFAICLSSFDTKLACEYGSYCRANVSYVQRLTTCSDNVCRAVVRGGVCQGRGGQSEMVVAPQSKSQEDEEMEEGKGQRERKEGLCWKRPFFGSDTKLRNVEFAREKGRKWRPRSHRIGGPYLIQSPMVYHYRNCSRRLGLSPKPSPERNPSPEAVPCTRRNRNRSIASSARTHGRAPSKPSRNTPCPSPRCPLLAKQRFVFVKKLRPRRRIARPHMASPLSLFCILLLVLPLLLH | 656 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 15994859 | 16003136 | - | BLOR05581 | Blo13g00300 | 68695 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo13g00300 | 656 | MobiDBLite | consensus disorder prediction | 484 | 501 | - | - | |
Blo13g00300 | 656 | MobiDBLite | consensus disorder prediction | 560 | 611 | - | - | |
Blo13g00300 | 656 | Pfam | Tub family | 125 | 432 | IPR000007 | - | |
Blo13g00300 | 656 | PRINTS | Tubby superfamily signature | 248 | 275 | IPR000007 | - | |
Blo13g00300 | 656 | PRINTS | Tubby superfamily signature | 394 | 413 | IPR000007 | - | |
Blo13g00300 | 656 | PRINTS | Tubby superfamily signature | 415 | 437 | IPR000007 | - | |
Blo13g00300 | 656 | PRINTS | Tubby superfamily signature | 360 | 376 | IPR000007 | - | |
Blo13g00300 | 656 | PRINTS | Tubby superfamily signature | 342 | 359 | IPR000007 | - | |
Blo13g00300 | 656 | PRINTS | Tubby superfamily signature | 198 | 222 | IPR000007 | - | |
Blo13g00300 | 656 | PRINTS | Tubby superfamily signature | 182 | 198 | IPR000007 | - | |
Blo13g00300 | 656 | SUPERFAMILY | Tubby C-terminal domain-like | 113 | 437 | IPR025659 | - | |
Blo13g00300 | 656 | SUPERFAMILY | F-box domain | 57 | 108 | IPR036047 | GO:0005515 | |
Blo13g00300 | 656 | Pfam | F-box domain | 64 | 110 | IPR001810 | GO:0005515 | |
Blo13g00300 | 656 | ProSitePatterns | Tub family signature 2. | 422 | 437 | IPR018066 | - | |
Blo13g00300 | 656 | ProSitePatterns | Tub family signature 1. | 360 | 373 | IPR018066 | - | |
Blo13g00300 | 656 | PANTHER | TUBBY-LIKE F-BOX PROTEIN 10-RELATED | 12 | 437 | - | - | |
Blo13g00300 | 656 | Gene3D | Tubby Protein; Chain A | 124 | 431 | IPR025659 | - | |
Blo13g00300 | 656 | MobiDBLite | consensus disorder prediction | 475 | 501 | - | - | |
Blo13g00300 | 656 | PANTHER | TUBBY-RELATED | 12 | 437 | - | - | |
Blo13g00300 | 656 | MobiDBLite | consensus disorder prediction | 577 | 602 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo13g00300 | Blo-Chr13:15994859 | Blo15g00775 | Blo-Chr15:26557088 | 0 | dispersed | |
Blo13g00300 | Blo-Chr13:15994859 | Blo02g00865 | Blo-Chr2:33067374 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13128 | PF01167 | Tub | 2.80E-110 | CL0395 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo13g00300 | K19600 | - | jre:109007061 | 687.182 |