Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00310 ATGTCAGGCCAAAGCCAGCGTTTGAATGTGGTTCCTACAGTTACAATGCTTGGTGTTATGAAAGCTCGTCTTATTGGTGCAACAAGAGGTCATGCCCTCCTCAAGAAGAAGAGTGACGCTTTGACTGTGCAGTTCCGCCAGCTTCTAAAGAAAATTGTTTCGACGAAGGAATCAATGGGTGACATCATGAAGACCTCTTCATTTGCTCTTACGGAAGCTAAGTATGTTGCTGGCGAAAACATCAAGCACATTGTCCTGGAGAATGTCCAAAATGCCTCTCTCAAAGTTCGATCCCGGCAAGAGAATATAGCTGGTGTGAAACTACCTAAGTTTGAGTATTTTACTGATGGTGAGACCAAGAATGATCTCACCGGTTTAGCGAGAGGTGGACAACAGGTCCAGCTCTGTCGAGCTGCCCATGTGAAAGCAATTGAGGTTCTGGTTGAGCTTGCTTCCCTTCAGACATCATTTTTGACTCTCGATGATGCTATAAAGACCACCAATCGAAGGGTTAATGCTCTTGAGAATGTTGTGAAGCCAAGATTGGAGAACACAATCAGTTACATTAAGGGCGAGCTAGATGAGCTCGAAAGGGAAGATTTCTTCAGACTAAAAAAGATACAGGGCTATAAGAAGAGGGAAATCGAGAGACAGCTTGCAGCCGCCAAGAACTTTGCAGAGGAGCAATTTGCAGAAAAGATATCATTGAAGAAGGGTATTTCCTTAAACTCAGCCCACAATATGTTGTCTTCAGCCATGGAGAAAGACGAGGATATTATCTTTTGA 786 43.77 MSGQSQRLNVVPTVTMLGVMKARLIGATRGHALLKKKSDALTVQFRQLLKKIVSTKESMGDIMKTSSFALTEAKYVAGENIKHIVLENVQNASLKVRSRQENIAGVKLPKFEYFTDGETKNDLTGLARGGQQVQLCRAAHVKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKNFAEEQFAEKISLKKGISLNSAHNMLSSAMEKDEDIIF 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16848793 16849578 - BLOR05591 Blo13g00310 68705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00310 261 Pfam ATP synthase subunit D 17 208 IPR002699 GO:0046961
Blo13g00310 261 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 212 IPR002699 GO:0046961
Blo13g00310 261 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 261 IPR002699 GO:0046961
Blo13g00310 261 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 261 - -
Blo13g00310 261 Coils Coil 179 199 - -
Blo13g00310 261 Gene3D - 1 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00310 Blo-Chr13:16848793 Blo04g01241 Blo-Chr4:24380341 0 wgd
Blo13g00310 Blo-Chr13:16848793 Blo04g01253 Blo-Chr4:24771584 1.59E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00310 K02149 - tcc:18612121 479.174