Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00311 ATGGGAGCTGATTTTGCTTCTTCAAAGCTGCTAAAGAGGCAGTATCTATGTTTCATTACATTTGTGATTTTCACTGCCTTTGGATTGGCTGCCTCTGCTAAGCTTCAACCAGATGAAGTGAAGGCATTGAGAAAGATAGGAAAGAAGCTGGGGAAGACTGACTGGGATTTTGGAAAAGATCCGTGCAGTATGGAAGGAAACTGGTATGTGTTAGATGGAAGAAAAGGATTCGAAAGCACCGTTGCCTGCGACTGTACCTTCGATCACAGCACCACCTGCCATGTCGTAAACATAGCCCTCAAGTCCCAAAATTTATCAGGCACGGTCCCGCAAGAATTTTCCAATCTTCGCCATCTTCAACGGCTAGACCTCAGCCGAAACTTACTGACTGGTTCTATTCCTTCCCAATGGGCCACAATGCGCTTGGTCGAGCTCTCCTTCATGGGCAACCGATTGTCTGGCCCATTTCCAAAAGCTCTCGCCAGTATCACCACCCTCAGAAACCTTAGCATTGAAGGAAACCGTTTCTCTGGGCCAATTCCACCGGAGATTGGAAAGTTGGTCAATCTACAGAAACTCACTTTATCTTCAAATGCTTTTACGGGTGCGTTACCTGCAGCACTGGCCAAACTGACCCACTTAAATGATATGAGAATAAGCAACAACTACTTCACTGGGAAAATACCCGAGTTTATCAGTAACTGGACAGTTGTAGAAAAACTGCATATCGAAGGTTGCCCACTGGAGGGCCCAATACCTTCAAGCATTTCCAACTTGAGGAGCTTAACTGATCTGAGGATATCAGATCTAAAAGGTGGAGAGTCTACTTTTCCACCATTGAATAACATGGAGTCGATGAAGACGCTGATACTTCGGCAATGCTCCATCACAGGAGAGATTCCTGAGTATGTGGGGGACATGGCTAAACTGAAAACCTTTGTCCACCCGTGCCTCAAAAGAGGCATTCCTTGTTCTGCTTCTGACCGTCAAGATCACTACTCCTTGCACATTAACTGTGGTGGTAAAGAAGCAATAATAGATGGGAAAAAGTATGAAGCTGATAGAGAACAAAGAGGGGCTTCAATGTTTTACTCTGGTCAGAACTGGGCATTTAGCAGCACCGGAAACTTCATGGACAATGATGTCGATACTGATAGCTATGTGAGAACCAACAATTCTGCACTTACCAATGTGTCCGAGCCCAATTCACAACTCTACTCAACAGCAAGAACTTCCCCCCTCTCGCTCACTTACTACGGACTCTGCCTCGTCAATGGCAATTACACTGTCAATCTTCACTTTGCAGAGATTATATTCATTAATGGCACTTCATTTTACAGCCTTGGAAAGAGAATATTTGATGTGTACATTCAGGACAAGCTGGTTCTAAAAGATTTCAATATAGAACTTGAGGCTGGTGGGACTGGTAAACCCATTATAAAAAACTTTACTGCTGCCGTCGCGAGTCATACGCTGAAGATCCATTTATACTGGACTGGAAAAGGAACGACGGGAATCCCATTGAGGGGAAATTATGGGCCCTTGATAGCAGCTATATCAGTTGATCCTAATTTCAAACCTCCAACATATGCGAAGAAGAATTATACCGCAGTAATTGTTGGGACAACGGGAGCCACATTGATGCTTTTTCTTTTGATCTTGGGTATTATGAGGTGGAAGGGTTGGCTTGGAGGCACAGTCTCTGCAGATAAAGAGCTTAAAGGCATGGACCTGCTGACAGGATTGTTTACTCTAAGACAGATAAAAGCAGCTACTAAGAATTTTGATGCAGAAAACAAGCTTGGGGAAGGTGGCTTTGGTGCAGTTTACAAAGGTCTTTTATCGGATGGAACTAAAATTGCAGTGAAACAGCTCGCTTCAAAATCGAAGCAAGGAAACCGTGAATTTGTGAATGAAATAGGCCTTATATCTGGACTGCAACATCCGAATCTTGTCAAGCTTTATGGGTGTTGTGTTGAAGGAAACCAGCTATTGCTGGTTTATGAGTTTATGGAAAACAATTGTCTATCGCATACTCTTTTCGGGAAGGGTGCAACATGCAGATTGAAACTGGATTGGGCTACCAGGAAGAAGATCTGTGTTGGCATTGCCAGAGGATTGGCCTATCTTCACGAGGAATCAAGACTGAAAATTGTACATCGAGATATCAAGACAAGTAATGTATTGCTTGACAAGGATTTTAATGCAAAAATTTCTGATTTTGGCTTGGCAAAGCTATATGAAGATGATAATACTCACATCAGCACCCGTGTCGCAGGAACCATAGGTTATATGGCACCGGAATATGCAATGAGAGGTTACTTGACGAACAAGGCCGACGTTTATAGCTTCGGAGTTGTTGCATTGGAAATTGTCAGTGGAAAAAGCAACACAAACTATAGGCCAAAGGAGGAGTTTGTTTACCTTCTTGATTGGGCATATGTATTGCAACAGAGAGGAGGTCTATTGGAGTTGGTGGATCCAATGCTGGGTTCAAATTATTCAGAAGAAGAGGCAATGGTGATGCTAAATGTAGGTCTTTTATGCACCAATGCCTCCCCAACACTGAGGCCGACCATGACTCAAGTGGTGAGCATGCTTGAAGGTCGAACTCCCGTTCAAGACTTGCTCGCTGATCCCGGCTTCTCGGCTGATCCCAAATACAAAGTCATAAGGAATCACTTCTGGCAGCAACTTGACGCTTCGAGTTTCAACTCCTTAAGCTCATACATTGAAACAGAAGTTACGGGCCATCTTATACGGGTCGGTTCAGTCAAGTCTGAAAATAGGAACACCGAACTGATAGCTTCATGA 2814 43.82 MGADFASSKLLKRQYLCFITFVIFTAFGLAASAKLQPDEVKALRKIGKKLGKTDWDFGKDPCSMEGNWYVLDGRKGFESTVACDCTFDHSTTCHVVNIALKSQNLSGTVPQEFSNLRHLQRLDLSRNLLTGSIPSQWATMRLVELSFMGNRLSGPFPKALASITTLRNLSIEGNRFSGPIPPEIGKLVNLQKLTLSSNAFTGALPAALAKLTHLNDMRISNNYFTGKIPEFISNWTVVEKLHIEGCPLEGPIPSSISNLRSLTDLRISDLKGGESTFPPLNNMESMKTLILRQCSITGEIPEYVGDMAKLKTFVHPCLKRGIPCSASDRQDHYSLHINCGGKEAIIDGKKYEADREQRGASMFYSGQNWAFSSTGNFMDNDVDTDSYVRTNNSALTNVSEPNSQLYSTARTSPLSLTYYGLCLVNGNYTVNLHFAEIIFINGTSFYSLGKRIFDVYIQDKLVLKDFNIELEAGGTGKPIIKNFTAAVASHTLKIHLYWTGKGTTGIPLRGNYGPLIAAISVDPNFKPPTYAKKNYTAVIVGTTGATLMLFLLILGIMRWKGWLGGTVSADKELKGMDLLTGLFTLRQIKAATKNFDAENKLGEGGFGAVYKGLLSDGTKIAVKQLASKSKQGNREFVNEIGLISGLQHPNLVKLYGCCVEGNQLLLVYEFMENNCLSHTLFGKGATCRLKLDWATRKKICVGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFNAKISDFGLAKLYEDDNTHISTRVAGTIGYMAPEYAMRGYLTNKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQQRGGLLELVDPMLGSNYSEEEAMVMLNVGLLCTNASPTLRPTMTQVVSMLEGRTPVQDLLADPGFSADPKYKVIRNHFWQQLDASSFNSLSSYIETEVTGHLIRVGSVKSENRNTELIAS 937
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17001392 17009212 - BLOR05592 Blo13g00311 68706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00311 937 SUPERFAMILY Protein kinase-like (PK-like) 579 887 IPR011009 -
Blo13g00311 937 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 309 899 - -
Blo13g00311 937 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 301 - -
Blo13g00311 937 Gene3D - 329 523 - -
Blo13g00311 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Blo13g00311 937 ProSiteProfiles Protein kinase domain profile. 595 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00311 937 Gene3D Ribonuclease Inhibitor 36 325 IPR032675 -
Blo13g00311 937 Pfam Malectin domain 334 519 IPR021720 -
Blo13g00311 937 Gene3D Phosphorylase Kinase; domain 1 567 670 - -
Blo13g00311 937 Pfam Leucine Rich Repeat 239 259 IPR001611 GO:0005515
Blo13g00311 937 SMART serkin_6 595 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00311 937 SUPERFAMILY L domain-like 68 313 - -
Blo13g00311 937 Gene3D Transferase(Phosphotransferase) domain 1 671 876 - -
Blo13g00311 937 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 309 899 - -
Blo13g00311 937 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 70 301 - -
Blo13g00311 937 Pfam Protein tyrosine and serine/threonine kinase 597 865 IPR001245 GO:0004672|GO:0006468
Blo13g00311 937 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Blo13g00311 937 CDD STKc_IRAK 601 869 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00982 Blo-Chr7:29321187 Blo13g00311 Blo-Chr13:17001392 9.47E-94 dispersed
Blo07g00985 Blo-Chr7:29371926 Blo13g00311 Blo-Chr13:17001392 2.41E-07 dispersed
Blo10g00722 Blo-Chr10:22865810 Blo13g00311 Blo-Chr13:17001392 0 dispersed
Blo10g00725 Blo-Chr10:22908239 Blo13g00311 Blo-Chr13:17001392 1.38E-08 dispersed
Blo13g00590 Blo-Chr13:28294650 Blo13g00311 Blo-Chr13:17001392 3.11E-43 dispersed
Blo13g00592 Blo-Chr13:28315664 Blo13g00311 Blo-Chr13:17001392 8.19E-87 dispersed
Blo13g00311 Blo-Chr13:17001392 Blo07g00981 Blo-Chr7:29286025 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84619 PF07714 PK_Tyr_Ser-Thr 3.40E-49 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00311 - - hbr:110640293 1136.71