Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00315 ATGTCGAATCAACAGAAGGATCCGTCCAATCAGTTCGATCCATTCCATTACAATTATCAAGAAACCAGTCGGCCATGCTTTCCCTTCTTCGACGAGACTCCATCCGTATTTTACAGTCAACCACCTCCCTCACAGAACCTTGAACAAGTGCTAGATCCTTCCTCCTACATGACCTTCGCTGACTCTTTGCGCACTTCTATGGATTATGACACCCTTTCAAGAGTCTTTGATTTGCCATGCTCCTCGTCGGAAATTATATCTCCGATCGATAATGGCCGGAAGAAGGCCAGCGGGGTTGAAGAGTCGGGGTGGAAGGTTGAGATCCCTTCGTCGCCGAATTCCTCCGTTTCTTCTTCGTCCAACGAGGGAGTTCGAGAAGAAGATTCGGGTAAGAAGGATGAGGATCGGGCAAAAGTTTGCGAAGATGAAGAAGAAGACAACTCCAAAAAAGTGAACAAGTCTAAGAAGAAAGAGAAACGCCAGAGAGAGCCAAGGTTTGCTTTTCTGACCAAGAGCGAGATCGATCACCTTGAAGATGGTTACAGATGGAGAAAATACGGACAGAAAGCTGTCAAGAACAGCCCCTACCCAAGAAGCTATTACAGATGCACAACCCAGAAATGCCAAGTGAAAAAGAGAGTGGAGAGGTCATTTCAGGATCCTTCTGTGGTGATAACAACCTACGAAGGGCAACATAATCACCAGTGTCCGGCGACCCTCCGTGGAAATGCGCCGGGAATGTTGTCCCCTTCCCTATTTGCGGCTGCAACGGCTTCTGGGTCTCCTTACCTTCCGCCGGATTTATTGTCTCAGCTTTTCCCAACAAATATTACCCAAGTTGATGCAGGTGCTTCCGTGCTCTATCAAAACATAAATCTTCACCACCACCATCTTCAGTTTCCTGACTATGGCTTACTGCAAGACTTAGTTCCGTCGCCATTCCCTCATAAGCAAGACCCATAA 963 47.35 MSNQQKDPSNQFDPFHYNYQETSRPCFPFFDETPSVFYSQPPPSQNLEQVLDPSSYMTFADSLRTSMDYDTLSRVFDLPCSSSEIISPIDNGRKKASGVEESGWKVEIPSSPNSSVSSSSNEGVREEDSGKKDEDRAKVCEDEEEDNSKKVNKSKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCQVKKRVERSFQDPSVVITTYEGQHNHQCPATLRGNAPGMLSPSLFAAATASGSPYLPPDLLSQLFPTNITQVDAGASVLYQNINLHHHHLQFPDYGLLQDLVPSPFPHKQDP 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17440261 17441663 + BLOR05596 Blo13g00315 68710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00315 320 MobiDBLite consensus disorder prediction 124 152 - -
Blo13g00315 320 Gene3D WRKY domain 162 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00315 320 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 313 IPR044810 GO:0003700
Blo13g00315 320 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00315 320 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 1 313 - -
Blo13g00315 320 SUPERFAMILY WRKY DNA-binding domain 170 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00315 320 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00315 320 MobiDBLite consensus disorder prediction 87 163 - -
Blo13g00315 320 Pfam WRKY DNA -binding domain 178 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00315 320 MobiDBLite consensus disorder prediction 107 123 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g01257 Blo13g00315 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01257 Blo-Chr4:25021327 Blo13g00315 Blo-Chr13:17440261 6.76E-165 dispersed
Blo07g00133 Blo-Chr7:1815711 Blo13g00315 Blo-Chr13:17440261 2.73E-45 dispersed
Blo13g00315 Blo-Chr13:17440261 Blo13g01025 Blo-Chr13:32591734 1.76E-14 dispersed
Blo13g00315 Blo-Chr13:17440261 Blo02g00473 Blo-Chr2:6768754 6.66E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13129 PF03106 WRKY 1.10E-25 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00315 - - zju:107416121 344.354