Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00317 ATGCCGTCATCCTCATCCGCATTGTCCGCAAGGTCGTCCGAAAGTCCATATTACACGGAAGTTCGGAAGCGTTGGCTTGTCCCCAAAGTCGTCCCAAGTCGGGGTGACATTCCAGGGGTGTGCACGGTCCAGTCCGGTCCGATTTTACAGCAGACCAGCACCGGATCGGTCGGTACCGGTACTGCATTTTTAAGACTGGTACTGGTCCCATGGAAGACTAGTACCGGACCGGTACCGGACTTGGTTTTCCGCTACGGTCCCGGTCCCGGTCCCGTACCGGGTGCCACTGCCATCACTCTGTACTCGGTATTCCCTCGATACCGGTTCTGTGGTATTGAGGACCGAGTACCGGTACCGAGAAAGTCGGTACTGAGGAGTGAGTACCGACTTTCGGGTAGGTTGGTATTTCTTAGTTGGGGCTGGAACCTAGAGGACCAAGTCAAGCTGGATTTCAGTTTGAAGAATAGATATGGCGTCTGGGAATTCTTTGAATTCAGAATTATCAAAGAAGACTTCTGTGGAAAATCTAGAAGAACTGTTGAAAAATTTTCTATTTCTCAAATACCAAATGTATCAAAGGATATCAAGGTTGACAGGGTTGGTACACAGTCTCAGCACGATCACCCTGAAAGTTTATTCCTTTCGATCCATGAGAAATCGGGTGATAAGAGCTCAGAGAAGATGATAGCTCATTTGGGCATGAGCAAATCAAGCGATATAGATAATATCAGCCAAAGCAGCTCGATTTACCATCAGGAAAGGGGCGGCAGTTCTCAGTCTGGGGAAGATGGAAGTTCTGGAACAGTTAGGAAACAACCTTCGCAATCATATGGAGGACATGGATTTGTGCCACCCTCTCCTCTGGTTGGGTTGCCAGAAATTTCGCATCTTGGGTGGGGCCATTGGTTCACTCTTAGGGATCTGGACTTTGCTACTAATCGATTTTCTGCAGAAAATGTGCTTGGTGAGGGTGGTTATGGAGTTGTGTACAGAGGCAGACTGGTTAATGGAACTGAGGTTGCAGTGAAAAAGCTTTTCAATAACTTGGGACAGGCAGAGAGAGAATTTAGAGTGGAAGTTGAGGCCATTGGCCATGTGCGCCACAAGAATCTGGTGCGGCTATTAGGTTATTGCATAGAAGGAGTTCATAGGATGCTGGTATATGAATATGTGAACAATGGCAACTTGGAACAATGGCTGCATGGGGCAATGCGGGTCCATGGCTCCCTTACTTGGGAAGCACGGATGAAGGTGCTTCTTGGTACCGCTAAGGCACTTGCTTATTTGCACGAAGCAATTGAACCCAAAGTGGTTCATAGAGACATAAAGTCAAGCAATATCTTGATCGATGATGAATTCAATGCCAAAGTTTCCGATTTTGGATTGGCCAAGCTTTTAGACGCAGGAGAGAGTCACATCACAACTCGAGTGATGGGAACATTCGGTTACGTGGCACCTGAATATGCTAACACGGGCTTGTTAAACGAGAAAAGTGACATCTATAGCTTTGGCGTTCTCCTTCTCGAAACAGTGACTGGAAGGGACCCTGTCGACTATGGCCGTCCTGCTAACGAGGTTAATCTTGTAGAGTGGCTTAAGGTGATGGTGGGAACAAGAAGAGCAGAGGAAGTTGCAGATCAAAATCTTGAAGTTAAGCCCACAATTCAGGCATTAAAACGGGCCCTTCTTGCTGCACTTAGATGTGTCGATCCCGAGGCAGACAAGAGACCGAAAATGAGTCAAGTTGTAAGGATGCTAGAAGCCGATGAATTCCCATTCCGTGAGGATCGAAGGAACCGTAAGAGCCGAACTGCAAGCATGGAAATCGAGTCCATGAAGGAAGCTCCGTCTTGTTCAGCAGATAATGAAAAAAAGGGCGGGGAGTCTGAGATCCAAACCTCCCCGACAGCTAATGGATAG 1920 47.6 MPSSSSALSARSSESPYYTEVRKRWLVPKVVPSRGDIPGVCTVQSGPILQQTSTGSVGTGTAFLRLVLVPWKTSTGPVPDLVFRYGPGPGPVPGATAITLYSVFPRYRFCGIEDRVPVPRKSVLRSEYRLSGRLVFLSWGWNLEDQVKLDFSLKNRYGVWEFFEFRIIKEDFCGKSRRTVEKFSISQIPNVSKDIKVDRVGTQSQHDHPESLFLSIHEKSGDKSSEKMIAHLGMSKSSDIDNISQSSSIYHQERGGSSQSGEDGSSGTVRKQPSQSYGGHGFVPPSPLVGLPEISHLGWGHWFTLRDLDFATNRFSAENVLGEGGYGVVYRGRLVNGTEVAVKKLFNNLGQAEREFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRVHGSLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDAGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLETVTGRDPVDYGRPANEVNLVEWLKVMVGTRRAEEVADQNLEVKPTIQALKRALLAALRCVDPEADKRPKMSQVVRMLEADEFPFREDRRNRKSRTASMEIESMKEAPSCSADNEKKGGESEIQTSPTANG 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17672188 17682241 - BLOR05598 Blo13g00317 68712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00317 639 SMART serkin_6 315 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00317 639 Gene3D Phosphorylase Kinase; domain 1 297 390 - -
Blo13g00317 639 PANTHER OS10G0497600 PROTEIN 174 633 - -
Blo13g00317 639 PANTHER OS01G0323000 PROTEIN 174 633 - -
Blo13g00317 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Blo13g00317 639 CDD STKc_IRAK 321 587 - -
Blo13g00317 639 ProSiteProfiles Protein kinase domain profile. 315 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00317 639 MobiDBLite consensus disorder prediction 593 639 - -
Blo13g00317 639 ProSitePatterns Protein kinases ATP-binding region signature. 321 344 IPR017441 GO:0005524
Blo13g00317 639 Pfam Protein kinase domain 317 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00317 639 Gene3D Transferase(Phosphotransferase) domain 1 391 604 - -
Blo13g00317 639 MobiDBLite consensus disorder prediction 593 608 - -
Blo13g00317 639 MobiDBLite consensus disorder prediction 248 275 - -
Blo13g00317 639 MobiDBLite consensus disorder prediction 248 282 - -
Blo13g00317 639 SUPERFAMILY Protein kinase-like (PK-like) 299 588 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00317 Blo-Chr13:17672188 Blo17g00692 Blo-Chr17:18529350 0 dispersed
Blo13g00317 Blo-Chr13:17672188 Blo04g01249 Blo-Chr4:24551720 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84620 PF00069 Pkinase 8.70E-47 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00317 - - tcc:18612176 766.533