Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00321 ATGGCAGAAGCCATTTTCCTTCCTCGGGATGAAATCGAAGAGAGGGAGAGGGGGAGAGCCGACGACGGCGATGGACGAGAGGCAGACGGCGAACGACGGCGAGCGCTCGGACGACGGCGAGCTCAGACGTCGGGATGCGGTGTCCAGCGTCCTGCTATGACGACGGCGTGCGAACGAGCAAGCGACGGGATCGGAGCTTTTGCCGCGGCGACTTCTGGCGACGATATTGCGGTGAAGTTCACAGCCGAGGAGCTTCGCAAAATTATGGACTTGAAACACAACATTCGTAATATGTCTGTCATTGCACATGTTGATCATGGAAAGTCAACCCTTACCGATTCACTTGTTGCGGCTGCTGGTATCATTGCGCAGGAGGTTGCTGGGGATGTTCGGATGACAGATACTCGTGCTGATGAAGCAGAACGCGGTATCACTATTAAGTCCACTGGAATTTCATTATACTATGAAATGTCAGATGACTCTTTGAAGAATTACAAGGGAGAGCGAGTTGGAAATGAGTATCTCATAAATCTTATTGATTCTCCTGGACATGTTGACTTCTCCTCTGAGGTCACTGCTGCTCTCCGTATCACTGATGGTGCCCTGGTGGTGGTAGATTGCATTGAAGGCGTTTGCGTCCAAACAGAAACTGTCCTCCGCCAGGCTCTTGGAGAGAGAATTAGGCCTGTTTTGACAGTTAACAAGATGGACAGGTGCTTCCTTGAACTTCAGGTTGATGGAGAAGAAGCTTATCAAACATTCCAAAGGGTCATTGAGAATGCAAATGTCATCATGGCCACATATGAGGATCCTCTTCTTGGTGATGTGCAGGTCTATCCTGAGAAAGGAACGGTGGCATTCTCTGCTGGTTTACATGGTTGGGCTTTCACGCTGACCAACTTTGCAAAAATGTATGCCTCCAAATTTGGGGTTGATGAGGCAAAGATGATGGATAGGCTTTGGGGTGAAAATTTCTTTGATCCTGCCACTAAAAAATGGACCACCAAAAATACAGGTTCTGGGACATGCAAGCGCGGATTTGTTCAGTTTTGTTATGAGCCCATCAAGCAAATTATTGCCACTTGCATGAACGACCAGAAGGATAAGCTTTGGCCTATGTTGAAAAAGTTGGGTGTGACTATGAAGTCTGATGAGAAGGATTTGATGGGCAAGGCGTTGATGAAACGAGTCATGCAAACTTGGCTCCCAGCTAGCACAGCTCTCTTGGAAATGATGATCTTTCATCTTCCTTCTCCATCAAAGGCCCAGAAGTATCGTGTTGAGAATTTGTACGAGGGCCCCCTTGATGACCAATATGCTACCGCAATTAGAAACTGTGACCCTGATGGACCACTGATGCTCTACGTGTCAAAGATGATTCCTGCATCTGATAAGGGTCGGTTCTTTGCTTTTGGCCGTGTTTTCTCTGGTAAAGTTGCCACTGGTATGAAAGTGAGGATTATGGGGCCTAACTACGTTCCTGGTGAGAAAAAGGACTTGTATGTTAAAAGTGTTCAGAGAACTGTCATTTGGATGGGAAAGAGGCAAGAAACCGTTGAGGATGTTCCTTGCGGGAACACGGTGGCCATGGTTGGGCTCGATCAGTTTATTACCAAAAATGCCACTTTGACAAATGAGAAGGAAGTTGATGCACACCCAATCCGAGCAATGAAATTTTCAGTTTCACCAGTTGTACGAGTGGCTGTTCAGTGCAAGGTGGCATCTGACCTCCCCAAGCTTGTTGAAGGTCTAAAACGTTTGGCAAAGTCGGATCCTATGGTTGTTTGTTCAATGGAAGAGTCTGGAGAGCACATCATTGCTGGGGCTGGAGAATTGCACCTTGAAATCTGTTTGAAGGATTTGCAGGATGACTTCATGGGCGGTGCTGAAATTGTGAAATCTGATCCTGTGGTTTCCTTCCGTGAGACGGTTCTTGAGAAGTCTTGTCGAACAGTCATGAGTAAGTCGCCCAATAAACATAACCGACTGTACATGGAAGCTCGTCCAATGGAAGATGGTCTTGCTGAGGCAATTGATGATGGTCGCATCGGCCCAAGAGATGACCCAAAAGTGCGCTCAAAAATTTTGGCGGAGGAGTTCGGTTGGGACAAGGATCTTGCCAAAAAGATATGGTGTTTTGGCCCTGAAACAACTGGGCCCAATATGGTTGTGGATATGTGTAAGGGAGTTCAGTATCTCAATGAAATCAAGGATTCCGTCGTTGCTGGATTCCAGTGGGCATCAAAAGAAGGTGCCTTGTGTGAAGAAAACATGAGGGGCATATGTTTTGAAGTTTGCGATGTGGTTCTGCACGCCGACGCAATCCACAGAGGAGGTGGTCAAGTTATCCCTACTGCAAGGAGGGTCATCTATGCTTCCCAACTGACAGCCAAGCCCCGACTTCTCGAGCCAGTGTACTTGGTGGAGATCCAAGCACCTGAGCAGGCACTGGGAGGTATTTATAGCGTTCTTAACCAGAAACGTGGGCACGTGTTTGAAGAAATGCAGAGGCCTGGTACCCCGCTCTATAACATCAAGGCCTACCTACCTGTGGTCGAGTCCTTTGGTTTCTCGGGCACTCTGCGGGCTGCCACCTCTGGCCAGGCGTTTCCGCAGTGTGTGTTTGATCACTGGGACATGATGTCGTCAGACCCGTTGGAATCTGGAACCCAGGCTGCCAATCTTGTTGTTGAAATCCGAAAGAGGAAGGGCTTGAAGGAGCAGATGACACCACTCACAGATTTCGAGGACAAGCTATAA 2760 48.15 MAEAIFLPRDEIEERERGRADDGDGREADGERRRALGRRRAQTSGCGVQRPAMTTACERASDGIGAFAAATSGDDIAVKFTAEELRKIMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDDSLKNYKGERVGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMDRLWGENFFDPATKKWTTKNTGSGTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKKLGVTMKSDEKDLMGKALMKRVMQTWLPASTALLEMMIFHLPSPSKAQKYRVENLYEGPLDDQYATAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGMKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIVKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGRIGPRDDPKVRSKILAEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALCEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLESGTQAANLVVEIRKRKGLKEQMTPLTDFEDKL 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18130516 18138163 - BLOR05602 Blo13g00321 68716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00321 919 SUPERFAMILY Translation proteins 419 552 IPR009000 -
Blo13g00321 919 SMART EFG_C_a 800 889 IPR000640 -
Blo13g00321 919 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 78 918 - -
Blo13g00321 919 SUPERFAMILY EF-G C-terminal domain-like 803 910 IPR035647 -
Blo13g00321 919 MobiDBLite consensus disorder prediction 1 48 - -
Blo13g00321 919 CDD eEF2_snRNP_like_C 803 881 - -
Blo13g00321 919 MobiDBLite consensus disorder prediction 1 38 - -
Blo13g00321 919 Pfam Elongation Factor G, domain III 563 625 IPR041095 -
Blo13g00321 919 Gene3D Elongation Factor G (Translational Gtpase), domain 3 562 639 - -
Blo13g00321 919 Gene3D - 79 313 IPR027417 -
Blo13g00321 919 Pfam Elongation factor Tu GTP binding domain 93 418 IPR000795 GO:0003924|GO:0005525
Blo13g00321 919 Gene3D - 645 798 IPR014721 -
Blo13g00321 919 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 93 420 IPR000795 GO:0003924|GO:0005525
Blo13g00321 919 PRINTS GTP-binding elongation factor signature 97 110 IPR000795 GO:0003924|GO:0005525
Blo13g00321 919 PRINTS GTP-binding elongation factor signature 193 204 IPR000795 GO:0003924|GO:0005525
Blo13g00321 919 PRINTS GTP-binding elongation factor signature 177 187 IPR000795 GO:0003924|GO:0005525
Blo13g00321 919 PRINTS GTP-binding elongation factor signature 229 238 IPR000795 GO:0003924|GO:0005525
Blo13g00321 919 PRINTS GTP-binding elongation factor signature 141 149 IPR000795 GO:0003924|GO:0005525
Blo13g00321 919 TIGRFAM small_GTP: small GTP-binding protein domain 96 252 IPR005225 GO:0005525
Blo13g00321 919 Gene3D - 799 919 - -
Blo13g00321 919 Gene3D Translation factors 419 560 - -
Blo13g00321 919 SUPERFAMILY Ribosomal protein S5 domain 2-like 638 802 IPR020568 -
Blo13g00321 919 Pfam Elongation factor G, domain IV 687 798 IPR005517 GO:0005525
Blo13g00321 919 CDD EF2_II 451 546 - -
Blo13g00321 919 CDD aeEF2_snRNP_like_IV 635 807 - -
Blo13g00321 919 CDD EF2 96 306 - -
Blo13g00321 919 Pfam Elongation factor Tu domain 2 470 543 IPR004161 GO:0005525
Blo13g00321 919 SMART EFG_IV_2 682 798 IPR005517 GO:0005525
Blo13g00321 919 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 134 149 IPR031157 -
Blo13g00321 919 PANTHER - 78 918 - -
Blo13g00321 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 417 IPR027417 -
Blo13g00321 919 Pfam Elongation factor G C-terminus 800 887 IPR000640 -
Blo13g00321 919 SUPERFAMILY EF-G C-terminal domain-like 560 636 IPR035647 -
Blo13g00321 919 CDD EF2_snRNP_III 563 635 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00592 Blo-Chr1:6532856 Blo13g00321 Blo-Chr13:18130516 0 dispersed
Blo11g00689 Blo-Chr11:7986130 Blo13g00321 Blo-Chr13:18130516 2.67E-22 dispersed
Blo13g00321 Blo-Chr13:18130516 Blo05g00516 Blo-Chr5:9268709 1.56E-19 dispersed
Blo03g00921 Blo-Chr3:35220131 Blo13g00321 Blo-Chr13:18130516 6.73E-137 transposed
Blo04g00650 Blo-Chr4:5687685 Blo13g00321 Blo-Chr13:18130516 7.68E-21 transposed
Blo07g01250 Blo-Chr7:32648122 Blo13g00321 Blo-Chr13:18130516 6.12E-22 transposed
Blo02g01057 Blo-Chr2:40792272 Blo13g00321 Blo-Chr13:18130516 5.64E-43 transposed
Blo13g00321 Blo-Chr13:18130516 Blo04g01262 Blo-Chr4:25545836 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00321 K03234 - csv:101208886 1634.77