Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00325 ATGGACACAAAAACAGAAGATTGTTCAGAATCGTCTCTGGCTAACACCTCTGGTGTCATACCATCTGAAGCACAGCATACTACTGCTGAATCTGAGAATTTGAAACGCGACTTACCATCTGGGCTATCTCCTACTGGCATATCTTCTTGGGCAAAAAATTTGAAGATTTCTCAGCCTTTCGTTGGAACACAAGATGGCTCTCCTAATGCAAATGCAGGAAAGTCGAGTTTTTCACGTTTCACCAGTGGCATTGGTTTGCAGTTGTCCCCAAAAGATCCTTCTCCAGATGCCTCTGAAAAAACTTCAAAAATTCCAGAACCTGGTTTATTTGGGTCACTCACAAAAGGTTTTGTTGACTCTTCTAGAAATGCTATGAAGGCTGTACAGGCCAAAGCTAGGCATGCTGTCTCTCAAAATAAACGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACATATATCACAGAGAACATAATTGCTATGGGATTCCCGGCTGGTGATATGAGTTCAGGTTTTTTTGGATATGTTGAGGGTTTCTACCGGAACCACATGGAAGAAGTTATAAAGTTCTTTGAAACTCATCACAAGGACAAATACAAAGTGTACAATCTTTGTTCTGAGAGACTGTACGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGATCATAATTGTCCCCCAACTCGATTGATAATATCATTTTGTCAAAGTGCATACTCATGGCTGAAAGAAGATATTGAAAATGTAGTGGTTGTGCACTGCAAAGCAGGAATGGCTAGGACAGGGTTGATGATATCTAGTCTTCTTTTATACTTGAAGTTTTTCCCAACTGCCGAGGAGTCCATTGACTACTACAACCAAAAAAGGTGCTTTGATGGCAAGGGCCTTATTCTTCCAAGTCAGATTAGATATGTCAAATATTTCGAGCGAATATTAACATACTTTAATGGCGAAAATCCTCCTGGCCGTAGGTGCATGCTTAGGGGATTTCGGCTTCATAGATGTCCTTATTGGATCAGGCCCTCTATCACTGTGTCTGATCATAATGGTGTTCTTTTCTCCTCCAAAAAACATCCAAGAACCAAAGATCTCTCCCCAGAAGATTTTTGGTTCAGTGCACCAAAGAAGGGGGTAATGGTATTTGCTTTGCCTGGGGAACCTGGTCTAACGGAGTTGGTGGGGGACTTCAAGATCCACTTCCATGATCGCCAAGGAGATTTCTACTGTTGGCTCAACACAACTATGACTGAAAACCGCAAAGTTCTCAGCACTAACGATCTTGATGGGTTTGACAAGAGAAAACTGCCTTCTCCAGGATTTCAGGTTGAGGTTGTTTTGGTGGATTATTATGGTAGCATTCCCCCAACACCTAATACTACAAATAACACAAAGAACTCCGATGAAAGATCTAGTTCAACTCCTGCTCCAATTGATGTCGGTGCAGCTCCTCCAAAACCTATGGAAAATCCTGTGAGTGAGGACAAAGATGATGTGTTTTCAGACGGTGAAGCCAATGAAGGTGGTTCTTCAAAGTCCAAGCAAGGCTTAAGCTCTACCTCTAATTCTGCGATTACGGCTCAAGATCAAGTTGTGAATTTAACACGGGCAGCAGAGGAAGTTTCTTTGCGAGACAATATGTCGAATCGAATTGAAACCTCTGGGGTGCCCAAAAGTGATGTCGGGAGAGATGGTTCAGTCCAAGAAGCGCCAACCCCTGAAAGTGAGTTCAAAGCTATGGCTGCTGATGCCTCTGTTTTCACATTTGGCGATGATGAGGATTATGAGAGTGATTAG 1809 42.29 MDTKTEDCSESSLANTSGVIPSEAQHTTAESENLKRDLPSGLSPTGISSWAKNLKISQPFVGTQDGSPNANAGKSSFSRFTSGIGLQLSPKDPSPDASEKTSKIPEPGLFGSLTKGFVDSSRNAMKAVQAKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPTRLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESIDYYNQKRCFDGKGLILPSQIRYVKYFERILTYFNGENPPGRRCMLRGFRLHRCPYWIRPSITVSDHNGVLFSSKKHPRTKDLSPEDFWFSAPKKGVMVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMTENRKVLSTNDLDGFDKRKLPSPGFQVEVVLVDYYGSIPPTPNTTNNTKNSDERSSSTPAPIDVGAAPPKPMENPVSEDKDDVFSDGEANEGGSSKSKQGLSSTSNSAITAQDQVVNLTRAAEEVSLRDNMSNRIETSGVPKSDVGRDGSVQEAPTPESEFKAMAADASVFTFGDDEDYESD 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18585588 18600371 - BLOR05606 Blo13g00325 68720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00325 602 CDD PTP_PTEN 151 316 IPR045101 GO:0016791
Blo13g00325 602 ProSitePatterns Tyrosine specific protein phosphatases active site. 257 267 IPR016130 GO:0016311|GO:0016791
Blo13g00325 602 Gene3D Protein tyrosine phosphatase superfamily 126 323 IPR029021 -
Blo13g00325 602 MobiDBLite consensus disorder prediction 83 108 - -
Blo13g00325 602 MobiDBLite consensus disorder prediction 1 47 - -
Blo13g00325 602 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 21 602 - -
Blo13g00325 602 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 21 602 - -
Blo13g00325 602 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 234 294 IPR000387 GO:0016311|GO:0016791
Blo13g00325 602 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 154 321 IPR029021 -
Blo13g00325 602 MobiDBLite consensus disorder prediction 460 478 - -
Blo13g00325 602 ProSiteProfiles Phosphatase tensin-type domain profile. 141 320 IPR029023 -
Blo13g00325 602 MobiDBLite consensus disorder prediction 547 602 - -
Blo13g00325 602 MobiDBLite consensus disorder prediction 460 528 - -
Blo13g00325 602 SMART PTEN_C2_2 325 453 IPR014020 -
Blo13g00325 602 MobiDBLite consensus disorder prediction 510 528 - -
Blo13g00325 602 MobiDBLite consensus disorder prediction 8 28 - -
Blo13g00325 602 ProSiteProfiles C2 tensin-type domain profile. 327 454 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00279 Blo-Chr6:15505319 Blo13g00325 Blo-Chr13:18585588 0 transposed
Blo17g00378 Blo-Chr17:4194493 Blo13g00325 Blo-Chr13:18585588 1.43E-48 transposed
Blo13g00325 Blo-Chr13:18585588 Blo04g01266 Blo-Chr4:25890548 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00325 K01110 - jre:108999238 894.804