Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00343 ATGGGGATGAAGAGCGCTGTAGGAGAGATTGTTGAAGTCGATGGTGGTCATATCGTCCGTTCCACTGGCCGGAAAGACCGACACAGCAAGGTCTACACAGCGAAAGGCCCTCGCGACCGTCGTGTCCGCCTTTCAGCCCACACCGCAATTCAGTTCTACGACGTTCAAGATCGCTTAGGCTACGATCGACCCAGCAAAGCAGTCGATTGGCTTATAAAAAAGGCCAAGTCCGCTATTGACAAGCTGGCAGAGTTACCGCCTTGCTATGCCACCATCGCTGCAGATGCCGACACGAATAATGGCGGTAACGAGATGGTAATTTCTGCAGATCAATCGGAGTCATCCGGATACAATTTCCACCTCCAAAGGCATTTGGCTGAGAATCCAGAAAATAATAATTCGGGTTTCGTTCCTCCTCCGCTGTCTTCAGTTGCCCTAACAGACAGTATGAAAACCTTCTTTCCCACAAGCTCTGGGACGGCCCCCATCAATTTCCAGACCTTCCCACCTGATATACTTTCAAGAACCGCAAACCCCACTCAAGATCTTGGCCTTTCTCTCCATTCTTTTCAAGATCCTGGCTTGATTCACTCTCAGGGAGAGCCAAACCACTCGCCACAGACCGATCAAAACCTTTTCTCCGGCTCGCATCAGGTAGGGTATGAACCAAATTACCAGATAATGGCAGCTTGGGCAAACGATAGAGGCGCAGAACATGGAAGTGGGTTTGTTTTCAGCTCGCTGCCAATTTTTAGCCAGGGCGGCTCTGCTGCAGTCTCACAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCTGTGTCATTTCGCGGTTGGAACGATCTTTCAATTGCTGTATCCAAAGACCAGAAGACTCATTCACTTCACCAATCTTCGTTATTTGGTACTCGTTTCGTTGCTGATGGACAGATTCCGGCCGACGATGACAGCGGTATGGTTTCAGAAAGATTGTCGTCTTCTTCTATGAACTCCCACCATCAAGTCGGCCACAACTGA 1014 49.8 MGMKSAVGEIVEVDGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPCYATIAADADTNNGGNEMVISADQSESSGYNFHLQRHLAENPENNNSGFVPPPLSSVALTDSMKTFFPTSSGTAPINFQTFPPDILSRTANPTQDLGLSLHSFQDPGLIHSQGEPNHSPQTDQNLFSGSHQVGYEPNYQIMAAWANDRGAEHGSGFVFSSLPIFSQGGSAAVSQRGPLQSSYSPSVSFRGWNDLSIAVSKDQKTHSLHQSSLFGTRFVADGQIPADDDSGMVSERLSSSSMNSHHQVGHN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19861562 19862575 - BLOR05624 Blo13g00343 68738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00343 337 Pfam TCP family transcription factor 23 113 IPR017887 -
Blo13g00343 337 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 332 IPR005333 GO:0003700
Blo13g00343 337 MobiDBLite consensus disorder prediction 311 337 - -
Blo13g00343 337 PANTHER TRANSCRIPTION FACTOR TCP4 2 332 - -
Blo13g00343 337 MobiDBLite consensus disorder prediction 319 337 - -
Blo13g00343 337 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00343 Blo-Chr13:19861562 Blo14g00746 Blo-Chr14:21001018 1.79E-25 dispersed
Blo13g00343 Blo-Chr13:19861562 Blo13g00346 Blo-Chr13:20322285 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13132 PF03634 TCP 1.00E-31 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00343 - - gmx:100796390 387.111