Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00346 ATGGGGATGAAGAGCGCTGTAGGAGAGATTGTTGAAGTCGATGGTGGTCATATCGTCCGTTCCACTGGCCGGAAAGACCGACACAGCAAGGTCTACACAGCGAAAGGCCCTCGCGACCGTCGTGTCCGCCTTTCAGCCCACACCGCAATTCAGTTCTACGACGTTCAAGATCGCTTAGGCTACGATCGACCCAGCAAAGCAGTCGATTGGCTTATAAAAAAGGCCAAGTCCGCTATTGACAAGCTCGCAGAGTTACCGCCTTGCTATGCCACCATCGCTGCAGATGCCGACACGAATAATGGCGGTAACGAGATGGTAATTTCTGCAGATCAATCGGAGTCATCTGGATACAATTTCCACCTCCAAAGGCATTTGGCTGAGAATCCAGAAAATAATAATCCGGGTTTCATTTCTCCTCCGCTGTCTTCAGTTGCCCTAACAGACAGTATGAAAACCTTCTTTCCCACAAGCTCTGGGACGGCCCCCATCAATTTCCAGACCTTCCCACCTGATATACTTTCAAGAACCGCAAACCCCACTCAAGATCTTGGCCTTTCTCTCCATTCTTTTCAAGATCCTGGCTTGATTCACTCTCAGGGCGAGCCAAACCACTCGCCGCAGACCGATCAAAACCTTTTCTCCGGCTCGCATCAGGTAGTTTATGAACCAAATTACCAGGTAACGGCAGCTTGGGGAAACGATAGAAGCGCAGAACATGGAAGTGGGTTTGTTTTCAGCTCGCTGCCACTTTTTGGCCAGTGTAGCTCAGCTGCATTCTCACAAAGGGGACCCCTTCAGTCCAGTTACTCACCTTCTGTGTCATTTCGCGGTTGGAACGATCTTTCAATGGCTGTATCCAAAGACCAGAAGACTCATTCACTTCACCAATCTTCGTTATTTGGTACTCGTTTCGTTTCTGATGGGCTACATGGCTTTTGCATTCCCGGACAGATTCCGGCCGACGATGACAGCAGTATGGTTTCAGAAAGATTGTCGTCTTCTTCTATGAATTCCCACCATTAA 1023 49.07 MGMKSAVGEIVEVDGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPCYATIAADADTNNGGNEMVISADQSESSGYNFHLQRHLAENPENNNPGFISPPLSSVALTDSMKTFFPTSSGTAPINFQTFPPDILSRTANPTQDLGLSLHSFQDPGLIHSQGEPNHSPQTDQNLFSGSHQVVYEPNYQVTAAWGNDRSAEHGSGFVFSSLPLFGQCSSAAFSQRGPLQSSYSPSVSFRGWNDLSMAVSKDQKTHSLHQSSLFGTRFVSDGLHGFCIPGQIPADDDSSMVSERLSSSSMNSHH 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 20322285 20323307 + BLOR05627 Blo13g00346 68741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00346 340 Pfam TCP family transcription factor 23 109 IPR017887 -
Blo13g00346 340 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Blo13g00346 340 PANTHER TRANSCRIPTION FACTOR TCP4 2 340 - -
Blo13g00346 340 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 340 IPR005333 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00961 Blo-Chr7:28969838 Blo13g00346 Blo-Chr13:20322285 3.95E-74 dispersed
Blo10g00746 Blo-Chr10:23498369 Blo13g00346 Blo-Chr13:20322285 6.18E-68 dispersed
Blo13g00346 Blo-Chr13:20322285 Blo14g00746 Blo-Chr14:21001018 1.98E-25 dispersed
Blo13g00343 Blo-Chr13:19861562 Blo13g00346 Blo-Chr13:20322285 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13133 PF03634 TCP 1.30E-31 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00346 - - gmx:100796390 389.423