Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00350 ATGGAAGGAGACGACGAGTACAGAAGGAAAGAACGGGTCGCATTGGTGGCTATCGTTGTTCTAGCTTCACTTGCCCTTGCTTCGCTGCTCGTTGCCTTCAGCTATTACTGCTACATTAGCAATAAGGTTTCCAAACGTCTTAGGGCCCAGAAAAGGAATAACAATGAAAATAAAGGTGGTTTTGAAAATCTTAAAGTGGTTGTCGAGGGAAGTCCCCAGGTTTTCACCTTTAAGCAGCTGCACTCAGCAACTGGTGGTTTCAGCAAGTCAAATGTGGTTGGACATGGGGGGTTTGGCTCAGTTTACAGAGGAGTCCTGGGCGATGGGAGGAAAGTTGCAATTAAGCTGATGGATCAGCCGGGAAAACAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGCTCAGTCGGCTTCATTCTCCATATTTACTTGCACTGCTCGGGCACTGCTCCGATAACAATCATAAACTTCTCGTCTATGAATTCATGGCGAATGGAGGACTTCAGGAGCATCTTTATCCCATTCCCAATTCGAATGCAGCCTCCCTGAAACTGGACTGGGAAACCCGGTTGAGAATAGCTCTTGAAGCTGCAAAAGGATTGGAGTATCTTCACGAACATGTAAATCCGCCAGTTATTCACAGAGATTTCAAAAGCAGCAACATCCTCTTGGATAGATACTTCCACGCCAAAGTATCAGATTTTGGACTTGCGAAGATTGGGTCTGACAAAGTTGGAGGACATGTTTCGACCCGAGTTTTAGGCACACAGGGATATGTCGCTCCTGAGTATGCACTAACCGGGCATTTGACGACGAAGTCTGATGTGTATAGTTTTGGGGTCGTTCTATTGGAGTTGCTCACAGGAAGAGTTCCTGTCGATATGAAACGGCCTCCAGGAGAAGCTACTCTGGTTTCTTGGGCTTTGCCGAGGCTGACCGACAGAGAGAAAGTAGCGGAGATTATGGATCCCACGATGGAGGGTCAGTACACAATGAAGGACGTGATTCAGGTGGCAGCCATTGCTGCAATGTGTGTTCAACCAGAGGCAGATTATAGGCCACTGATGGCTGATGTTGTCCATTCTCTTGTTCCGCTTGTCAAAAACAACCGAACAACCTCGAAGAGCAACAATGCTGCCGATTTTGTCGCCATGAAGTCGCCTGGCCCTCTGGATGTCGGAAAAGCGAGTGGAAGACTAACTATATCGAAACATAGCCAATCTCCACTGGCAGAAGAAGTTTGA 1245 47.23 MEGDDEYRRKERVALVAIVVLASLALASLLVAFSYYCYISNKVSKRLRAQKRNNNENKGGFENLKVVVEGSPQVFTFKQLHSATGGFSKSNVVGHGGFGSVYRGVLGDGRKVAIKLMDQPGKQGEDEFKVEVELLSRLHSPYLLALLGHCSDNNHKLLVYEFMANGGLQEHLYPIPNSNAASLKLDWETRLRIALEAAKGLEYLHEHVNPPVIHRDFKSSNILLDRYFHAKVSDFGLAKIGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSFGVVLLELLTGRVPVDMKRPPGEATLVSWALPRLTDREKVAEIMDPTMEGQYTMKDVIQVAAIAAMCVQPEADYRPLMADVVHSLVPLVKNNRTTSKSNNAADFVAMKSPGPLDVGKASGRLTISKHSQSPLAEEV 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 20616616 20619309 + BLOR05631 Blo13g00350 68745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00350 414 Gene3D Transferase(Phosphotransferase) domain 1 163 387 - -
Blo13g00350 414 SUPERFAMILY Protein kinase-like (PK-like) 68 363 IPR011009 -
Blo13g00350 414 Gene3D Phosphorylase Kinase; domain 1 44 162 - -
Blo13g00350 414 MobiDBLite consensus disorder prediction 395 414 - -
Blo13g00350 414 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00350 414 PANTHER OS07G0227300 PROTEIN 2 394 - -
Blo13g00350 414 PANTHER OS01G0750732 PROTEIN 2 394 - -
Blo13g00350 414 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Blo13g00350 414 CDD STKc_IRAK 93 366 - -
Blo13g00350 414 Pfam Protein tyrosine and serine/threonine kinase 90 363 IPR001245 GO:0004672|GO:0006468
Blo13g00350 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00152 Blo-Chr5:1392783 Blo13g00350 Blo-Chr13:20616616 2.71E-85 dispersed
Blo13g00350 Blo-Chr13:20616616 Blo12g00288 Blo-Chr12:17085939 4.39E-110 dispersed
Blo18g00603 Blo-Chr18:9460226 Blo13g00350 Blo-Chr13:20616616 3.40E-94 dispersed
Blo13g00350 Blo-Chr13:20616616 Blo17g00623 Blo-Chr17:13656037 1.83E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84621 PF00069 Pkinase 3.20E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00350 - - zju:107435023 639.802