Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00356 ATGAAGGCAAAGCGAGACCGAGAACGAGCAGGTGTCGACGACGAGGGAGCTCGGGCTCAGGCTCAGGCTCAAAGCGCTTTCCGGAGGACGAACGTGCTTCGAGCAACGATATTGTGTGGCGAGAGACTACGGGCTAGGGCTTGGGCATTTCGTGTGAGGGTCTGCCGAGCGTGGGGATGCGACTTCCTGGTTGAGATGGTTGGAGAAGGGAGGTTGAGCTATTATAAGAAGGGGAAGCTGAAGGGCAAAAAGGAAGAGGAAAGTGTGAATAAAGAGAAGAAAGCCTTTGAGAGAGAAAGAAGAAGAAGAATAAGAGAAGGGTTGGGGAAAGAAGAAGACTTCAACTTGTTAGGAAACCTTTTTGCTCTCTCATCTTCTTCAAGAGATTTAGAGGATAGAGTGTTTGCGAAAAAGGGTGGCCGAGGAAGCGACAATGGCAAAGAGGTGCACTTTAGAGGGGTGAGGAAGAGGCCCTGGGGGAGGTACGCCGCCGAAATTAGAGACCCTGGGAAGAAAAGCCGGGTCTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCGCTTGCCTACGACACCGCCGCCCGACAGTTTCGAGGCGCCAAAGCGAAAACCAATTTCCCCTTGCCCGACGAGGATGTTTCCGAGCAGAAACTCAACCAAAGCCCATGCGCAAGCAGCACCGAGGAGTCCTCCTCGTCGTCGGGGATGGAGAGAGGCACGGCTAGGGGTGAGATGACGCGCTTCTGCTCCGGTGGGTTTAGGGGGCTCCCGTTCGTGCAGCCGCGGCATCCCCACATCGGGGTTGGTTGCGGTTCTGCGGCTGGGAGCGTGGCCAATGCACATCCGATTCTGTTCGTGACCCAAGGCTATCCGATAAGGTTCGACCTGGCCACGATGGATTTGACAACCGGTTTCGGCGGGAATAAGAAGGAGACATCATCCCTCGCCGATTTCAAGGCGGCGAAAGTGGTTAACCTTGAACTTAACCTTGCTCCGCCCATGGACGCCTAA 1011 55.79 MKAKRDRERAGVDDEGARAQAQAQSAFRRTNVLRATILCGERLRARAWAFRVRVCRAWGCDFLVEMVGEGRLSYYKKGKLKGKKEEESVNKEKKAFERERRRRIREGLGKEEDFNLLGNLFALSSSSRDLEDRVFAKKGGRGSDNGKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAALAYDTAARQFRGAKAKTNFPLPDEDVSEQKLNQSPCASSTEESSSSSGMERGTARGEMTRFCSGGFRGLPFVQPRHPHIGVGCGSAAGSVANAHPILFVTQGYPIRFDLATMDLTTGFGGNKKETSSLADFKAAKVVNLELNLAPPMDA 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 20956256 20966138 + BLOR05637 Blo13g00356 68751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00356 336 PRINTS Ethylene responsive element binding protein signature 151 162 IPR001471 GO:0003700|GO:0006355
Blo13g00356 336 PRINTS Ethylene responsive element binding protein signature 173 189 IPR001471 GO:0003700|GO:0006355
Blo13g00356 336 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 148 234 - -
Blo13g00356 336 CDD AP2 150 207 IPR001471 GO:0003700|GO:0006355
Blo13g00356 336 Pfam AP2 domain 150 199 IPR001471 GO:0003700|GO:0006355
Blo13g00356 336 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 148 234 - -
Blo13g00356 336 MobiDBLite consensus disorder prediction 214 239 - -
Blo13g00356 336 Gene3D AP2/ERF domain 149 208 IPR036955 GO:0003700|GO:0006355
Blo13g00356 336 SUPERFAMILY DNA-binding domain 150 208 IPR016177 GO:0003677
Blo13g00356 336 SMART rav1_2 150 213 IPR001471 GO:0003700|GO:0006355
Blo13g00356 336 MobiDBLite consensus disorder prediction 205 241 - -
Blo13g00356 336 ProSiteProfiles AP2/ERF domain profile. 150 207 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g01217 Blo13g00356 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00671 Blo-Chr3:28315123 Blo13g00356 Blo-Chr13:20956256 1.54E-32 dispersed
Blo13g00356 Blo-Chr13:20956256 Blo14g00403 Blo-Chr14:4414952 2.64E-27 dispersed
Blo13g00356 Blo-Chr13:20956256 Blo03g01556 Blo-Chr3:43268014 2.77E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13134 PF00847 AP2 5.90E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00356 K09286 - csv:101210659 194.126