Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00360 ATGCAAAAATGCGTCTTAAACTCACTTTGCAGTGATGTTGTGGACACAGACTATGGAAGTGCGGACAGGGCGGACGCCTTGAGACAGCGTCCGAATGAATCTGTCTCAAAACCGGTGTGTTGCGGACGATTGAGGATGCTGCGGACGACTAAAGGTAACGAGGGGATTATGCCAAAAGTTAAGGAAGAGGTCATTCTGGTGGAGCCTGTGATTGGAGAGGCAGAGAGAAAGGGTAGAAATGGAGAAGAATTTCTCTCGGGTATGCTGAAGGAGCTGAACCGTGGGGCTGCTGTCCCTGCTTGTGTGTTCTTCATTCTGTACACGTACGCGCGGAGTCTTCGAGCCATGAATAAGCAGTTGATGAGAGATTGGCACGCGCGAGCTTGTGGTTGGCTAGGCTATGAGAAGTTACCTTCTTGGGTCATAATCATGGCAGATGGATCACAGTATCCATCAATATATCAGAAGATATCTGGGAAGTCCTACCGGATTGGTAGAATTTCTCCCAACTTCCAGACGAGGGATTATTCTTCAACTGGTGTATATCTCAATAGAAGTCTGCAGAGTCCTCCACATCCAGCCTTCCAAGGCTCTGGTTTGGCTGTTGCCTCATCAATTTCTTCCATTTATATACAAGCTCCGGCAGAGAAAGGTATTCAAGGCTTTCTTATTGATTTTCTAATGGGAGGGGTGTCTGCTGCCGTATCCAAATCGGCAGCTGCTCCCATAGAGCGAGTTAAATTGCTTATTCAAAATCAAGATGAGATGATTAAAACCGGCCGCTTATCTGAGCCTTATAAGGGAATTACTGATTGCTTTGCAAGAACTGTTAAGGATGAAGGCGTCTTATCTCTTTGGAGGGGGAACAGCACTAATGTCATCAGATATTTCCCAACGCAGGCCTTGAATTTTGCGTTCAAGGATTACTTCAAGAGGTTGTTCAACTTCAAAAAAGACAGAGATGGCTACTGGAAATGGTTTGCTGGGAACTTGGCATCTGGTGGCGCAGCTGGTGCTTCTTCTCTTTTGTTTGTTTATTCCTTGGACTATGCTAGAACACGTCTGGCAAATGATGCTAAGTCTGCTAAAAAGGGCGGCGAAAGACAGTTTAATGGTTTAATTGATGTTTACAAGAAAACACTTAAATCTGATGGCATTGCTGGACTTTATCGTGGCTTTAATATCTCATGCATTGGAATTATTGTATACCGTGGGCTTTATTTTGGAATGTATGACTCTCTGAAACCGGTTGTTCTGGTTGGTGGACTAGAGGACAGTTTCCTTGCTAGTTTCTTGCTTGGATGGGGTATCACAATAGGTGCAGGATTGGCCTCTTACCCAATCGACACAGTGCGAAGAAGGATGATGATGACCTCGGGAGAAGCTGTAAAATACAAAAGCTCATTGGACGCATTCAACCAAATCGTCCAGAAAGAAGGTGCAAAGTCCCTCTTCAAAGGTGCCGGAGCAAACATATTGCGTGCTGTCGCGGGTGCTGGTGTGCTAGCTGGCTATGATAAGCTGCAGCTAGTCGTGTTTGGCAAGAAATATGGATCTGGCGGTGGCGCAAAGAAATTGGCGTTCAAAAGTGGGAAGGCAACGGTGGAAGTTGTGCAAGCCACGGCGGTGGACGATGAGCAACCCGCGGCGGTGAACGATGAGCAACCTGCGGCGGTGCAACACGAAGACACCGTGGCGGTGCAACCTGAACCCGAGCCTGAACAAGGAGAAGCCGGAGGCTTAGTGATCCCGTTCCAACCAGTTACAGCGGGTTTAAGGTCCAAATTATTTAGGACAGCGAATTGCAAAACACGGTATGAAGATGATCTACAACACCGTGCAATTATTGTTTCCAAAATAGTAGATTTCGACTCCTTGGCAGGAATGAGAATTAAACAACTACTTGAAGATGCTGGATTAGCCGGGTTCACCGGTATCGTAAGCCGCCAACCTGCTCCTCCAGCCGTGCCTGCTGAGGTGCAAGGGACCAATAAGTTCGAGCCTCCGCCCCTTAGAACTGTGCGCGTGGCTCGGGATTTGATAGACATGTTCAAGAACTATGTCCAGGAAAATACTCGGAAGAACATAGAGATGTGCGCAGTTCTTGGGGGAAATGTGATGGGCGATGATTACGTCTTCACTGATATCATCTTCCATGAGCAAGTCGGGACGCCAGATACGTGCTATGCTGTCGATGACGTAGCCGTTTTTGAGTTTCATCAAGAAAACCGTCTACTCTCATTAGGGTGGATTCACACACACCCGAAGCATAGTTGTTTTATGTTCTCCATTGACCTGCACACTCAATTCGCTTATCAGGTATTGATGCTGGAAGCAATCTCCATCAGCGTAGCTCCCACTGATAAACAGCGCCCGTACGGCTTCTTTCGGTGTACGAGTGCGGGGATGAGGGTGATGCGACAGTGCACTATTCCAGAACAATTCCACGAGCACGACGTTGCAACCTTTGAGTATGAGAGTCCGTTGTTAGACACAGTAGAGTCGGTATTCCTTGACCCGCACTTATCTTTTGCGGTCAAGGATTTGAGGCTGAAACGAACCAGAAAGAAGAAGGCGGCGTAA 2583 47.35 MQKCVLNSLCSDVVDTDYGSADRADALRQRPNESVSKPVCCGRLRMLRTTKGNEGIMPKVKEEVILVEPVIGEAERKGRNGEEFLSGMLKELNRGAAVPACVFFILYTYARSLRAMNKQLMRDWHARACGWLGYEKLPSWVIIMADGSQYPSIYQKISGKSYRIGRISPNFQTRDYSSTGVYLNRSLQSPPHPAFQGSGLAVASSISSIYIQAPAEKGIQGFLIDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKTGRLSEPYKGITDCFARTVKDEGVLSLWRGNSTNVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFNISCIGIIVYRGLYFGMYDSLKPVVLVGGLEDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQIVQKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLVVFGKKYGSGGGAKKLAFKSGKATVEVVQATAVDDEQPAAVNDEQPAAVQHEDTVAVQPEPEPEQGEAGGLVIPFQPVTAGLRSKLFRTANCKTRYEDDLQHRAIIVSKIVDFDSLAGMRIKQLLEDAGLAGFTGIVSRQPAPPAVPAEVQGTNKFEPPPLRTVRVARDLIDMFKNYVQENTRKNIEMCAVLGGNVMGDDYVFTDIIFHEQVGTPDTCYAVDDVAVFEFHQENRLLSLGWIHTHPKHSCFMFSIDLHTQFAYQVLMLEAISISVAPTDKQRPYGFFRCTSAGMRVMRQCTIPEQFHEHDVATFEYESPLLDTVESVFLDPHLSFAVKDLRLKRTRKKKAA 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 21128221 21147329 + BLOR05641 Blo13g00360 68755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00360 860 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 672 773 IPR000555 GO:0005515|GO:0008233|GO:0008237
Blo13g00360 860 ProSiteProfiles Solute carrier (Solcar) repeat profile. 425 511 IPR018108 -
Blo13g00360 860 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 146 522 - -
Blo13g00360 860 ProSiteProfiles MPN domain profile. 673 802 IPR037518 -
Blo13g00360 860 Pfam Mitochondrial carrier protein 324 417 IPR018108 -
Blo13g00360 860 Pfam Mitochondrial carrier protein 222 317 IPR018108 -
Blo13g00360 860 Pfam Mitochondrial carrier protein 426 510 IPR018108 -
Blo13g00360 860 PRINTS Mitochondrial carrier protein signature 238 252 IPR002067 GO:0055085
Blo13g00360 860 PRINTS Mitochondrial carrier protein signature 225 238 IPR002067 GO:0055085
Blo13g00360 860 PRINTS Mitochondrial carrier protein signature 390 408 IPR002067 GO:0055085
Blo13g00360 860 PRINTS Mitochondrial carrier protein signature 288 308 IPR002067 GO:0055085
Blo13g00360 860 PRINTS Mitochondrial carrier protein signature 434 456 IPR002067 GO:0055085
Blo13g00360 860 PRINTS Mitochondrial carrier protein signature 340 358 IPR002067 GO:0055085
Blo13g00360 860 SMART pad1_6 673 801 IPR000555 GO:0005515|GO:0008233|GO:0008237
Blo13g00360 860 ProSiteProfiles Solute carrier (Solcar) repeat profile. 325 417 IPR018108 -
Blo13g00360 860 PRINTS Adenine nucleotide translocator signature 266 287 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo13g00360 860 PRINTS Adenine nucleotide translocator signature 299 311 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo13g00360 860 PRINTS Adenine nucleotide translocator signature 325 338 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo13g00360 860 PRINTS Adenine nucleotide translocator signature 430 446 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo13g00360 860 PRINTS Adenine nucleotide translocator signature 222 234 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo13g00360 860 SUPERFAMILY JAB1/MPN domain 672 799 - -
Blo13g00360 860 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 146 522 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo13g00360 860 Gene3D Mitochondrial carrier domain 223 518 IPR023395 -
Blo13g00360 860 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 313 IPR018108 -
Blo13g00360 860 Gene3D Cytidine Deaminase, domain 2 659 852 - -
Blo13g00360 860 SUPERFAMILY Mitochondrial carrier 221 507 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00524 Blo-Chr2:8650978 Blo13g00360 Blo-Chr13:21128221 6.50E-117 dispersed
Blo05g00204 Blo-Chr5:2078225 Blo13g00360 Blo-Chr13:21128221 1.84E-178 dispersed
Blo05g00623 Blo-Chr5:18426156 Blo13g00360 Blo-Chr13:21128221 3.14E-35 dispersed
Blo06g00342 Blo-Chr6:20548002 Blo13g00360 Blo-Chr13:21128221 1.55E-56 dispersed
Blo06g00605 Blo-Chr6:28816334 Blo13g00360 Blo-Chr13:21128221 0 dispersed
Blo09g00225 Blo-Chr9:10141037 Blo13g00360 Blo-Chr13:21128221 2.78E-109 dispersed
Blo10g00123 Blo-Chr10:1324276 Blo13g00360 Blo-Chr13:21128221 2.38E-138 dispersed
Blo11g00987 Blo-Chr11:24229151 Blo13g00360 Blo-Chr13:21128221 1.52E-41 dispersed
Blo13g00360 Blo-Chr13:21128221 Blo16g00162 Blo-Chr16:3689663 3.68E-126 dispersed
Blo17g00628 Blo-Chr17:13940059 Blo13g00360 Blo-Chr13:21128221 1.46E-45 dispersed
Blo13g00360 Blo-Chr13:21128221 Blo07g00643 Blo-Chr7:21090604 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00360 K05863 - csin:114307395 618.231